RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RILPL2Q969X0 211 aa8.11□□□□□ -1.11
CSDE1-203ENST00000358528 ARHGEF5Q12774 1597 aa8.11□□□□□ -1.11
CSDE1-203ENST00000358528 ST18O60284 1047 aa8.11□□□□□ -1.11
CSDE1-203ENST00000358528 ABCA8O94911 1581 aa8.11□□□□□ -1.11
CSDE1-203ENST00000358528 UGGT1Q9NYU2 1555 aa8.11□□□□□ -1.11
CSDE1-203ENST00000358528 ESF1Q9H501 851 aaKnown RBP8.11□□□□□ -1.11
CSDE1-203ENST00000358528 MAST1Q9Y2H9 1570 aa8.11□□□□□ -1.11
CSDE1-203ENST00000358528 PLCH2O75038 1416 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 HDAC1Q13547 482 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-203ENST00000358528 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 GAS2L2Q8NHY3 880 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 RAPGEF3O95398 923 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 PTMSP20962 102 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 TSPYL6Q8N831 410 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 C14orf93Q9H972 538 aaKnown RBP8.1□□□□□ -1.11
CSDE1-203ENST00000358528 E9PCH4 1651 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 NPC1L1Q9UHC9 1359 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 CLCN1P35523 988 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 NUCB1Q02818 461 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
CSDE1-203ENST00000358528 POTEDQ86YR6 584 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 C16orf71Q8IYS4 520 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-203ENST00000358528 ZBTB40Q9NUA8 1239 aa8.1□□□□□ -1.11
CSDE1-203ENST00000358528 GNAI1P63096 354 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 C14orf37Q86TY3 774 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 SMC5Q8IY18 1101 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 CDK19Q9BWU1 502 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 TRIM35Q9UPQ4 493 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 TTC37Q6PGP7 1564 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 ERVK-7P63135 1459 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 GAS2L3Q86XJ1 694 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 GCC1Q96CN9 775 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 EMILIN1Q9Y6C2 1016 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSDE1-203ENST00000358528 CD2BP2O95400 341 aaKnown RBP8.09□□□□□ -1.11
CSDE1-203ENST00000358528 CT47B1P0C2W7 299 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-203ENST00000358528 ATP10AO60312 1499 aa8.09□□□□□ -1.11
CSDE1-203ENST00000358528 FYB1O15117 783 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 API5Q9BZZ5 524 aaKnown RBP8.08□□□□□ -1.12
CSDE1-203ENST00000358528 RBM27Q9P2N5 1060 aaKnown RBP8.08□□□□□ -1.12
CSDE1-203ENST00000358528 ATAD2Q6PL18 1390 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 WAPLQ7Z5K2 1190 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 PTPRTO14522 1441 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 NEK4P51957 841 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 INTS3Q68E01 1043 aaKnown RBP8.08□□□□□ -1.12
CSDE1-203ENST00000358528 ANO2Q9NQ90 1003 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 BAG4O95429 457 aaKnown RBP8.08□□□□□ -1.12
CSDE1-203ENST00000358528 BMP2KLQ5H9B9 411 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 MIS18AQ9NYP9 233 aa8.08□□□□□ -1.12
CSDE1-203ENST00000358528 CIZ1Q9ULV3 898 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-203ENST00000358528 NUCB2P80303 420 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 TSHZ3Q63HK5 1081 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 SYNMO15061 1565 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 CCDC173Q0VFZ6 552 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
CSDE1-203ENST00000358528 COG3Q96JB2 828 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 CHAMP1Q96JM3 812 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 PKNOX2Q96KN3 472 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 CDC42BPBQ9Y5S2 1711 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-203ENST00000358528 IDI1Q13907 227 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 KRT24Q2M2I5 525 aa8.07□□□□□ -1.12
CSDE1-203ENST00000358528 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.07□□□□□ -1.12
CSDE1-203ENST00000358528 KDM5AP29375 1690 aaKnown RBP8.06□□□□□ -1.12
CSDE1-203ENST00000358528 MCCP23508 829 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 RABEP1Q15276 862 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 ADGRL1O94910 1474 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 SYCE3A1L190 88 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 FCHSD2O94868 740 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 RAB3GAP1Q15042 981 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 NFE2L2Q16236 605 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 ZRANB1Q9UGI0 708 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 FANCAO15360 1455 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 MYO5CQ9NQX4 1742 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 FSD2A1L4K1 749 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 LMOD3Q0VAK6 560 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 OTUD7AQ8TE49 926 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-203ENST00000358528 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
CSDE1-203ENST00000358528 PREX2Q70Z35 1606 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 HMMRO75330 724 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 REC8O95072 547 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 OS9Q13438 667 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-203ENST00000358528 NME9Q86XW9 330 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 C8orf58Q8NAV2 365 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 SULT6B1Q6IMI4 303 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 MCM10Q7L590 875 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 ZGPATQ8N5A5 531 aaKnown RBP8.05□□□□□ -1.12
CSDE1-203ENST00000358528 LTV1Q96GA3 475 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-203ENST00000358528 CHMP3Q9Y3E7 222 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 ALDH1L2Q3SY69 923 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 ZSCAN30Q86W11 494 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 EXOC6BQ9Y2D4 811 aa8.05□□□□□ -1.12
CSDE1-203ENST00000358528 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms