RNA–Protein interactions for RNA: ENST00000359087.8

NAE1-202, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2 BASIC

Gene NAE1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-202ENST00000359087 MAP2P11137 1827 aaKnown RBP29.85■■■□□ 2.37
NAE1-202ENST00000359087 TTC21BQ7Z4L5 1316 aa29.85■■■□□ 2.37
NAE1-202ENST00000359087 SSH2Q76I76 1423 aa29.84■■■□□ 2.37
NAE1-202ENST00000359087 CFAP53Q96M91 514 aa29.82■■■□□ 2.36
NAE1-202ENST00000359087 ADAMTS8Q9UP79 889 aa29.82■■■□□ 2.36
NAE1-202ENST00000359087 NCOA3Q9Y6Q9 1424 aa29.82■■■□□ 2.36
NAE1-202ENST00000359087 SCAF1Q9H7N4 1312 aaKnown RBP29.82■■■□□ 2.36
NAE1-202ENST00000359087 COG3Q96JB2 828 aa29.81■■■□□ 2.36
NAE1-202ENST00000359087 TMEM94Q12767 1356 aa29.81■■■□□ 2.36
NAE1-202ENST00000359087 C19orf44Q9H6X5 657 aa29.79■■■□□ 2.36
NAE1-202ENST00000359087 PHF8Q9UPP1 1060 aa29.79■■■□□ 2.36
NAE1-202ENST00000359087 TTC21AQ8NDW8 1320 aa29.79■■■□□ 2.36
NAE1-202ENST00000359087 XIRP1Q702N8 1843 aaKnown RBP29.79■■■□□ 2.36
NAE1-202ENST00000359087 ZRANB1Q9UGI0 708 aa29.78■■■□□ 2.36
NAE1-202ENST00000359087 OVOS2A0A0J9YW53 1432 aa29.76■■■□□ 2.35
NAE1-202ENST00000359087 OVOS2Q6IE36 1432 aa29.76■■■□□ 2.35
NAE1-202ENST00000359087 PIK3C2AO00443 1686 aa29.76■■■□□ 2.35
NAE1-202ENST00000359087 DCCP43146 1447 aa29.75■■■□□ 2.35
NAE1-202ENST00000359087 AATKQ6ZMQ8 1374 aa29.74■■■□□ 2.35
NAE1-202ENST00000359087 ESCO1Q5FWF5 840 aa29.74■■■□□ 2.35
NAE1-202ENST00000359087 COL3A1P02461 1466 aaPredicted RBP29.74■■■□□ 2.35
NAE1-202ENST00000359087 KIF1AQ12756 1690 aa29.73■■■□□ 2.35
NAE1-202ENST00000359087 SENP3-EIF4A1A0A087X0R7 540 aa29.71■■■□□ 2.35
NAE1-202ENST00000359087 USP54Q70EL1 1684 aa29.71■■■□□ 2.35
NAE1-202ENST00000359087 SMG6Q86US8 1419 aaKnown RBP29.7■■■□□ 2.35
NAE1-202ENST00000359087 C1orf167Q5SNV9 1468 aa29.7■■■□□ 2.34
NAE1-202ENST00000359087 POLKQ9UBT6 870 aa29.69■■■□□ 2.34
NAE1-202ENST00000359087 PNPLA6Q8IY17 1366 aa29.69■■■□□ 2.34
NAE1-202ENST00000359087 ATF3P18847 181 aa29.68■■■□□ 2.34
NAE1-202ENST00000359087 FBLN1P23142 703 aa29.68■■■□□ 2.34
NAE1-202ENST00000359087 USP31Q70CQ4 1352 aa29.68■■■□□ 2.34
NAE1-202ENST00000359087 ZNF335Q9H4Z2 1342 aaPredicted RBP29.67■■■□□ 2.34
NAE1-202ENST00000359087 LRRC7Q96NW7 1537 aa29.67■■■□□ 2.34
NAE1-202ENST00000359087 MARF1Q9Y4F3 1742 aaKnown RBP29.67■■■□□ 2.34
NAE1-202ENST00000359087 DMRT2Q9Y5R5 561 aa29.67■■■□□ 2.34
NAE1-202ENST00000359087 MST1RQ04912 1400 aa29.67■■■□□ 2.34
NAE1-202ENST00000359087 MSH6P52701 1360 aa29.66■■■□□ 2.34
NAE1-202ENST00000359087 CDK12Q9NYV4 1490 aaPredicted RBP29.66■■■□□ 2.34
NAE1-202ENST00000359087 ORAI2Q96SN7 254 aa29.66■■■□□ 2.34
NAE1-202ENST00000359087 CADPS2Q86UW7 1296 aa29.63■■■□□ 2.33
NAE1-202ENST00000359087 CCDC146Q8IYE0 955 aa29.63■■■□□ 2.33
NAE1-202ENST00000359087 NUDCQ9Y266 331 aa29.63■■■□□ 2.33
NAE1-202ENST00000359087 EMILIN1Q9Y6C2 1016 aa29.63■■■□□ 2.33
NAE1-202ENST00000359087 PPM1GO15355 546 aaPredicted RBP29.62■■■□□ 2.33
NAE1-202ENST00000359087 PSME1Q06323 249 aa29.62■■■□□ 2.33
NAE1-202ENST00000359087 SALL2Q9Y467 1007 aaPredicted RBP29.62■■■□□ 2.33
NAE1-202ENST00000359087 DIAPH1O60610 1272 aaKnown RBP29.61■■■□□ 2.33
NAE1-202ENST00000359087 PAK3O75914 559 aaPredicted RBP29.61■■■□□ 2.33
NAE1-202ENST00000359087 GTF3C3Q9Y5Q9 886 aa29.61■■■□□ 2.33
NAE1-202ENST00000359087 RRS1Q15050 365 aaKnown RBP29.6■■■□□ 2.33
NAE1-202ENST00000359087 TRPM3Q9HCF6 1732 aaPredicted RBP29.59■■■□□ 2.33
NAE1-202ENST00000359087 ABTB2Q8N961 1025 aa29.59■■■□□ 2.33
NAE1-202ENST00000359087 U2AF1L5P0DN76 240 aaPredicted RBP29.58■■■□□ 2.33
NAE1-202ENST00000359087 NLRP6P59044 892 aa29.58■■■□□ 2.33
NAE1-202ENST00000359087 U2AF1Q01081 240 aaKnown RBP eCLIP29.58■■■□□ 2.331e-6■■■■□ 22.5
NAE1-202ENST00000359087 FOXO3O43524 673 aa29.57■■■□□ 2.32
NAE1-202ENST00000359087 U2SURPO15042 1029 aaKnown RBP29.56■■■□□ 2.32
NAE1-202ENST00000359087 PEAK1Q9H792 1746 aa29.56■■■□□ 2.32
NAE1-202ENST00000359087 RUNDC1Q96C34 613 aa29.55■■■□□ 2.32
NAE1-202ENST00000359087 APAF1O14727 1248 aa29.54■■■□□ 2.32
NAE1-202ENST00000359087 PDE3BQ13370 1112 aa29.54■■■□□ 2.32
NAE1-202ENST00000359087 SOX12O15370 315 aa29.52■■■□□ 2.32
NAE1-202ENST00000359087 NUTM2GQ5VZR2 741 aa29.52■■■□□ 2.32
NAE1-202ENST00000359087 IQSEC2Q5JU85 1478 aa29.51■■■□□ 2.32
NAE1-202ENST00000359087 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
NAE1-202ENST00000359087 KRT28Q7Z3Y7 464 aa29.49■■■□□ 2.31
NAE1-202ENST00000359087 LTN1O94822 1766 aa29.49■■■□□ 2.31
NAE1-202ENST00000359087 XPCQ01831 940 aaPredicted RBP29.48■■■□□ 2.31
NAE1-202ENST00000359087 ALS2Q96Q42 1657 aa29.48■■■□□ 2.31
NAE1-202ENST00000359087 IL13P35225 146 aa29.48■■■□□ 2.31
NAE1-202ENST00000359087 MAP3K19Q56UN5 1328 aa29.47■■■□□ 2.31
NAE1-202ENST00000359087 SBNO1A3KN83 1393 aa29.46■■■□□ 2.31
NAE1-202ENST00000359087 ZNF521Q96K83 1311 aa29.45■■■□□ 2.31
NAE1-202ENST00000359087 PNNQ9H307 717 aaKnown RBP29.45■■■□□ 2.3
NAE1-202ENST00000359087 FLT4P35916 1363 aa29.44■■■□□ 2.3
NAE1-202ENST00000359087 TCP11L2Q8N4U5 519 aa29.44■■■□□ 2.3
NAE1-202ENST00000359087 NPHP3Q7Z494 1330 aa29.43■■■□□ 2.3
NAE1-202ENST00000359087 NFAT5O94916 1531 aa29.43■■■□□ 2.3
NAE1-202ENST00000359087 PLEKHF1Q96S99 279 aa29.43■■■□□ 2.3
NAE1-202ENST00000359087 KIF24Q5T7B8 1368 aa29.42■■■□□ 2.3
NAE1-202ENST00000359087 FCHSD2O94868 740 aa29.41■■■□□ 2.3
NAE1-202ENST00000359087 SLIT3O75094 1523 aa29.41■■■□□ 2.3
NAE1-202ENST00000359087 RGPD1P0DJD0 1748 aa29.41■■■□□ 2.3
NAE1-202ENST00000359087 CDCA7LQ96GN5 454 aa29.41■■■□□ 2.3
NAE1-202ENST00000359087 MAPK8IP3Q9UPT6 1336 aa29.4■■■□□ 2.3
NAE1-202ENST00000359087 AMPHP49418 695 aa29.4■■■□□ 2.3
NAE1-202ENST00000359087 EIF4A2Q14240 407 aaKnown RBP29.4■■■□□ 2.3
NAE1-202ENST00000359087 HSP90AB2PQ58FF8 381 aa29.4■■■□□ 2.3
NAE1-202ENST00000359087 KCNH5Q8NCM2 988 aa29.39■■■□□ 2.3
NAE1-202ENST00000359087 RSPH6AQ9H0K4 717 aa29.38■■■□□ 2.29
NAE1-202ENST00000359087 PXDNQ92626 1479 aa29.38■■■□□ 2.29
NAE1-202ENST00000359087 GOLGA2Q08379 1002 aa29.38■■■□□ 2.29
NAE1-202ENST00000359087 LMOD2Q6P5Q4 547 aa29.38■■■□□ 2.29
NAE1-202ENST00000359087 BRINP3Q76B58 766 aa29.38■■■□□ 2.29
NAE1-202ENST00000359087 SLAIN2Q9P270 581 aa29.38■■■□□ 2.29
NAE1-202ENST00000359087 SUPT16HQ9Y5B9 1047 aaKnown RBP29.38■■■□□ 2.29
NAE1-202ENST00000359087 PHRF1Q9P1Y6 1649 aaKnown RBP29.38■■■□□ 2.29
NAE1-202ENST00000359087 NCBP3Q53F19 620 aaKnown RBP29.37■■■□□ 2.29
NAE1-202ENST00000359087 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
NAE1-202ENST00000359087 NEUROD2Q15784 382 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms