RNA–Protein interactions for RNA: ENST00000357327.9

TNIK-203, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-203ENST00000357327 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
TNIK-203ENST00000357327 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
TNIK-203ENST00000357327 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 MCM2P49736 904 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 TSC1Q92574 1164 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
TNIK-203ENST00000357327 KIAA0586Q9BVV6 1533 aa11.66□□□□□ -0.54
TNIK-203ENST00000357327 HTATSF1O43719 755 aaKnown RBP11.66□□□□□ -0.54
TNIK-203ENST00000357327 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
TNIK-203ENST00000357327 SAFB2Q14151 953 aaKnown RBP eCLIP11.65□□□□□ -0.54
TNIK-203ENST00000357327 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
TNIK-203ENST00000357327 USP25Q9UHP3 1055 aa11.65□□□□□ -0.54
TNIK-203ENST00000357327 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.54
TNIK-203ENST00000357327 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
TNIK-203ENST00000357327 VGLL3A8MV65 326 aa11.65□□□□□ -0.54
TNIK-203ENST00000357327 ADCY5O95622 1261 aa11.65□□□□□ -0.55
TNIK-203ENST00000357327 TRIM27P14373 513 aa11.65□□□□□ -0.55
TNIK-203ENST00000357327 ZNF830Q96NB3 372 aaPredicted RBP11.65□□□□□ -0.55
TNIK-203ENST00000357327 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 TMEM57Q8N5G2 664 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 C9orf84Q5VXU9 1444 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.55
TNIK-203ENST00000357327 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
TNIK-203ENST00000357327 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
TNIK-203ENST00000357327 CCDC112Q8NEF3 446 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 TTC12Q9H892 705 aaPredicted RBP11.64□□□□□ -0.55
TNIK-203ENST00000357327 IFT57Q9NWB7 429 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
TNIK-203ENST00000357327 FAM177BA6PVY3 158 aa11.63□□□□□ -0.55
TNIK-203ENST00000357327 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
TNIK-203ENST00000357327 TEX35Q5T0J7 233 aa11.63□□□□□ -0.55
TNIK-203ENST00000357327 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
TNIK-203ENST00000357327 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
TNIK-203ENST00000357327 TMEM63CQ9P1W3 806 aa11.62□□□□□ -0.55
TNIK-203ENST00000357327 ABCC2Q92887 1545 aa11.62□□□□□ -0.55
TNIK-203ENST00000357327 ATP2B3Q16720 1220 aa11.62□□□□□ -0.55
TNIK-203ENST00000357327 GTF2F1P35269 517 aaKnown RBP eCLIP11.62□□□□□ -0.552e-6■■■■□ 19.9
TNIK-203ENST00000357327 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
TNIK-203ENST00000357327 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
TNIK-203ENST00000357327 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
TNIK-203ENST00000357327 TSR2Q969E8 191 aaKnown RBP11.62□□□□□ -0.55
TNIK-203ENST00000357327 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
TNIK-203ENST00000357327 CLASP1Q7Z460 1538 aa11.62□□□□□ -0.55
TNIK-203ENST00000357327 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
TNIK-203ENST00000357327 KRT222Q8N1A0 295 aa11.61□□□□□ -0.55
TNIK-203ENST00000357327 ZNF592Q92610 1267 aa11.61□□□□□ -0.55
TNIK-203ENST00000357327 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
TNIK-203ENST00000357327 NEK4P51957 841 aa11.61□□□□□ -0.55
TNIK-203ENST00000357327 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
TNIK-203ENST00000357327 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
TNIK-203ENST00000357327 GOLGA6L4A6NEF3 574 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 RIOK3O14730 519 aaKnown RBP11.6□□□□□ -0.55
TNIK-203ENST00000357327 CCDC183Q5T5S1 534 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 SPC24Q8NBT2 197 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 ERICH4A6NGS2 130 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 GPT2Q8TD30 523 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
TNIK-203ENST00000357327 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
TNIK-203ENST00000357327 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
TNIK-203ENST00000357327 NUP160Q12769 1436 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 NRDCO43847 1150 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 MTHFSP49914 203 aa11.6□□□□□ -0.55
TNIK-203ENST00000357327 IRX3P78415 501 aaPredicted RBP11.6□□□□□ -0.55
TNIK-203ENST00000357327 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
TNIK-203ENST00000357327 POLR3AO14802 1390 aaPredicted RBP11.59□□□□□ -0.55
TNIK-203ENST00000357327 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
TNIK-203ENST00000357327 TPD52L1Q16890 204 aaPredicted RBP11.59□□□□□ -0.55
TNIK-203ENST00000357327 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
TNIK-203ENST00000357327 ADGRL2O95490 1459 aa11.59□□□□□ -0.55
TNIK-203ENST00000357327 GPS2Q13227 327 aa11.59□□□□□ -0.55
TNIK-203ENST00000357327 PRG4Q92954 1404 aaPredicted RBP11.58□□□□□ -0.56
TNIK-203ENST00000357327 APBB1O00213 710 aa11.58□□□□□ -0.56
TNIK-203ENST00000357327 PAXBP1Q9Y5B6 917 aa11.58□□□□□ -0.56
TNIK-203ENST00000357327 TMEM51Q9NW97 253 aa11.58□□□□□ -0.56
TNIK-203ENST00000357327 VIRMAQ69YN4 1812 aaKnown RBP11.57□□□□□ -0.56
TNIK-203ENST00000357327 GOLGA6L1Q8N7Z2 621 aa11.57□□□□□ -0.56
TNIK-203ENST00000357327 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
TNIK-203ENST00000357327 ERC2O15083 957 aa11.57□□□□□ -0.56
TNIK-203ENST00000357327 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
TNIK-203ENST00000357327 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
TNIK-203ENST00000357327 C17orf53Q8N3J3 647 aaPredicted RBP11.57□□□□□ -0.56
TNIK-203ENST00000357327 ZGPATQ8N5A5 531 aaKnown RBP11.57□□□□□ -0.56
TNIK-203ENST00000357327 CCDC192P0DO97 292 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 TNNT1P13805 278 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
TNIK-203ENST00000357327 GGT6Q6P531 493 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 ZNF428Q96B54 188 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 E9PCH4 1651 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 KDM4AO75164 1064 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 API5Q9BZZ5 524 aaKnown RBP11.56□□□□□ -0.56
TNIK-203ENST00000357327 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 MAGI2Q86UL8 1455 aa11.56□□□□□ -0.56
TNIK-203ENST00000357327 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
TNIK-203ENST00000357327 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms