RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 U2AF1L5P0DN76 240 aaPredicted RBP23.91■■□□□ 1.42
PDLIM7-203ENST00000359895 LTKP29376 864 aa23.91■■□□□ 1.42
PDLIM7-203ENST00000359895 U2AF1Q01081 240 aaKnown RBP eCLIP23.91■■□□□ 1.424e-6■■□□□ 12.1
PDLIM7-203ENST00000359895 PLIN1O60240 522 aa23.9■■□□□ 1.42
PDLIM7-203ENST00000359895 NUDT16Q96DE0 195 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-203ENST00000359895 PNPLA6Q8IY17 1366 aa23.89■■□□□ 1.42
PDLIM7-203ENST00000359895 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.89■■□□□ 1.42
PDLIM7-203ENST00000359895 SPINK5Q9NQ38 1064 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-203ENST00000359895 CCDC61Q9Y6R9 512 aa23.89■■□□□ 1.41
PDLIM7-203ENST00000359895 SETD1BQ9UPS6 1966 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-203ENST00000359895 TOPAZ1Q8N9V7 1692 aa23.88■■□□□ 1.41
PDLIM7-203ENST00000359895 ROBO2Q9HCK4 1378 aa23.88■■□□□ 1.41
PDLIM7-203ENST00000359895 THEMISQ8N1K5 641 aaPredicted RBP23.87■■□□□ 1.41
PDLIM7-203ENST00000359895 PNNQ9H307 717 aaKnown RBP23.87■■□□□ 1.41
PDLIM7-203ENST00000359895 CRBNQ96SW2 442 aa23.86■■□□□ 1.41
PDLIM7-203ENST00000359895 DIAPH1O60610 1272 aaKnown RBP23.85■■□□□ 1.41
PDLIM7-203ENST00000359895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
PDLIM7-203ENST00000359895 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
PDLIM7-203ENST00000359895 TBX22Q9Y458 520 aa23.84■■□□□ 1.41
PDLIM7-203ENST00000359895 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
PDLIM7-203ENST00000359895 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
PDLIM7-203ENST00000359895 ZNF142P52746 1687 aaPredicted RBP23.83■■□□□ 1.41
PDLIM7-203ENST00000359895 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
PDLIM7-203ENST00000359895 NEUROD2Q15784 382 aa23.82■■□□□ 1.4
PDLIM7-203ENST00000359895 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
PDLIM7-203ENST00000359895 PTCH1Q13635 1447 aa23.81■■□□□ 1.4
PDLIM7-203ENST00000359895 PTPRUQ92729 1446 aa23.81■■□□□ 1.4
PDLIM7-203ENST00000359895 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
PDLIM7-203ENST00000359895 CEP170BQ9Y4F5 1589 aaPredicted RBP23.81■■□□□ 1.4
PDLIM7-203ENST00000359895 AATKQ6ZMQ8 1374 aa23.8■■□□□ 1.4
PDLIM7-203ENST00000359895 NRKQ7Z2Y5 1582 aa23.8■■□□□ 1.4
PDLIM7-203ENST00000359895 MAPK8IP3Q9UPT6 1336 aa23.8■■□□□ 1.4
PDLIM7-203ENST00000359895 MYH16Q9H6N6 1097 aa23.79■■□□□ 1.4
PDLIM7-203ENST00000359895 CDK12Q9NYV4 1490 aaPredicted RBP23.78■■□□□ 1.4
PDLIM7-203ENST00000359895 PRR36Q9H6K5 1346 aa23.78■■□□□ 1.4
PDLIM7-203ENST00000359895 XRN1Q8IZH2 1706 aaKnown RBP23.78■■□□□ 1.4
PDLIM7-203ENST00000359895 C20orf194Q5TEA3 1177 aa23.78■■□□□ 1.4
PDLIM7-203ENST00000359895 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
PDLIM7-203ENST00000359895 SLC26A8Q96RN1 970 aa23.77■■□□□ 1.4
PDLIM7-203ENST00000359895 COG3Q96JB2 828 aa23.76■■□□□ 1.39
PDLIM7-203ENST00000359895 PLEKHG3A1L390 1219 aa23.75■■□□□ 1.39
PDLIM7-203ENST00000359895 FCHSD2O94868 740 aa23.75■■□□□ 1.39
PDLIM7-203ENST00000359895 TMPOP42166 694 aaKnown RBP23.75■■□□□ 1.39
PDLIM7-203ENST00000359895 NME9Q86XW9 330 aa23.75■■□□□ 1.39
PDLIM7-203ENST00000359895 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
PDLIM7-203ENST00000359895 FANCIQ9NVI1 1328 aa23.74■■□□□ 1.39
PDLIM7-203ENST00000359895 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
PDLIM7-203ENST00000359895 PIK3R4Q99570 1358 aa23.73■■□□□ 1.39
PDLIM7-203ENST00000359895 IL16Q14005 1332 aa23.73■■□□□ 1.39
PDLIM7-203ENST00000359895 BCAR3O75815 825 aa23.73■■□□□ 1.39
PDLIM7-203ENST00000359895 PDE3AQ14432 1141 aa23.73■■□□□ 1.39
PDLIM7-203ENST00000359895 NCKAP5LQ9HCH0 1330 aa23.72■■□□□ 1.39
PDLIM7-203ENST00000359895 HSPA2P54652 639 aa23.72■■□□□ 1.39
PDLIM7-203ENST00000359895 TCERG1O14776 1098 aaKnown RBP23.71■■□□□ 1.39
PDLIM7-203ENST00000359895 NEFMP07197 916 aa23.71■■□□□ 1.39
PDLIM7-203ENST00000359895 CT47B1P0C2W7 299 aaPredicted RBP23.71■■□□□ 1.39
PDLIM7-203ENST00000359895 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
PDLIM7-203ENST00000359895 PPM1GO15355 546 aaPredicted RBP23.69■■□□□ 1.38
PDLIM7-203ENST00000359895 USP6P35125 1406 aa23.69■■□□□ 1.38
PDLIM7-203ENST00000359895 ACEP12821 1306 aa23.68■■□□□ 1.38
PDLIM7-203ENST00000359895 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
PDLIM7-203ENST00000359895 RARSP54136 660 aaKnown RBP23.68■■□□□ 1.38
PDLIM7-203ENST00000359895 TRIM35Q9UPQ4 493 aa23.68■■□□□ 1.38
PDLIM7-203ENST00000359895 RSPH6AQ9H0K4 717 aa23.67■■□□□ 1.38
PDLIM7-203ENST00000359895 RGPD8O14715 1765 aaPredicted RBP23.67■■□□□ 1.38
PDLIM7-203ENST00000359895 CANXP27824 592 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-203ENST00000359895 CENPQQ7L2Z9 268 aaPredicted RBP23.66■■□□□ 1.38
PDLIM7-203ENST00000359895 EMILIN1Q9Y6C2 1016 aa23.66■■□□□ 1.38
PDLIM7-203ENST00000359895 MS4A1P11836 297 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 RIPK4P57078 832 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 ZRANB1Q9UGI0 708 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 OVOS2A0A0J9YW53 1432 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 OVOS2Q6IE36 1432 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 IL13P35225 146 aa23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 CHD2O14647 1828 aaKnown RBP23.65■■□□□ 1.38
PDLIM7-203ENST00000359895 AAMPQ13685 434 aa23.64■■□□□ 1.37
PDLIM7-203ENST00000359895 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
PDLIM7-203ENST00000359895 ANKARQ7Z5J8 1434 aa23.63■■□□□ 1.37
PDLIM7-203ENST00000359895 TTC21AQ8NDW8 1320 aa23.63■■□□□ 1.37
PDLIM7-203ENST00000359895 FBLN1P23142 703 aa23.63■■□□□ 1.37
PDLIM7-203ENST00000359895 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
PDLIM7-203ENST00000359895 STRCQ7RTU9 1775 aa23.62■■□□□ 1.37
PDLIM7-203ENST00000359895 SSH2Q76I76 1423 aa23.62■■□□□ 1.37
PDLIM7-203ENST00000359895 NFE2L2Q16236 605 aa23.6■■□□□ 1.37
PDLIM7-203ENST00000359895 DLG5Q8TDM6 1919 aa23.6■■□□□ 1.37
PDLIM7-203ENST00000359895 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
PDLIM7-203ENST00000359895 ANKLE2Q86XL3 938 aa23.59■■□□□ 1.37
PDLIM7-203ENST00000359895 USP31Q70CQ4 1352 aa23.59■■□□□ 1.37
PDLIM7-203ENST00000359895 NUTM2FA1L443 756 aa23.57■■□□□ 1.36
PDLIM7-203ENST00000359895 RRS1Q15050 365 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-203ENST00000359895 FRAT1Q92837 279 aaPredicted RBP23.57■■□□□ 1.36
PDLIM7-203ENST00000359895 HMOX1P09601 288 aa23.55■■□□□ 1.36
PDLIM7-203ENST00000359895 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-203ENST00000359895 TSR2Q969E8 191 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-203ENST00000359895 USP54Q70EL1 1684 aa23.55■■□□□ 1.36
PDLIM7-203ENST00000359895 KCNA6P17658 529 aa23.54■■□□□ 1.36
PDLIM7-203ENST00000359895 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
PDLIM7-203ENST00000359895 PEAK1Q9H792 1746 aa23.54■■□□□ 1.36
PDLIM7-203ENST00000359895 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms