RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 KIF1BO60333 1816 aa15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 SKOR2Q2VWA4 1001 aaPredicted RBP15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 DZIP1LQ8IYY4 767 aaKnown RBP15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 PPP1R9BQ96SB3 815 aa15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 NSD3Q9BZ95 1437 aa15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 IBTKQ9P2D0 1353 aaPredicted RBP15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
SMARCAL1-201ENST00000357276 PTMSP20962 102 aa15.22■□□□□ 0.03
SMARCAL1-201ENST00000357276 CLEC17AQ6ZS10 378 aa15.22■□□□□ 0.03
SMARCAL1-201ENST00000357276 MROH2AA6NES4 1674 aa15.22■□□□□ 0.03
SMARCAL1-201ENST00000357276 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.03
SMARCAL1-201ENST00000357276 KIF2CQ99661 725 aa15.21■□□□□ 0.03
SMARCAL1-201ENST00000357276 QRICH2Q9H0J4 1663 aa15.21■□□□□ 0.03
SMARCAL1-201ENST00000357276 NEUROD2Q15784 382 aa15.2■□□□□ 0.02
SMARCAL1-201ENST00000357276 CFAP70Q5T0N1 1121 aa15.2■□□□□ 0.02
SMARCAL1-201ENST00000357276 NOS1P29475 1434 aa15.2■□□□□ 0.02
SMARCAL1-201ENST00000357276 GBP4Q96PP9 640 aa15.2■□□□□ 0.02
SMARCAL1-201ENST00000357276 PDCL3Q9H2J4 239 aa15.2■□□□□ 0.02
SMARCAL1-201ENST00000357276 TRIM27P14373 513 aa15.19■□□□□ 0.02
SMARCAL1-201ENST00000357276 DDX19BQ9UMR2 479 aa15.19■□□□□ 0.02
SMARCAL1-201ENST00000357276 AGLP35573 1532 aa15.19■□□□□ 0.02
SMARCAL1-201ENST00000357276 TERF1P54274 439 aa15.19■□□□□ 0.02
SMARCAL1-201ENST00000357276 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
SMARCAL1-201ENST00000357276 TRIM44Q96DX7 344 aaPredicted RBP15.19■□□□□ 0.02
SMARCAL1-201ENST00000357276 CCDC173Q0VFZ6 552 aa15.18■□□□□ 0.02
SMARCAL1-201ENST00000357276 NUCB1Q02818 461 aa15.18■□□□□ 0.02
SMARCAL1-201ENST00000357276 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
SMARCAL1-201ENST00000357276 ZBTB40Q9NUA8 1239 aa15.18■□□□□ 0.02
SMARCAL1-201ENST00000357276 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
SMARCAL1-201ENST00000357276 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
SMARCAL1-201ENST00000357276 CAMSAP1Q5T5Y3 1602 aa15.17■□□□□ 0.02
SMARCAL1-201ENST00000357276 OFD1O75665 1012 aa15.16■□□□□ 0.02
SMARCAL1-201ENST00000357276 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
SMARCAL1-201ENST00000357276 MTHFSP49914 203 aa15.15■□□□□ 0.02
SMARCAL1-201ENST00000357276 ATF7IPQ6VMQ6 1270 aa15.15■□□□□ 0.02
SMARCAL1-201ENST00000357276 ABCC3O15438 1527 aa15.15■□□□□ 0.02
SMARCAL1-201ENST00000357276 MED14O60244 1454 aa15.15■□□□□ 0.02
SMARCAL1-201ENST00000357276 ZSCAN30Q86W11 494 aa15.15■□□□□ 0.02
SMARCAL1-201ENST00000357276 BMP2KLQ5H9B9 411 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 ABCC11Q96J66 1382 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 ADGRB3O60242 1522 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 ARHGEF40Q8TER5 1519 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 NSD2O96028 1365 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 PPLO60437 1756 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 KIF3BO15066 747 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 CD2BP2O95400 341 aaKnown RBP15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 KIAA1211Q6ZU35 1233 aa15.14■□□□□ 0.01
SMARCAL1-201ENST00000357276 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
SMARCAL1-201ENST00000357276 KLHL40Q2TBA0 621 aa15.13■□□□□ 0.01
SMARCAL1-201ENST00000357276 PLEKHF1Q96S99 279 aa15.13■□□□□ 0.01
SMARCAL1-201ENST00000357276 IL16Q14005 1332 aa15.13■□□□□ 0.01
SMARCAL1-201ENST00000357276 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
SMARCAL1-201ENST00000357276 KIF16BQ96L93 1317 aa15.12■□□□□ 0.01
SMARCAL1-201ENST00000357276 CFAP53Q96M91 514 aa15.12■□□□□ 0.01
SMARCAL1-201ENST00000357276 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
SMARCAL1-201ENST00000357276 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 HSP90AB1P08238 724 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 SLC12A5Q9H2X9 1139 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 YEATS2Q9ULM3 1422 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 ZNF445P59923 1031 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 CHD1LQ86WJ1 897 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 TMEM57Q8N5G2 664 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 RIPK4P57078 832 aa15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-201ENST00000357276 NOB1Q9ULX3 412 aaKnown RBP15.1■□□□□ 0.01
SMARCAL1-201ENST00000357276 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
SMARCAL1-201ENST00000357276 CALD1Q05682 793 aaKnown RBP15.09■□□□□ 0.01
SMARCAL1-201ENST00000357276 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
SMARCAL1-201ENST00000357276 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.09■□□□□ 0.01
SMARCAL1-201ENST00000357276 ANKRD26Q9UPS8 1709 aa15.09■□□□□ 0.01
SMARCAL1-201ENST00000357276 BRPF1P55201 1214 aaPredicted RBP15.09■□□□□ 0.01
SMARCAL1-201ENST00000357276 PDLIM2Q96JY6 352 aa15.09■□□□□ 0.01
SMARCAL1-201ENST00000357276 SSFA2P28290 1259 aa15.08■□□□□ 0
SMARCAL1-201ENST00000357276 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
SMARCAL1-201ENST00000357276 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0
SMARCAL1-201ENST00000357276 ZNF500O60304 480 aaPredicted RBP15.07■□□□□ 0
SMARCAL1-201ENST00000357276 BAG4O95429 457 aaKnown RBP15.07■□□□□ 0
SMARCAL1-201ENST00000357276 GAS2L2Q8NHY3 880 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 TULP4Q9NRJ4 1543 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 PPIP5K1Q6PFW1 1433 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 PIK3R4Q99570 1358 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 TMPOP42166 694 aaKnown RBP15.07■□□□□ 0
SMARCAL1-201ENST00000357276 ARHGEF28Q8N1W1 1705 aaKnown RBP15.07■□□□□ 0
SMARCAL1-201ENST00000357276 SIGLEC1Q9BZZ2 1709 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 AK9Q5TCS8 1911 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 CYP2E1P05181 493 aaPredicted RBP15.07■□□□□ 0
SMARCAL1-201ENST00000357276 LNPKQ9C0E8 428 aa15.07■□□□□ 0
SMARCAL1-201ENST00000357276 ALDH1L2Q3SY69 923 aa15.06■□□□□ 0
SMARCAL1-201ENST00000357276 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.06■□□□□ 0
SMARCAL1-201ENST00000357276 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
SMARCAL1-201ENST00000357276 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
SMARCAL1-201ENST00000357276 NOL7Q9UMY1 257 aaKnown RBP15.06■□□□□ 0
SMARCAL1-201ENST00000357276 TBC1D9Q6ZT07 1266 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms