RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 PRDM11Q9NQV5 511 aa14.82□□□□□ -0.04
LINC01560-201ENST00000357412 ACEP12821 1306 aa14.82□□□□□ -0.04
LINC01560-201ENST00000357412 POLR3AO14802 1390 aaPredicted RBP14.82□□□□□ -0.04
LINC01560-201ENST00000357412 SPATA31A5Q5VU36 1347 aa14.81□□□□□ -0.04
LINC01560-201ENST00000357412 SPATA31A7Q8IWB4 1347 aa14.81□□□□□ -0.04
LINC01560-201ENST00000357412 A0A0G2JS52 829 aa14.8□□□□□ -0.04
LINC01560-201ENST00000357412 MYT1Q01538 1121 aa14.8□□□□□ -0.04
LINC01560-201ENST00000357412 NUTM2GQ5VZR2 741 aa14.8□□□□□ -0.04
LINC01560-201ENST00000357412 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
LINC01560-201ENST00000357412 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
LINC01560-201ENST00000357412 CHRNA2Q15822 529 aa14.79□□□□□ -0.04
LINC01560-201ENST00000357412 L3MBTL2Q969R5 705 aa14.79□□□□□ -0.04
LINC01560-201ENST00000357412 CENPJQ9HC77 1338 aaPredicted RBP14.78□□□□□ -0.04
LINC01560-201ENST00000357412 ZC3H6P61129 1189 aaKnown RBP14.78□□□□□ -0.04
LINC01560-201ENST00000357412 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.05
LINC01560-201ENST00000357412 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
LINC01560-201ENST00000357412 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.77□□□□□ -0.05
LINC01560-201ENST00000357412 SPATA31A1Q5TZJ5 1347 aa14.76□□□□□ -0.05
LINC01560-201ENST00000357412 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
LINC01560-201ENST00000357412 SIN3AQ96ST3 1273 aa14.76□□□□□ -0.05
LINC01560-201ENST00000357412 FAM182BQ5T319 152 aa14.75□□□□□ -0.05
LINC01560-201ENST00000357412 STRN4Q9NRL3 753 aa14.75□□□□□ -0.05
LINC01560-201ENST00000357412 TRPM3Q9HCF6 1732 aaPredicted RBP14.75□□□□□ -0.05
LINC01560-201ENST00000357412 USP19O94966 1318 aa14.74□□□□□ -0.05
LINC01560-201ENST00000357412 CABP1Q9NZU7 370 aa14.74□□□□□ -0.05
LINC01560-201ENST00000357412 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
LINC01560-201ENST00000357412 GCP02774 474 aa14.72□□□□□ -0.05
LINC01560-201ENST00000357412 BAG6P46379 1132 aa14.72□□□□□ -0.05
LINC01560-201ENST00000357412 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
LINC01560-201ENST00000357412 PPIP5K1Q6PFW1 1433 aa14.72□□□□□ -0.05
LINC01560-201ENST00000357412 RGPD8O14715 1765 aaPredicted RBP14.72□□□□□ -0.05
LINC01560-201ENST00000357412 CPDO75976 1380 aa14.72□□□□□ -0.05
LINC01560-201ENST00000357412 ALS2Q96Q42 1657 aa14.71□□□□□ -0.05
LINC01560-201ENST00000357412 EVA1CP58658 441 aa14.71□□□□□ -0.05
LINC01560-201ENST00000357412 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.05
LINC01560-201ENST00000357412 BARGINQ6ZT62 677 aa14.71□□□□□ -0.05
LINC01560-201ENST00000357412 USP35Q9P2H5 1018 aa14.71□□□□□ -0.05
LINC01560-201ENST00000357412 NWD2Q9ULI1 1742 aa14.7□□□□□ -0.06
LINC01560-201ENST00000357412 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
LINC01560-201ENST00000357412 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
LINC01560-201ENST00000357412 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
LINC01560-201ENST00000357412 PLCH1Q4KWH8 1693 aa14.69□□□□□ -0.06
LINC01560-201ENST00000357412 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
LINC01560-201ENST00000357412 ARHGEF28Q8N1W1 1705 aaKnown RBP14.69□□□□□ -0.06
LINC01560-201ENST00000357412 ABCA3Q99758 1704 aa14.69□□□□□ -0.06
LINC01560-201ENST00000357412 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
LINC01560-201ENST00000357412 FAM196AQ6ZSG2 479 aa14.68□□□□□ -0.06
LINC01560-201ENST00000357412 TCP11L2Q8N4U5 519 aa14.68□□□□□ -0.06
LINC01560-201ENST00000357412 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
LINC01560-201ENST00000357412 NLRP6P59044 892 aa14.67□□□□□ -0.06
LINC01560-201ENST00000357412 USP6P35125 1406 aa14.66□□□□□ -0.06
LINC01560-201ENST00000357412 NRAPQ86VF7 1730 aa14.66□□□□□ -0.06
LINC01560-201ENST00000357412 ROCK2O75116 1388 aaKnown RBP14.66□□□□□ -0.06
LINC01560-201ENST00000357412 PSDA5PKW4 1024 aaPredicted RBP14.66□□□□□ -0.06
LINC01560-201ENST00000357412 TRIM37O94972 964 aa14.66□□□□□ -0.06
LINC01560-201ENST00000357412 PDE3BQ13370 1112 aa14.65□□□□□ -0.06
LINC01560-201ENST00000357412 CAMKK2Q96RR4 588 aa14.65□□□□□ -0.06
LINC01560-201ENST00000357412 THRAP3Q9Y2W1 955 aaKnown RBP14.65□□□□□ -0.06
LINC01560-201ENST00000357412 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
LINC01560-201ENST00000357412 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
LINC01560-201ENST00000357412 KIAA1210Q9ULL0 1709 aa14.64□□□□□ -0.07
LINC01560-201ENST00000357412 EZH2Q15910 746 aaKnown RBP14.64□□□□□ -0.07
LINC01560-201ENST00000357412 AATKQ6ZMQ8 1374 aa14.63□□□□□ -0.07
LINC01560-201ENST00000357412 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
LINC01560-201ENST00000357412 TTC21BQ7Z4L5 1316 aa14.63□□□□□ -0.07
LINC01560-201ENST00000357412 THSD7AQ9UPZ6 1657 aa14.62□□□□□ -0.07
LINC01560-201ENST00000357412 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
LINC01560-201ENST00000357412 APBA3O96018 575 aa14.62□□□□□ -0.07
LINC01560-201ENST00000357412 TOPAZ1Q8N9V7 1692 aa14.61□□□□□ -0.07
LINC01560-201ENST00000357412 CRYBG1Q9Y4K1 1723 aa14.61□□□□□ -0.07
LINC01560-201ENST00000357412 NRKQ7Z2Y5 1582 aa14.61□□□□□ -0.07
LINC01560-201ENST00000357412 R3HDM1Q15032 1099 aaKnown RBP14.61□□□□□ -0.07
LINC01560-201ENST00000357412 AXIN2Q9Y2T1 843 aa14.61□□□□□ -0.07
LINC01560-201ENST00000357412 COL5A2P05997 1499 aaPredicted RBP14.61□□□□□ -0.07
LINC01560-201ENST00000357412 ARHGEF25Q86VW2 580 aa14.6□□□□□ -0.07
LINC01560-201ENST00000357412 CRB1P82279 1406 aa14.59□□□□□ -0.07
LINC01560-201ENST00000357412 CARD11Q9BXL7 1154 aa14.59□□□□□ -0.07
LINC01560-201ENST00000357412 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
LINC01560-201ENST00000357412 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.07
LINC01560-201ENST00000357412 TOM1L2Q6ZVM7 507 aa14.58□□□□□ -0.08
LINC01560-201ENST00000357412 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
LINC01560-201ENST00000357412 KCNH5Q8NCM2 988 aa14.58□□□□□ -0.08
LINC01560-201ENST00000357412 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.08
LINC01560-201ENST00000357412 SLIT3O75094 1523 aa14.57□□□□□ -0.08
LINC01560-201ENST00000357412 PHRF1Q9P1Y6 1649 aaKnown RBP14.57□□□□□ -0.08
LINC01560-201ENST00000357412 SOX12O15370 315 aa14.57□□□□□ -0.08
LINC01560-201ENST00000357412 WDR17Q8IZU2 1322 aa14.57□□□□□ -0.08
LINC01560-201ENST00000357412 ITSN1Q15811 1721 aa14.57□□□□□ -0.08
LINC01560-201ENST00000357412 PARD3Q8TEW0 1356 aa14.57□□□□□ -0.08
LINC01560-201ENST00000357412 SBNO2Q9Y2G9 1366 aa14.57□□□□□ -0.08
LINC01560-201ENST00000357412 LMO7Q8WWI1 1683 aa14.55□□□□□ -0.08
LINC01560-201ENST00000357412 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
LINC01560-201ENST00000357412 DDB1Q16531 1140 aa14.55□□□□□ -0.08
LINC01560-201ENST00000357412 KTN1Q86UP2 1357 aaKnown RBP14.55□□□□□ -0.08
LINC01560-201ENST00000357412 CARD10Q9BWT7 1032 aa14.54□□□□□ -0.08
LINC01560-201ENST00000357412 USP31Q70CQ4 1352 aa14.53□□□□□ -0.08
LINC01560-201ENST00000357412 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
LINC01560-201ENST00000357412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC01560-201ENST00000357412 CDCA7Q9BWT1 371 aaPredicted RBP14.53□□□□□ -0.08
LINC01560-201ENST00000357412 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms