RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ANKRD50Q9ULJ7 1429 aa7.81□□□□□ -1.16
VPS13B-202ENST00000357162 KIF20AO95235 890 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 IMMTQ16891 758 aaKnown RBP7.8□□□□□ -1.16
VPS13B-202ENST00000357162 FILIP1LQ4L180 1135 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 ANKRD45Q5TZF3 282 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 CCAR2Q8N163 923 aaKnown RBP7.8□□□□□ -1.16
VPS13B-202ENST00000357162 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 ERCC6Q03468 1493 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 SPRYD3Q8NCJ5 442 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 DDX12PQ92771 950 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 AMOTL1Q8IY63 956 aa7.8□□□□□ -1.16
VPS13B-202ENST00000357162 RBM25P49756 843 aaKnown RBP7.79□□□□□ -1.16
VPS13B-202ENST00000357162 FILIP1Q7Z7B0 1213 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 UBXN4Q92575 508 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 TXLNAP40222 546 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 EXOC6Q8TAG9 804 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 FGD5Q6ZNL6 1462 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 SFPQP23246 707 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS13B-202ENST00000357162 SDF4Q9BRK5 362 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
VPS13B-202ENST00000357162 FEZ1Q99689 392 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 NSD2O96028 1365 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 ZSCAN12O43309 604 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 KRT85P78386 507 aa7.79□□□□□ -1.16
VPS13B-202ENST00000357162 PYM1Q9BRP8 204 aaKnown RBP7.78□□□□□ -1.16
VPS13B-202ENST00000357162 CUL7Q14999 1698 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 COG3Q96JB2 828 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 TMX4Q9H1E5 349 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-202ENST00000357162 K7ELQ4 463 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-202ENST00000357162 CRBNQ96SW2 442 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 FHOD3Q2V2M9 1422 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 PODXL2Q9NZ53 605 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 UQCRHLA0A096LP55 91 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 SMTNL1A8MU46 457 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 NPHP1O15259 732 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 UQCRHP07919 91 aa7.78□□□□□ -1.16
VPS13B-202ENST00000357162 PHAXQ9H814 394 aaKnown RBP7.78□□□□□ -1.16
VPS13B-202ENST00000357162 SLC26A8Q96RN1 970 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 FAM186AA6NE01 2351 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 IFIT2P09913 472 aaKnown RBP7.77□□□□□ -1.17
VPS13B-202ENST00000357162 CCT4P50991 539 aaKnown RBP7.77□□□□□ -1.17
VPS13B-202ENST00000357162 ANKRD12Q6UB98 2062 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 NKTRP30414 1462 aaKnown RBP7.77□□□□□ -1.17
VPS13B-202ENST00000357162 RALYLQ86SE5 291 aaKnown RBP7.77□□□□□ -1.17
VPS13B-202ENST00000357162 PNISRQ8TF01 805 aaKnown RBP7.77□□□□□ -1.17
VPS13B-202ENST00000357162 ATAD2BQ9ULI0 1458 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 KIAA1107Q9UPP5 1409 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 DYDC1Q8WWB3 177 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 ZNF592Q92610 1267 aa7.77□□□□□ -1.17
VPS13B-202ENST00000357162 PPFIBP1Q86W92 1011 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 NCAPD3P42695 1498 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 NBPF1Q3BBV0 1214 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 TIGD1Q96MW7 591 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 G3BP1Q13283 466 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS13B-202ENST00000357162 MCTP1Q6DN14 999 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 TUBB2AQ13885 445 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 WASF1Q92558 559 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 TUBB2BQ9BVA1 445 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 NCOA2Q15596 1464 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 TMCO3Q6UWJ1 677 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 SHTN1A0MZ66 631 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 NF2P35240 595 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 ALDH1L2Q3SY69 923 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 CCDC183Q5T5S1 534 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 KRT222Q8N1A0 295 aa7.76□□□□□ -1.17
VPS13B-202ENST00000357162 HMGXB3Q12766 1538 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 ANO2Q9NQ90 1003 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 CEP290O15078 2479 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 CAMSAP2Q08AD1 1489 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 STK11IPQ8N1F8 1099 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 R3HCC1Q9Y3T6 440 aaKnown RBP7.75□□□□□ -1.17
VPS13B-202ENST00000357162 LRRCC1Q9C099 1032 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 ERICH2A1L162 156 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 NEFHP12036 1026 aa7.75□□□□□ -1.17
VPS13B-202ENST00000357162 AXDND1Q5T1B0 1012 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-202ENST00000357162 OFD1O75665 1012 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 BBXQ8WY36 941 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-202ENST00000357162 CTNNA3Q9UI47 895 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 KIAA1328Q86T90 577 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 CCDC171Q6TFL3 1326 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 RALGAPBQ86X10 1494 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 C9orf78Q9NZ63 289 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-202ENST00000357162 BRPF3Q9ULD4 1205 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 PRXQ9BXM0 1461 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 RPGRIP1LQ68CZ1 1315 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 PLEKHG5O94827 1062 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 TAF7LQ5H9L4 462 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 BMP2KLQ5H9B9 411 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 SMC2O95347 1197 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
VPS13B-202ENST00000357162 EIF2AK4Q9P2K8 1649 aaKnown RBP7.74□□□□□ -1.17
VPS13B-202ENST00000357162 GOLIM4O00461 696 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS13B-202ENST00000357162 TNMDQ9H2S6 317 aa7.74□□□□□ -1.17
VPS13B-202ENST00000357162 KLHL40Q2TBA0 621 aa7.73□□□□□ -1.17
VPS13B-202ENST00000357162 CLASRPQ8N2M8 674 aaKnown RBP7.73□□□□□ -1.17
VPS13B-202ENST00000357162 MYO1BO43795 1136 aa7.73□□□□□ -1.17
VPS13B-202ENST00000357162 FRAT2O75474 233 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-202ENST00000357162 GIMAP7Q8NHV1 300 aa7.73□□□□□ -1.17
VPS13B-202ENST00000357162 GAS2L2Q8NHY3 880 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms