RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 LTKP29376 864 aa20.74■□□□□ 0.91
PTPN5-201ENST00000358540 TMEM2Q9UHN6 1383 aa20.74■□□□□ 0.91
PTPN5-201ENST00000358540 NME9Q86XW9 330 aa20.73■□□□□ 0.91
PTPN5-201ENST00000358540 SLC26A8Q96RN1 970 aa20.73■□□□□ 0.91
PTPN5-201ENST00000358540 DLC1Q96QB1 1528 aa20.73■□□□□ 0.91
PTPN5-201ENST00000358540 NUDT16Q96DE0 195 aaKnown RBP20.73■□□□□ 0.91
PTPN5-201ENST00000358540 HDGFP51858 240 aaKnown RBP20.72■□□□□ 0.91
PTPN5-201ENST00000358540 PPIP5K1Q6PFW1 1433 aa20.72■□□□□ 0.91
PTPN5-201ENST00000358540 PANK1Q8TE04 598 aa20.72■□□□□ 0.91
PTPN5-201ENST00000358540 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
PTPN5-201ENST00000358540 LAS1LQ9Y4W2 734 aaKnown RBP20.72■□□□□ 0.91
PTPN5-201ENST00000358540 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
PTPN5-201ENST00000358540 DIAPH1O60610 1272 aaKnown RBP20.71■□□□□ 0.91
PTPN5-201ENST00000358540 TSR2Q969E8 191 aaKnown RBP20.71■□□□□ 0.91
PTPN5-201ENST00000358540 MAPK8IP3Q9UPT6 1336 aa20.7■□□□□ 0.9
PTPN5-201ENST00000358540 NEFMP07197 916 aa20.7■□□□□ 0.9
PTPN5-201ENST00000358540 TNNQ9UQP3 1299 aa20.7■□□□□ 0.9
PTPN5-201ENST00000358540 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
PTPN5-201ENST00000358540 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
PTPN5-201ENST00000358540 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
PTPN5-201ENST00000358540 WDR63Q8IWG1 891 aa20.69■□□□□ 0.9
PTPN5-201ENST00000358540 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
PTPN5-201ENST00000358540 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
PTPN5-201ENST00000358540 COG6Q9Y2V7 657 aa20.69■□□□□ 0.9
PTPN5-201ENST00000358540 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
PTPN5-201ENST00000358540 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
PTPN5-201ENST00000358540 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
PTPN5-201ENST00000358540 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
PTPN5-201ENST00000358540 KDM2BQ8NHM5 1336 aa20.66■□□□□ 0.9
PTPN5-201ENST00000358540 HMOX1P09601 288 aa20.66■□□□□ 0.9
PTPN5-201ENST00000358540 CCDC27Q2M243 656 aa20.66■□□□□ 0.9
PTPN5-201ENST00000358540 CCDC61Q9Y6R9 512 aa20.66■□□□□ 0.9
PTPN5-201ENST00000358540 MED14O60244 1454 aa20.66■□□□□ 0.9
PTPN5-201ENST00000358540 ATP7BP35670 1465 aa20.66■□□□□ 0.9
PTPN5-201ENST00000358540 PDE4AP27815 886 aa20.65■□□□□ 0.9
PTPN5-201ENST00000358540 UBR1Q8IWV7 1749 aa20.65■□□□□ 0.9
PTPN5-201ENST00000358540 ADAMTS13Q76LX8 1427 aa20.65■□□□□ 0.9
PTPN5-201ENST00000358540 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
PTPN5-201ENST00000358540 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
PTPN5-201ENST00000358540 TRIM35Q9UPQ4 493 aa20.65■□□□□ 0.9
PTPN5-201ENST00000358540 RIPK4P57078 832 aa20.64■□□□□ 0.89
PTPN5-201ENST00000358540 MYH16Q9H6N6 1097 aa20.64■□□□□ 0.89
PTPN5-201ENST00000358540 ANKRD26Q9UPS8 1709 aa20.63■□□□□ 0.89
PTPN5-201ENST00000358540 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
PTPN5-201ENST00000358540 KIF20BQ96Q89 1820 aa20.63■□□□□ 0.89
PTPN5-201ENST00000358540 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
PTPN5-201ENST00000358540 CPSF1Q10570 1443 aaKnown RBP20.62■□□□□ 0.89
PTPN5-201ENST00000358540 RLBP1P12271 317 aa20.62■□□□□ 0.89
PTPN5-201ENST00000358540 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
PTPN5-201ENST00000358540 RGS3P49796 1198 aa20.61■□□□□ 0.89
PTPN5-201ENST00000358540 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
PTPN5-201ENST00000358540 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
PTPN5-201ENST00000358540 CPS1P31327 1500 aa20.61■□□□□ 0.89
PTPN5-201ENST00000358540 ADGRB2O60241 1585 aa20.61■□□□□ 0.89
PTPN5-201ENST00000358540 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
PTPN5-201ENST00000358540 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
PTPN5-201ENST00000358540 TECPR2O15040 1411 aa20.6■□□□□ 0.89
PTPN5-201ENST00000358540 COG3Q96JB2 828 aa20.6■□□□□ 0.89
PTPN5-201ENST00000358540 SOX12O15370 315 aa20.6■□□□□ 0.89
PTPN5-201ENST00000358540 IGHDP01880 384 aa20.58■□□□□ 0.89
PTPN5-201ENST00000358540 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
PTPN5-201ENST00000358540 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
PTPN5-201ENST00000358540 BACH2Q9BYV9 841 aa20.58■□□□□ 0.89
PTPN5-201ENST00000358540 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.88
PTPN5-201ENST00000358540 PLEKHG1Q9ULL1 1385 aa20.58■□□□□ 0.88
PTPN5-201ENST00000358540 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.88
PTPN5-201ENST00000358540 PTPRUQ92729 1446 aa20.57■□□□□ 0.88
PTPN5-201ENST00000358540 RSPH6AQ9H0K4 717 aa20.57■□□□□ 0.88
PTPN5-201ENST00000358540 AMOTL2Q9Y2J4 779 aa20.57■□□□□ 0.88
PTPN5-201ENST00000358540 SIRT1Q96EB6 747 aa20.56■□□□□ 0.88
PTPN5-201ENST00000358540 MS4A1P11836 297 aa20.56■□□□□ 0.88
PTPN5-201ENST00000358540 UBE2Q2Q8WVN8 375 aa20.56■□□□□ 0.88
PTPN5-201ENST00000358540 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 PMFBP1Q8TBY8 1022 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 ACEP12821 1306 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 FCHSD2O94868 740 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
PTPN5-201ENST00000358540 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
PTPN5-201ENST00000358540 KNDC1Q76NI1 1749 aa20.53■□□□□ 0.88
PTPN5-201ENST00000358540 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
PTPN5-201ENST00000358540 IL13P35225 146 aa20.53■□□□□ 0.88
PTPN5-201ENST00000358540 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.53■□□□□ 0.88
PTPN5-201ENST00000358540 C3P01024 1663 aa20.52■□□□□ 0.88
PTPN5-201ENST00000358540 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
PTPN5-201ENST00000358540 PNNQ9H307 717 aaKnown RBP20.51■□□□□ 0.87
PTPN5-201ENST00000358540 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
PTPN5-201ENST00000358540 ZNF692Q9BU19 519 aaPredicted RBP20.5■□□□□ 0.87
PTPN5-201ENST00000358540 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
PTPN5-201ENST00000358540 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
PTPN5-201ENST00000358540 FTSJ3Q8IY81 847 aaKnown RBP20.49■□□□□ 0.87
PTPN5-201ENST00000358540 THEMISQ8N1K5 641 aaPredicted RBP20.49■□□□□ 0.87
PTPN5-201ENST00000358540 ZKSCAN2Q63HK3 967 aa20.48■□□□□ 0.87
PTPN5-201ENST00000358540 FER1L4A9Z1Z3 1794 aa20.47■□□□□ 0.87
PTPN5-201ENST00000358540 NFE2L2Q16236 605 aa20.47■□□□□ 0.87
PTPN5-201ENST00000358540 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
PTPN5-201ENST00000358540 FAM83GA6ND36 823 aa20.46■□□□□ 0.87
PTPN5-201ENST00000358540 ELL2O00472 640 aaPredicted RBP20.46■□□□□ 0.87
PTPN5-201ENST00000358540 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms