RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 AHDC1Q5TGY3 1603 aaPredicted RBP18.94■□□□□ 0.62
NIPAL3-203ENST00000358028 NUTM2FA1L443 756 aa18.93■□□□□ 0.62
NIPAL3-203ENST00000358028 BRINP3Q76B58 766 aa18.93■□□□□ 0.62
NIPAL3-203ENST00000358028 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
NIPAL3-203ENST00000358028 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
NIPAL3-203ENST00000358028 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
NIPAL3-203ENST00000358028 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
NIPAL3-203ENST00000358028 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
NIPAL3-203ENST00000358028 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
NIPAL3-203ENST00000358028 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
NIPAL3-203ENST00000358028 KIF1AQ12756 1690 aa18.9■□□□□ 0.62
NIPAL3-203ENST00000358028 ITSN1Q15811 1721 aa18.9■□□□□ 0.62
NIPAL3-203ENST00000358028 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
NIPAL3-203ENST00000358028 CDCA7LQ96GN5 454 aa18.88■□□□□ 0.61
NIPAL3-203ENST00000358028 JCADQ9P266 1359 aa18.88■□□□□ 0.61
NIPAL3-203ENST00000358028 TOPAZ1Q8N9V7 1692 aa18.88■□□□□ 0.61
NIPAL3-203ENST00000358028 CCDC136Q96JN2 1154 aa18.88■□□□□ 0.61
NIPAL3-203ENST00000358028 RGS17Q9UGC6 210 aaPredicted RBP18.87■□□□□ 0.61
NIPAL3-203ENST00000358028 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
NIPAL3-203ENST00000358028 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
NIPAL3-203ENST00000358028 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
NIPAL3-203ENST00000358028 ATP7BP35670 1465 aa18.86■□□□□ 0.61
NIPAL3-203ENST00000358028 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
NIPAL3-203ENST00000358028 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
NIPAL3-203ENST00000358028 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
NIPAL3-203ENST00000358028 NSD3Q9BZ95 1437 aa18.84■□□□□ 0.61
NIPAL3-203ENST00000358028 PUS7Q96PZ0 661 aaKnown RBP18.82■□□□□ 0.6
NIPAL3-203ENST00000358028 CDK19Q9BWU1 502 aa18.82■□□□□ 0.6
NIPAL3-203ENST00000358028 PXDNQ92626 1479 aa18.81■□□□□ 0.6
NIPAL3-203ENST00000358028 LRP6O75581 1613 aa18.81■□□□□ 0.6
NIPAL3-203ENST00000358028 EVC2Q86UK5 1308 aa18.8■□□□□ 0.6
NIPAL3-203ENST00000358028 MSH5O43196 834 aa18.8■□□□□ 0.6
NIPAL3-203ENST00000358028 ZNF521Q96K83 1311 aa18.79■□□□□ 0.6
NIPAL3-203ENST00000358028 SLC12A5Q9H2X9 1139 aa18.79■□□□□ 0.6
NIPAL3-203ENST00000358028 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
NIPAL3-203ENST00000358028 FOXO3O43524 673 aa18.78■□□□□ 0.6
NIPAL3-203ENST00000358028 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
NIPAL3-203ENST00000358028 POLR3AO14802 1390 aaPredicted RBP18.78■□□□□ 0.6
NIPAL3-203ENST00000358028 NUDT16Q96DE0 195 aaKnown RBP18.78■□□□□ 0.6
NIPAL3-203ENST00000358028 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
NIPAL3-203ENST00000358028 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
NIPAL3-203ENST00000358028 XPCQ01831 940 aaPredicted RBP18.77■□□□□ 0.6
NIPAL3-203ENST00000358028 EXOC6Q8TAG9 804 aa18.77■□□□□ 0.6
NIPAL3-203ENST00000358028 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.6
NIPAL3-203ENST00000358028 TRPM3Q9HCF6 1732 aaPredicted RBP18.77■□□□□ 0.6
NIPAL3-203ENST00000358028 SOS2Q07890 1332 aaPredicted RBP18.77■□□□□ 0.59
NIPAL3-203ENST00000358028 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.59
NIPAL3-203ENST00000358028 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
NIPAL3-203ENST00000358028 POTEAQ6S8J7 498 aa18.75■□□□□ 0.59
NIPAL3-203ENST00000358028 CCDC146Q8IYE0 955 aa18.75■□□□□ 0.59
NIPAL3-203ENST00000358028 ANKRD36BQ8N2N9 1353 aa18.74■□□□□ 0.59
NIPAL3-203ENST00000358028 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
NIPAL3-203ENST00000358028 PPIP5K1Q6PFW1 1433 aa18.73■□□□□ 0.59
NIPAL3-203ENST00000358028 DUSP27Q5VZP5 1158 aa18.73■□□□□ 0.59
NIPAL3-203ENST00000358028 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
NIPAL3-203ENST00000358028 COL22A1Q8NFW1 1626 aaPredicted RBP18.72■□□□□ 0.59
NIPAL3-203ENST00000358028 AKAP12Q02952 1782 aa18.72■□□□□ 0.59
NIPAL3-203ENST00000358028 ERICH6Q7L0X2 663 aa18.72■□□□□ 0.59
NIPAL3-203ENST00000358028 CCDC61Q9Y6R9 512 aa18.72■□□□□ 0.59
NIPAL3-203ENST00000358028 NSD2O96028 1365 aa18.72■□□□□ 0.59
NIPAL3-203ENST00000358028 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
NIPAL3-203ENST00000358028 PNPLA6Q8IY17 1366 aa18.71■□□□□ 0.59
NIPAL3-203ENST00000358028 APAF1O14727 1248 aa18.7■□□□□ 0.58
NIPAL3-203ENST00000358028 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
NIPAL3-203ENST00000358028 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
NIPAL3-203ENST00000358028 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
NIPAL3-203ENST00000358028 NGEFQ8N5V2 710 aa18.7■□□□□ 0.58
NIPAL3-203ENST00000358028 PLIN1O60240 522 aa18.69■□□□□ 0.58
NIPAL3-203ENST00000358028 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
NIPAL3-203ENST00000358028 ABCA3Q99758 1704 aa18.69■□□□□ 0.58
NIPAL3-203ENST00000358028 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
NIPAL3-203ENST00000358028 NGDNQ8NEJ9 315 aaKnown RBP18.68■□□□□ 0.58
NIPAL3-203ENST00000358028 TNS3Q68CZ2 1445 aa18.68■□□□□ 0.58
NIPAL3-203ENST00000358028 ACEP12821 1306 aa18.68■□□□□ 0.58
NIPAL3-203ENST00000358028 PSME1Q06323 249 aa18.68■□□□□ 0.58
NIPAL3-203ENST00000358028 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
NIPAL3-203ENST00000358028 PLEKHG3A1L390 1219 aa18.67■□□□□ 0.58
NIPAL3-203ENST00000358028 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
NIPAL3-203ENST00000358028 MON2Q7Z3U7 1717 aa18.67■□□□□ 0.58
NIPAL3-203ENST00000358028 TNNT2P45379 298 aaPredicted RBP18.66■□□□□ 0.58
NIPAL3-203ENST00000358028 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
NIPAL3-203ENST00000358028 CABP1Q9NZU7 370 aa18.66■□□□□ 0.58
NIPAL3-203ENST00000358028 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
NIPAL3-203ENST00000358028 NRKQ7Z2Y5 1582 aa18.65■□□□□ 0.58
NIPAL3-203ENST00000358028 ANKRD26Q9UPS8 1709 aa18.65■□□□□ 0.58
NIPAL3-203ENST00000358028 MARF1Q9Y4F3 1742 aaKnown RBP18.65■□□□□ 0.58
NIPAL3-203ENST00000358028 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
NIPAL3-203ENST00000358028 SBNO1A3KN83 1393 aa18.65■□□□□ 0.58
NIPAL3-203ENST00000358028 MEX3CQ5U5Q3 659 aaKnown RBP18.65■□□□□ 0.58
NIPAL3-203ENST00000358028 A0A1W2PP64 1363 aa18.64■□□□□ 0.58
NIPAL3-203ENST00000358028 NUTM2BA6NNL0 878 aaPredicted RBP18.63■□□□□ 0.57
NIPAL3-203ENST00000358028 NUTM2EB1AL46 878 aaPredicted RBP18.63■□□□□ 0.57
NIPAL3-203ENST00000358028 MS4A1P11836 297 aa18.63■□□□□ 0.57
NIPAL3-203ENST00000358028 NUTM2AQ8IVF1 878 aaPredicted RBP18.63■□□□□ 0.57
NIPAL3-203ENST00000358028 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
NIPAL3-203ENST00000358028 E9PSI1 815 aa18.63■□□□□ 0.57
NIPAL3-203ENST00000358028 CD163L1Q9NR16 1453 aa18.62■□□□□ 0.57
NIPAL3-203ENST00000358028 MTHFSP49914 203 aa18.62■□□□□ 0.57
NIPAL3-203ENST00000358028 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
NIPAL3-203ENST00000358028 USP6P35125 1406 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms