RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 AFF2P51816 1311 aa9.7□□□□□ -0.86
CCDC196-201ENST00000359454 NUP155O75694 1391 aa9.7□□□□□ -0.86
CCDC196-201ENST00000359454 MST1RQ04912 1400 aa9.7□□□□□ -0.86
CCDC196-201ENST00000359454 ATMINO43313 823 aaPredicted RBP9.69□□□□□ -0.86
CCDC196-201ENST00000359454 XRN1Q8IZH2 1706 aaKnown RBP9.69□□□□□ -0.86
CCDC196-201ENST00000359454 SETBP1Q9Y6X0 1596 aa9.69□□□□□ -0.86
CCDC196-201ENST00000359454 NHSL1Q5SYE7 1610 aa9.68□□□□□ -0.86
CCDC196-201ENST00000359454 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
CCDC196-201ENST00000359454 ASTLQ6HA08 431 aaPredicted RBP9.68□□□□□ -0.86
CCDC196-201ENST00000359454 FBXO22Q8NEZ5 403 aa9.68□□□□□ -0.86
CCDC196-201ENST00000359454 NRXN3Q9Y4C0 1643 aa9.67□□□□□ -0.86
CCDC196-201ENST00000359454 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
CCDC196-201ENST00000359454 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
CCDC196-201ENST00000359454 VSIG10Q8N0Z9 540 aa9.67□□□□□ -0.86
CCDC196-201ENST00000359454 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
CCDC196-201ENST00000359454 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
CCDC196-201ENST00000359454 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
CCDC196-201ENST00000359454 ADGRL3Q9HAR2 1447 aa9.66□□□□□ -0.86
CCDC196-201ENST00000359454 METP08581 1390 aa9.66□□□□□ -0.86
CCDC196-201ENST00000359454 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
CCDC196-201ENST00000359454 RGS12O14924 1447 aa9.65□□□□□ -0.86
CCDC196-201ENST00000359454 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
CCDC196-201ENST00000359454 DDX17Q92841 729 aaKnown RBP9.64□□□□□ -0.87
CCDC196-201ENST00000359454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC196-201ENST00000359454 SPHKAPQ2M3C7 1700 aa9.64□□□□□ -0.87
CCDC196-201ENST00000359454 ITGAEP38570 1179 aa9.63□□□□□ -0.87
CCDC196-201ENST00000359454 C1orf167Q5SNV9 1468 aa9.62□□□□□ -0.87
CCDC196-201ENST00000359454 ADAMTS2O95450 1211 aa9.62□□□□□ -0.87
CCDC196-201ENST00000359454 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
CCDC196-201ENST00000359454 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
CCDC196-201ENST00000359454 ATAD2Q6PL18 1390 aa9.62□□□□□ -0.87
CCDC196-201ENST00000359454 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
CCDC196-201ENST00000359454 SOS2Q07890 1332 aaPredicted RBP9.61□□□□□ -0.87
CCDC196-201ENST00000359454 LAMC1P11047 1609 aa9.61□□□□□ -0.87
CCDC196-201ENST00000359454 PPP1R37O75864 691 aa9.61□□□□□ -0.87
CCDC196-201ENST00000359454 USP21Q9UK80 565 aa9.61□□□□□ -0.87
CCDC196-201ENST00000359454 TRPC5Q9UL62 973 aaPredicted RBP9.61□□□□□ -0.87
CCDC196-201ENST00000359454 PTCH1Q13635 1447 aa9.61□□□□□ -0.87
CCDC196-201ENST00000359454 IER5LQ5T953 404 aa9.6□□□□□ -0.87
CCDC196-201ENST00000359454 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
CCDC196-201ENST00000359454 CLTCL1P53675 1640 aa9.6□□□□□ -0.87
CCDC196-201ENST00000359454 FNBP4Q8N3X1 1017 aaPredicted RBP9.59□□□□□ -0.87
CCDC196-201ENST00000359454 ORAI2Q96SN7 254 aa9.59□□□□□ -0.87
CCDC196-201ENST00000359454 PRAG1Q86YV5 1406 aa9.58□□□□□ -0.88
CCDC196-201ENST00000359454 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
CCDC196-201ENST00000359454 RPGRIP1LQ68CZ1 1315 aa9.57□□□□□ -0.88
CCDC196-201ENST00000359454 ATRNO75882 1429 aa9.57□□□□□ -0.88
CCDC196-201ENST00000359454 KIF1BO60333 1816 aa9.57□□□□□ -0.88
CCDC196-201ENST00000359454 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
CCDC196-201ENST00000359454 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
CCDC196-201ENST00000359454 IRX5P78411 483 aaPredicted RBP9.56□□□□□ -0.88
CCDC196-201ENST00000359454 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
CCDC196-201ENST00000359454 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
CCDC196-201ENST00000359454 MYOM2P54296 1465 aa9.55□□□□□ -0.88
CCDC196-201ENST00000359454 PLCG2P16885 1265 aa9.55□□□□□ -0.88
CCDC196-201ENST00000359454 OCEL1Q9H607 264 aa9.55□□□□□ -0.88
CCDC196-201ENST00000359454 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
CCDC196-201ENST00000359454 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
CCDC196-201ENST00000359454 PDCD7Q8N8D1 485 aaKnown RBP9.54□□□□□ -0.88
CCDC196-201ENST00000359454 SLC39A7Q92504 469 aa9.54□□□□□ -0.88
CCDC196-201ENST00000359454 CDC42BPGQ6DT37 1551 aa9.54□□□□□ -0.88
CCDC196-201ENST00000359454 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
CCDC196-201ENST00000359454 LRPPRCP42704 1394 aaKnown RBP9.53□□□□□ -0.88
CCDC196-201ENST00000359454 SEC24BO95487 1268 aa9.53□□□□□ -0.88
CCDC196-201ENST00000359454 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
CCDC196-201ENST00000359454 GJD4Q96KN9 370 aaPredicted RBP9.53□□□□□ -0.88
CCDC196-201ENST00000359454 NAIPQ13075 1403 aa9.53□□□□□ -0.88
CCDC196-201ENST00000359454 PXDNQ92626 1479 aa9.53□□□□□ -0.88
CCDC196-201ENST00000359454 C7P10643 843 aa9.52□□□□□ -0.89
CCDC196-201ENST00000359454 FOXO3O43524 673 aa9.51□□□□□ -0.89
CCDC196-201ENST00000359454 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
CCDC196-201ENST00000359454 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
CCDC196-201ENST00000359454 PPLO60437 1756 aa9.5□□□□□ -0.89
CCDC196-201ENST00000359454 XPCQ01831 940 aaPredicted RBP9.5□□□□□ -0.89
CCDC196-201ENST00000359454 UNC5CLQ8IV45 518 aa9.5□□□□□ -0.89
CCDC196-201ENST00000359454 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
CCDC196-201ENST00000359454 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
CCDC196-201ENST00000359454 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.49□□□□□ -0.89
CCDC196-201ENST00000359454 TECPR2O15040 1411 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
CCDC196-201ENST00000359454 RALGAPBQ86X10 1494 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 SLIT2O94813 1529 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 NUTM2FA1L443 756 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 G3V3G9 751 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 WAPLQ7Z5K2 1190 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 STK26Q9P289 416 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 COLQQ9Y215 455 aaPredicted RBP9.48□□□□□ -0.89
CCDC196-201ENST00000359454 SPATA31A3Q5VYP0 1347 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 ADGRF5Q8IZF2 1346 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 ABCC11Q96J66 1382 aa9.48□□□□□ -0.89
CCDC196-201ENST00000359454 ANKRD30BQ9BXX2 1392 aa9.47□□□□□ -0.89
CCDC196-201ENST00000359454 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
CCDC196-201ENST00000359454 GLI3P10071 1580 aa9.46□□□□□ -0.89
CCDC196-201ENST00000359454 KIF1AQ12756 1690 aa9.46□□□□□ -0.89
CCDC196-201ENST00000359454 SF3B2Q13435 895 aaKnown RBP9.46□□□□□ -0.9
CCDC196-201ENST00000359454 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.9
CCDC196-201ENST00000359454 MICALL2Q8IY33 904 aa9.46□□□□□ -0.9
CCDC196-201ENST00000359454 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
CCDC196-201ENST00000359454 BOLA1Q9Y3E2 137 aa9.46□□□□□ -0.9
CCDC196-201ENST00000359454 PSME1Q06323 249 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms