RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 USP21Q9UK80 565 aa12.02□□□□□ -0.49
MAP1LC3C-201ENST00000357246 TOPAZ1Q8N9V7 1692 aa12.02□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ALS2Q96Q42 1657 aa12.02□□□□□ -0.49
MAP1LC3C-201ENST00000357246 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.49
MAP1LC3C-201ENST00000357246 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
MAP1LC3C-201ENST00000357246 RBM6P78332 1123 aaKnown RBP12.01□□□□□ -0.49
MAP1LC3C-201ENST00000357246 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
MAP1LC3C-201ENST00000357246 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
MAP1LC3C-201ENST00000357246 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
MAP1LC3C-201ENST00000357246 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
MAP1LC3C-201ENST00000357246 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
MAP1LC3C-201ENST00000357246 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
MAP1LC3C-201ENST00000357246 CDK12Q9NYV4 1490 aaPredicted RBP11.99□□□□□ -0.49
MAP1LC3C-201ENST00000357246 FAM83GA6ND36 823 aa11.98□□□□□ -0.49
MAP1LC3C-201ENST00000357246 UNC5CLQ8IV45 518 aa11.98□□□□□ -0.49
MAP1LC3C-201ENST00000357246 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
MAP1LC3C-201ENST00000357246 SLIT2O94813 1529 aa11.97□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ATAD2Q6PL18 1390 aa11.97□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ABCA3Q99758 1704 aa11.97□□□□□ -0.49
MAP1LC3C-201ENST00000357246 ATRNO75882 1429 aa11.96□□□□□ -0.49
MAP1LC3C-201ENST00000357246 NLRP13Q86W25 1043 aa11.96□□□□□ -0.49
MAP1LC3C-201ENST00000357246 TESK2Q96S53 571 aa11.96□□□□□ -0.49
MAP1LC3C-201ENST00000357246 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
MAP1LC3C-201ENST00000357246 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
MAP1LC3C-201ENST00000357246 USP6P35125 1406 aa11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 NUTM2GQ5VZR2 741 aa11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
MAP1LC3C-201ENST00000357246 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
MAP1LC3C-201ENST00000357246 VPS72Q15906 364 aa11.93□□□□□ -0.5
MAP1LC3C-201ENST00000357246 USP19O94966 1318 aa11.92□□□□□ -0.5
MAP1LC3C-201ENST00000357246 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
MAP1LC3C-201ENST00000357246 GCP02774 474 aa11.92□□□□□ -0.5
MAP1LC3C-201ENST00000357246 NLRP6P59044 892 aa11.92□□□□□ -0.5
MAP1LC3C-201ENST00000357246 SLC12A5Q9H2X9 1139 aa11.92□□□□□ -0.5
MAP1LC3C-201ENST00000357246 BTG4Q9NY30 223 aa11.92□□□□□ -0.5
MAP1LC3C-201ENST00000357246 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 ZC3H6P61129 1189 aaKnown RBP11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 PRDM11Q9NQV5 511 aa11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 COL14A1Q05707 1796 aaKnown RBP11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 USP47Q96K76 1375 aa11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
MAP1LC3C-201ENST00000357246 RGS12O14924 1447 aa11.9□□□□□ -0.5
MAP1LC3C-201ENST00000357246 TMF1P82094 1093 aa11.9□□□□□ -0.5
MAP1LC3C-201ENST00000357246 TMC1Q8TDI8 760 aa11.9□□□□□ -0.5
MAP1LC3C-201ENST00000357246 CPDO75976 1380 aa11.9□□□□□ -0.5
MAP1LC3C-201ENST00000357246 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
MAP1LC3C-201ENST00000357246 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
MAP1LC3C-201ENST00000357246 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
MAP1LC3C-201ENST00000357246 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
MAP1LC3C-201ENST00000357246 TERF2IPQ9NYB0 399 aa11.89□□□□□ -0.51
MAP1LC3C-201ENST00000357246 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
MAP1LC3C-201ENST00000357246 CD163L1Q9NR16 1453 aa11.89□□□□□ -0.51
MAP1LC3C-201ENST00000357246 CHRNA2Q15822 529 aa11.88□□□□□ -0.51
MAP1LC3C-201ENST00000357246 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
MAP1LC3C-201ENST00000357246 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
MAP1LC3C-201ENST00000357246 GLI3P10071 1580 aa11.88□□□□□ -0.51
MAP1LC3C-201ENST00000357246 MON2Q7Z3U7 1717 aa11.87□□□□□ -0.51
MAP1LC3C-201ENST00000357246 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
MAP1LC3C-201ENST00000357246 KCNH5Q8NCM2 988 aa11.87□□□□□ -0.51
MAP1LC3C-201ENST00000357246 CCDC9Q9Y3X0 531 aaKnown RBP11.87□□□□□ -0.51
MAP1LC3C-201ENST00000357246 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
MAP1LC3C-201ENST00000357246 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
MAP1LC3C-201ENST00000357246 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
MAP1LC3C-201ENST00000357246 SLIT3O75094 1523 aa11.86□□□□□ -0.51
MAP1LC3C-201ENST00000357246 USP31Q70CQ4 1352 aa11.85□□□□□ -0.51
MAP1LC3C-201ENST00000357246 EVA1CP58658 441 aa11.85□□□□□ -0.51
MAP1LC3C-201ENST00000357246 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
MAP1LC3C-201ENST00000357246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.85□□□□□ -0.51
MAP1LC3C-201ENST00000357246 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
MAP1LC3C-201ENST00000357246 NRKQ7Z2Y5 1582 aa11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 EDC4Q6P2E9 1401 aaKnown RBP11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
MAP1LC3C-201ENST00000357246 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.51
MAP1LC3C-201ENST00000357246 NME9Q86XW9 330 aa11.83□□□□□ -0.52
MAP1LC3C-201ENST00000357246 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
MAP1LC3C-201ENST00000357246 LMO7Q8WWI1 1683 aa11.83□□□□□ -0.52
MAP1LC3C-201ENST00000357246 COL18A1P39060 1754 aa11.82□□□□□ -0.52
MAP1LC3C-201ENST00000357246 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
MAP1LC3C-201ENST00000357246 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
MAP1LC3C-201ENST00000357246 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
MAP1LC3C-201ENST00000357246 USP54Q70EL1 1684 aa11.81□□□□□ -0.52
MAP1LC3C-201ENST00000357246 ANKRD36BQ8N2N9 1353 aa11.81□□□□□ -0.52
MAP1LC3C-201ENST00000357246 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
MAP1LC3C-201ENST00000357246 BARGINQ6ZT62 677 aa11.81□□□□□ -0.52
MAP1LC3C-201ENST00000357246 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
MAP1LC3C-201ENST00000357246 AXIN2Q9Y2T1 843 aa11.81□□□□□ -0.52
MAP1LC3C-201ENST00000357246 THRAP3Q9Y2W1 955 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms