RNA–Protein interactions for RNA: ENST00000358374.3

KNOP1P5-201, Transcript of lysine rich nucleolar protein 1 pseudogene 5, humanhuman

BASIC

Gene KNOP1P5, Length 1,378 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P5-201ENST00000358374 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
KNOP1P5-201ENST00000358374 CDK12Q9NYV4 1490 aaPredicted RBP13.63□□□□□ -0.23
KNOP1P5-201ENST00000358374 LMOD2Q6P5Q4 547 aa13.62□□□□□ -0.23
KNOP1P5-201ENST00000358374 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
KNOP1P5-201ENST00000358374 ARHGEF10O15013 1369 aa13.62□□□□□ -0.23
KNOP1P5-201ENST00000358374 ATRNO75882 1429 aa13.61□□□□□ -0.23
KNOP1P5-201ENST00000358374 SLIT2O94813 1529 aa13.61□□□□□ -0.23
KNOP1P5-201ENST00000358374 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
KNOP1P5-201ENST00000358374 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
KNOP1P5-201ENST00000358374 USP21Q9UK80 565 aa13.61□□□□□ -0.23
KNOP1P5-201ENST00000358374 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
KNOP1P5-201ENST00000358374 RBM6P78332 1123 aaKnown RBP13.6□□□□□ -0.23
KNOP1P5-201ENST00000358374 ACEP12821 1306 aa13.6□□□□□ -0.23
KNOP1P5-201ENST00000358374 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
KNOP1P5-201ENST00000358374 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.23
KNOP1P5-201ENST00000358374 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.23
KNOP1P5-201ENST00000358374 RGS12O14924 1447 aa13.58□□□□□ -0.24
KNOP1P5-201ENST00000358374 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
KNOP1P5-201ENST00000358374 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
KNOP1P5-201ENST00000358374 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
KNOP1P5-201ENST00000358374 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
KNOP1P5-201ENST00000358374 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
KNOP1P5-201ENST00000358374 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
KNOP1P5-201ENST00000358374 UNC5CLQ8IV45 518 aa13.56□□□□□ -0.24
KNOP1P5-201ENST00000358374 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
KNOP1P5-201ENST00000358374 PLCH1Q4KWH8 1693 aa13.55□□□□□ -0.24
KNOP1P5-201ENST00000358374 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
KNOP1P5-201ENST00000358374 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
KNOP1P5-201ENST00000358374 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
KNOP1P5-201ENST00000358374 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
KNOP1P5-201ENST00000358374 EP400Q96L91 3159 aa13.54□□□□□ -0.24
KNOP1P5-201ENST00000358374 CCER1Q8TC90 406 aaPredicted RBP13.54□□□□□ -0.24
KNOP1P5-201ENST00000358374 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
KNOP1P5-201ENST00000358374 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
KNOP1P5-201ENST00000358374 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
KNOP1P5-201ENST00000358374 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.24
KNOP1P5-201ENST00000358374 GLI3P10071 1580 aa13.53□□□□□ -0.24
KNOP1P5-201ENST00000358374 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
KNOP1P5-201ENST00000358374 USP6P35125 1406 aa13.52□□□□□ -0.25
KNOP1P5-201ENST00000358374 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
KNOP1P5-201ENST00000358374 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
KNOP1P5-201ENST00000358374 VPS72Q15906 364 aa13.51□□□□□ -0.25
KNOP1P5-201ENST00000358374 TESK2Q96S53 571 aa13.51□□□□□ -0.25
KNOP1P5-201ENST00000358374 USP19O94966 1318 aa13.51□□□□□ -0.25
KNOP1P5-201ENST00000358374 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
KNOP1P5-201ENST00000358374 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
KNOP1P5-201ENST00000358374 NRAPQ86VF7 1730 aa13.5□□□□□ -0.25
KNOP1P5-201ENST00000358374 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
KNOP1P5-201ENST00000358374 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
KNOP1P5-201ENST00000358374 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
KNOP1P5-201ENST00000358374 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
KNOP1P5-201ENST00000358374 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
KNOP1P5-201ENST00000358374 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
KNOP1P5-201ENST00000358374 MON2Q7Z3U7 1717 aa13.48□□□□□ -0.25
KNOP1P5-201ENST00000358374 BRWD3Q6RI45 1802 aa13.48□□□□□ -0.25
KNOP1P5-201ENST00000358374 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 ZNF692Q9BU19 519 aaPredicted RBP13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 CPDO75976 1380 aa13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 USP47Q96K76 1375 aa13.47□□□□□ -0.25
KNOP1P5-201ENST00000358374 GCP02774 474 aa13.46□□□□□ -0.25
KNOP1P5-201ENST00000358374 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.25
KNOP1P5-201ENST00000358374 CHRNA2Q15822 529 aa13.46□□□□□ -0.25
KNOP1P5-201ENST00000358374 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
KNOP1P5-201ENST00000358374 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.26
KNOP1P5-201ENST00000358374 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
KNOP1P5-201ENST00000358374 TMC1Q8TDI8 760 aa13.45□□□□□ -0.26
KNOP1P5-201ENST00000358374 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
KNOP1P5-201ENST00000358374 NLRP6P59044 892 aa13.45□□□□□ -0.26
KNOP1P5-201ENST00000358374 SLIT3O75094 1523 aa13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 SPATA31A5Q5VU36 1347 aa13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 SPATA31A7Q8IWB4 1347 aa13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 CCDC9Q9Y3X0 531 aaKnown RBP13.44□□□□□ -0.26
KNOP1P5-201ENST00000358374 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
KNOP1P5-201ENST00000358374 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
KNOP1P5-201ENST00000358374 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
KNOP1P5-201ENST00000358374 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
KNOP1P5-201ENST00000358374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.41□□□□□ -0.26
KNOP1P5-201ENST00000358374 COL18A1P39060 1754 aa13.41□□□□□ -0.26
KNOP1P5-201ENST00000358374 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
KNOP1P5-201ENST00000358374 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
KNOP1P5-201ENST00000358374 STRN4Q9NRL3 753 aa13.4□□□□□ -0.26
KNOP1P5-201ENST00000358374 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
KNOP1P5-201ENST00000358374 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
KNOP1P5-201ENST00000358374 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
KNOP1P5-201ENST00000358374 TMF1P82094 1093 aa13.39□□□□□ -0.27
KNOP1P5-201ENST00000358374 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
KNOP1P5-201ENST00000358374 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
KNOP1P5-201ENST00000358374 NME9Q86XW9 330 aa13.39□□□□□ -0.27
KNOP1P5-201ENST00000358374 AATKQ6ZMQ8 1374 aa13.39□□□□□ -0.27
KNOP1P5-201ENST00000358374 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
KNOP1P5-201ENST00000358374 SOX12O15370 315 aa13.38□□□□□ -0.27
KNOP1P5-201ENST00000358374 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
KNOP1P5-201ENST00000358374 LARP1Q6PKG0 1096 aaKnown RBP13.38□□□□□ -0.27
KNOP1P5-201ENST00000358374 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms