RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 KDM2AQ9Y2K7 1162 aa10.73□□□□□ -0.69
GM2A-201ENST00000357164 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
GM2A-201ENST00000357164 ZCCHC11Q5TAX3 1644 aaKnown RBP10.73□□□□□ -0.69
GM2A-201ENST00000357164 LMBRD1Q9NUN5 540 aa10.73□□□□□ -0.69
GM2A-201ENST00000357164 ZKSCAN5Q9Y2L8 839 aa10.73□□□□□ -0.69
GM2A-201ENST00000357164 ABCC1P33527 1531 aa10.73□□□□□ -0.69
GM2A-201ENST00000357164 DLG5Q8TDM6 1919 aa10.73□□□□□ -0.69
GM2A-201ENST00000357164 RBSNQ9H1K0 784 aa10.72□□□□□ -0.69
GM2A-201ENST00000357164 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
GM2A-201ENST00000357164 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
GM2A-201ENST00000357164 NASPP49321 788 aaPredicted RBP10.72□□□□□ -0.69
GM2A-201ENST00000357164 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
GM2A-201ENST00000357164 ARID3AQ99856 593 aa10.72□□□□□ -0.69
GM2A-201ENST00000357164 NUCB1Q02818 461 aa10.71□□□□□ -0.69
GM2A-201ENST00000357164 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
GM2A-201ENST00000357164 ZFYVE16Q7Z3T8 1539 aa10.71□□□□□ -0.69
GM2A-201ENST00000357164 CRYBG1Q9Y4K1 1723 aa10.71□□□□□ -0.69
GM2A-201ENST00000357164 PIK3C2BO00750 1634 aa10.71□□□□□ -0.7
GM2A-201ENST00000357164 ADGRB3O60242 1522 aa10.7□□□□□ -0.7
GM2A-201ENST00000357164 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
GM2A-201ENST00000357164 BAG4O95429 457 aaKnown RBP10.7□□□□□ -0.7
GM2A-201ENST00000357164 KIF20BQ96Q89 1820 aa10.7□□□□□ -0.7
GM2A-201ENST00000357164 PLCH2O75038 1416 aa10.7□□□□□ -0.7
GM2A-201ENST00000357164 WDR43Q15061 677 aaKnown RBP eCLIP10.69□□□□□ -0.7
GM2A-201ENST00000357164 ZSCAN23Q3MJ62 389 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 MYRIPQ8NFW9 859 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 GPT2Q8TD30 523 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 ZBTB40Q9NUA8 1239 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 TMEM51Q9NW97 253 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 UQCRHP07919 91 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
GM2A-201ENST00000357164 PPP6R1Q9UPN7 881 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 FANCAO15360 1455 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 TCHHQ07283 1943 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 SASS6Q6UVJ0 657 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 GAS2L2Q8NHY3 880 aa10.69□□□□□ -0.7
GM2A-201ENST00000357164 RWDD1Q9H446 243 aaPredicted RBP10.68□□□□□ -0.7
GM2A-201ENST00000357164 SENP3Q9H4L4 574 aaPredicted RBP10.68□□□□□ -0.7
GM2A-201ENST00000357164 BMP2KLQ5H9B9 411 aa10.68□□□□□ -0.7
GM2A-201ENST00000357164 SPTLC3Q9NUV7 552 aa10.68□□□□□ -0.7
GM2A-201ENST00000357164 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
GM2A-201ENST00000357164 CT47B1P0C2W7 299 aaPredicted RBP10.67□□□□□ -0.7
GM2A-201ENST00000357164 SSFA2P28290 1259 aa10.67□□□□□ -0.7
GM2A-201ENST00000357164 GTPBP4Q9BZE4 634 aaKnown RBP10.67□□□□□ -0.7
GM2A-201ENST00000357164 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
GM2A-201ENST00000357164 TULP4Q9NRJ4 1543 aa10.67□□□□□ -0.7
GM2A-201ENST00000357164 KIF20AO95235 890 aa10.67□□□□□ -0.7
GM2A-201ENST00000357164 IL17RAQ96F46 866 aa10.67□□□□□ -0.7
GM2A-201ENST00000357164 UPF2Q9HAU5 1272 aaKnown RBP10.67□□□□□ -0.7
GM2A-201ENST00000357164 TRAPPC8Q9Y2L5 1435 aa10.67□□□□□ -0.7
GM2A-201ENST00000357164 KIF16BQ96L93 1317 aa10.67□□□□□ -0.7
GM2A-201ENST00000357164 ANKRD7Q92527 254 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 PLEKHF1Q96S99 279 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 ATP2B3Q16720 1220 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 FRMPD1Q5SYB0 1578 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 ZBTB7CA1YPR0 619 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 GBP4Q96PP9 640 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 ARAP3Q8WWN8 1544 aa10.66□□□□□ -0.7
GM2A-201ENST00000357164 K7ELQ4 463 aaPredicted RBP10.65□□□□□ -0.7
GM2A-201ENST00000357164 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.7
GM2A-201ENST00000357164 FAM53CQ9NYF3 392 aa10.65□□□□□ -0.7
GM2A-201ENST00000357164 KNSTRNQ9Y448 316 aa10.65□□□□□ -0.7
GM2A-201ENST00000357164 LMTK2Q8IWU2 1503 aa10.65□□□□□ -0.7
GM2A-201ENST00000357164 HMGN5P82970 282 aaKnown RBP10.65□□□□□ -0.7
GM2A-201ENST00000357164 TRIM44Q96DX7 344 aaPredicted RBP10.65□□□□□ -0.7
GM2A-201ENST00000357164 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
GM2A-201ENST00000357164 HSCBQ8IWL3 235 aa10.65□□□□□ -0.7
GM2A-201ENST00000357164 R3HCC1Q9Y3T6 440 aaKnown RBP10.65□□□□□ -0.7
GM2A-201ENST00000357164 CARMIL2Q6F5E8 1435 aa10.65□□□□□ -0.71
GM2A-201ENST00000357164 EFCAB6Q5THR3 1501 aa10.64□□□□□ -0.71
GM2A-201ENST00000357164 TRIM27P14373 513 aa10.64□□□□□ -0.71
GM2A-201ENST00000357164 CTIFO43310 598 aaKnown RBP10.64□□□□□ -0.71
GM2A-201ENST00000357164 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
GM2A-201ENST00000357164 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
GM2A-201ENST00000357164 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
GM2A-201ENST00000357164 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
GM2A-201ENST00000357164 RUNDC1Q96C34 613 aa10.63□□□□□ -0.71
GM2A-201ENST00000357164 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
GM2A-201ENST00000357164 NSFL1CQ9UNZ2 370 aaKnown RBP10.63□□□□□ -0.71
GM2A-201ENST00000357164 PPP4R3BQ5MIZ7 849 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 LRSAM1Q6UWE0 723 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 TMEM63CQ9P1W3 806 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 CHD2O14647 1828 aaKnown RBP10.62□□□□□ -0.71
GM2A-201ENST00000357164 PKP1Q13835 747 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 FAM13BQ9NYF5 915 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 UGGT1Q9NYU2 1555 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 CAMSAP1Q5T5Y3 1602 aa10.62□□□□□ -0.71
GM2A-201ENST00000357164 CANXP27824 592 aaKnown RBP10.62□□□□□ -0.71
GM2A-201ENST00000357164 LETM1O95202 739 aaPredicted RBP10.61□□□□□ -0.71
GM2A-201ENST00000357164 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
GM2A-201ENST00000357164 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
GM2A-201ENST00000357164 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
GM2A-201ENST00000357164 LRRC7Q96NW7 1537 aa10.61□□□□□ -0.71
GM2A-201ENST00000357164 SIGLEC1Q9BZZ2 1709 aa10.61□□□□□ -0.71
GM2A-201ENST00000357164 SLC20A2Q08357 652 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 FKBP5Q13451 457 aaPredicted RBP10.6□□□□□ -0.71
GM2A-201ENST00000357164 SIRT2Q8IXJ6 389 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 PRIMPOLQ96LW4 560 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms