RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 STIM1Q13586 685 aa15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 HIP1O00291 1037 aa15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 BRPF1P55201 1214 aaPredicted RBP15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 MPNDQ8N594 471 aa15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 KIF3BO15066 747 aa15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 CCDC181Q5TID7 509 aa15.68■□□□□ 0.1
SRGAP3-201ENST00000360413 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
SRGAP3-201ENST00000360413 CCDC192P0DO97 292 aa15.67■□□□□ 0.1
SRGAP3-201ENST00000360413 JMYQ8N9B5 988 aa15.67■□□□□ 0.1
SRGAP3-201ENST00000360413 IBSPP21815 317 aaPredicted RBP15.67■□□□□ 0.1
SRGAP3-201ENST00000360413 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
SRGAP3-201ENST00000360413 MIA2Q96PC5 1412 aa15.66■□□□□ 0.1
SRGAP3-201ENST00000360413 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
SRGAP3-201ENST00000360413 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
SRGAP3-201ENST00000360413 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
SRGAP3-201ENST00000360413 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
SRGAP3-201ENST00000360413 LNPKQ9C0E8 428 aa15.65■□□□□ 0.1
SRGAP3-201ENST00000360413 PDIA4P13667 645 aaKnown RBP15.65■□□□□ 0.1
SRGAP3-201ENST00000360413 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
SRGAP3-201ENST00000360413 SERPINC1P01008 464 aa15.65■□□□□ 0.1
SRGAP3-201ENST00000360413 TRERF1Q96PN7 1200 aa15.65■□□□□ 0.1
SRGAP3-201ENST00000360413 GOLGA6L10A0A0M3HER8 536 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 TMCO3Q6UWJ1 677 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 MCM2P49736 904 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 TNNT1P13805 278 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 DACH1Q9UI36 760 aa15.64■□□□□ 0.09
SRGAP3-201ENST00000360413 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
SRGAP3-201ENST00000360413 CDC45O75419 566 aa15.63■□□□□ 0.09
SRGAP3-201ENST00000360413 ZSCAN30Q86W11 494 aa15.63■□□□□ 0.09
SRGAP3-201ENST00000360413 FIBPO43427 364 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 NF2P35240 595 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 PPM1EQ8WY54 764 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 CCDC91Q7Z6B0 441 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 PPFIBP1Q86W92 1011 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 CUX2O14529 1486 aa15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
SRGAP3-201ENST00000360413 IKQ13123 557 aaPredicted RBP15.61■□□□□ 0.09
SRGAP3-201ENST00000360413 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
SRGAP3-201ENST00000360413 STAMBPO95630 424 aa15.61■□□□□ 0.09
SRGAP3-201ENST00000360413 UBXN4Q92575 508 aa15.61■□□□□ 0.09
SRGAP3-201ENST00000360413 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
SRGAP3-201ENST00000360413 SEPT11Q9NVA2 429 aaKnown RBP15.61■□□□□ 0.09
SRGAP3-201ENST00000360413 FAM107BQ9H098 131 aa15.6■□□□□ 0.09
SRGAP3-201ENST00000360413 TNMDQ9H2S6 317 aa15.6■□□□□ 0.09
SRGAP3-201ENST00000360413 GTF2A1P52655 376 aaPredicted RBP15.6■□□□□ 0.09
SRGAP3-201ENST00000360413 GNL3LQ9NVN8 582 aaKnown RBP15.6■□□□□ 0.09
SRGAP3-201ENST00000360413 POTEJP0CG39 1038 aa15.59■□□□□ 0.09
SRGAP3-201ENST00000360413 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
SRGAP3-201ENST00000360413 ZNF396Q96N95 335 aaPredicted RBP15.59■□□□□ 0.09
SRGAP3-201ENST00000360413 CETN2P41208 172 aa15.58■□□□□ 0.09
SRGAP3-201ENST00000360413 IRX3P78415 501 aaPredicted RBP15.58■□□□□ 0.09
SRGAP3-201ENST00000360413 MAP2K1Q02750 393 aaPredicted RBP15.58■□□□□ 0.09
SRGAP3-201ENST00000360413 PANK3Q9H999 370 aa15.58■□□□□ 0.08
SRGAP3-201ENST00000360413 CFAP45Q9UL16 551 aa15.58■□□□□ 0.08
SRGAP3-201ENST00000360413 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
SRGAP3-201ENST00000360413 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
SRGAP3-201ENST00000360413 GRIPAP1Q4V328 841 aa15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 TIGD1Q96MW7 591 aa15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 SMG6Q86US8 1419 aaKnown RBP15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 WDHD1O75717 1129 aaPredicted RBP15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 KRT18P05783 430 aaKnown RBP15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 CEBPZQ03701 1054 aaKnown RBP15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 LTV1Q96GA3 475 aaPredicted RBP15.57■□□□□ 0.08
SRGAP3-201ENST00000360413 POLR3GO15318 223 aaPredicted RBP15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 ERC1Q8IUD2 1116 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 DNAJC2Q99543 621 aaKnown RBP15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 CBFA2T2O43439 604 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 NEBLO76041 1014 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 NEK4P51957 841 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 ZNF526Q8TF50 670 aaPredicted RBP15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 STAC3Q96MF2 364 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
SRGAP3-201ENST00000360413 GTF2F1P35269 517 aaKnown RBP eCLIP15.55■□□□□ 0.08
SRGAP3-201ENST00000360413 CCDC97Q96F63 343 aaPredicted RBP15.55■□□□□ 0.08
SRGAP3-201ENST00000360413 GBP3Q9H0R5 595 aa15.55■□□□□ 0.08
SRGAP3-201ENST00000360413 MICALCLQ6ZW33 695 aa15.55■□□□□ 0.08
SRGAP3-201ENST00000360413 APAF1O14727 1248 aa15.55■□□□□ 0.08
SRGAP3-201ENST00000360413 RNF187Q5TA31 235 aaPredicted RBP15.54■□□□□ 0.08
SRGAP3-201ENST00000360413 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.08
SRGAP3-201ENST00000360413 PSME1Q06323 249 aa15.54■□□□□ 0.08
SRGAP3-201ENST00000360413 ANKRD1Q15327 319 aa15.54■□□□□ 0.08
SRGAP3-201ENST00000360413 MAP9Q49MG5 647 aa15.54■□□□□ 0.08
SRGAP3-201ENST00000360413 MNAT1P51948 309 aa15.53■□□□□ 0.08
SRGAP3-201ENST00000360413 PANK1Q8TE04 598 aa15.53■□□□□ 0.08
SRGAP3-201ENST00000360413 PPP1R12BO60237 982 aaPredicted RBP15.53■□□□□ 0.08
SRGAP3-201ENST00000360413 CEP63Q96MT8 703 aa15.53■□□□□ 0.08
SRGAP3-201ENST00000360413 PTPN14Q15678 1187 aa15.53■□□□□ 0.08
SRGAP3-201ENST00000360413 KIF6Q6ZMV9 814 aa15.52■□□□□ 0.08
SRGAP3-201ENST00000360413 BMP2KQ9NSY1 1161 aaPredicted RBP15.52■□□□□ 0.08
SRGAP3-201ENST00000360413 KIF2AO00139 706 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms