RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
RNF38-204ENST00000357058 USP35Q9P2H5 1018 aa24.77■■□□□ 1.56
RNF38-204ENST00000357058 NSD2O96028 1365 aa24.77■■□□□ 1.56
RNF38-204ENST00000357058 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
RNF38-204ENST00000357058 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
RNF38-204ENST00000357058 RUFY2Q8WXA3 655 aa24.75■■□□□ 1.55
RNF38-204ENST00000357058 THUMPD2Q9BTF0 503 aaKnown RBP24.75■■□□□ 1.55
RNF38-204ENST00000357058 FRAT2O75474 233 aaPredicted RBP24.75■■□□□ 1.55
RNF38-204ENST00000357058 INTS3Q68E01 1043 aaKnown RBP24.75■■□□□ 1.55
RNF38-204ENST00000357058 EIF2AK4Q9P2K8 1649 aaKnown RBP24.75■■□□□ 1.55
RNF38-204ENST00000357058 TMX4Q9H1E5 349 aaPredicted RBP24.74■■□□□ 1.55
RNF38-204ENST00000357058 ISY1Q9ULR0 285 aaKnown RBP24.74■■□□□ 1.55
RNF38-204ENST00000357058 TESK2Q96S53 571 aa24.74■■□□□ 1.55
RNF38-204ENST00000357058 STRN4Q9NRL3 753 aa24.74■■□□□ 1.55
RNF38-204ENST00000357058 FOXD4L5Q5VV16 416 aaPredicted RBP24.73■■□□□ 1.55
RNF38-204ENST00000357058 FOXD4L4Q8WXT5 416 aaPredicted RBP24.73■■□□□ 1.55
RNF38-204ENST00000357058 C22orf23Q9BZE7 217 aa24.72■■□□□ 1.55
RNF38-204ENST00000357058 ANO2Q9NQ90 1003 aa24.72■■□□□ 1.55
RNF38-204ENST00000357058 UHRF1BP1LA0JNW5 1464 aa24.72■■□□□ 1.55
RNF38-204ENST00000357058 HTATSF1O43719 755 aaKnown RBP24.71■■□□□ 1.55
RNF38-204ENST00000357058 AMER1Q5JTC6 1135 aaPredicted RBP24.71■■□□□ 1.55
RNF38-204ENST00000357058 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
RNF38-204ENST00000357058 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
RNF38-204ENST00000357058 CDK11BP21127 795 aaKnown RBP24.7■■□□□ 1.55
RNF38-204ENST00000357058 KCNH5Q8NCM2 988 aa24.7■■□□□ 1.54
RNF38-204ENST00000357058 SYAP1Q96A49 352 aaPredicted RBP24.7■■□□□ 1.54
RNF38-204ENST00000357058 GOLGA6L6A8MZA4 724 aa24.7■■□□□ 1.54
RNF38-204ENST00000357058 GCC1Q96CN9 775 aa24.7■■□□□ 1.54
RNF38-204ENST00000357058 CDC45O75419 566 aa24.7■■□□□ 1.54
RNF38-204ENST00000357058 ZNF428Q96B54 188 aa24.7■■□□□ 1.54
RNF38-204ENST00000357058 PHF8Q9UPP1 1060 aa24.7■■□□□ 1.54
RNF38-204ENST00000357058 TOMM22Q9NS69 142 aa24.69■■□□□ 1.54
RNF38-204ENST00000357058 MAST1Q9Y2H9 1570 aa24.69■■□□□ 1.54
RNF38-204ENST00000357058 ZC3H6P61129 1189 aaKnown RBP24.69■■□□□ 1.54
RNF38-204ENST00000357058 GNAI2P04899 355 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 NKTRP30414 1462 aaKnown RBP24.68■■□□□ 1.54
RNF38-204ENST00000357058 MCM10Q7L590 875 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 ASXL1Q8IXJ9 1541 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 RIMS2Q9UQ26 1411 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 ERC2O15083 957 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 DCTN1Q14203 1278 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 TOM1L2Q6ZVM7 507 aa24.68■■□□□ 1.54
RNF38-204ENST00000357058 SURF6O75683 361 aaKnown RBP24.67■■□□□ 1.54
RNF38-204ENST00000357058 CCT4P50991 539 aaKnown RBP24.67■■□□□ 1.54
RNF38-204ENST00000357058 ABCA8O94911 1581 aa24.67■■□□□ 1.54
RNF38-204ENST00000357058 ANKRD36BQ8N2N9 1353 aa24.67■■□□□ 1.54
RNF38-204ENST00000357058 RARSP54136 660 aaKnown RBP24.67■■□□□ 1.54
RNF38-204ENST00000357058 SPG7Q9UQ90 795 aa24.67■■□□□ 1.54
RNF38-204ENST00000357058 GOLGA6L3A6NEY3 463 aa24.66■■□□□ 1.54
RNF38-204ENST00000357058 DDX11L8A8MPP1 907 aa24.66■■□□□ 1.54
RNF38-204ENST00000357058 C20orf194Q5TEA3 1177 aa24.66■■□□□ 1.54
RNF38-204ENST00000357058 GNAT3A8MTJ3 354 aa24.66■■□□□ 1.54
RNF38-204ENST00000357058 ZKSCAN1P17029 563 aaPredicted RBP24.65■■□□□ 1.54
RNF38-204ENST00000357058 MEX3CQ5U5Q3 659 aaKnown RBP24.65■■□□□ 1.54
RNF38-204ENST00000357058 DUSP27Q5VZP5 1158 aa24.65■■□□□ 1.54
RNF38-204ENST00000357058 PRDM11Q9NQV5 511 aa24.65■■□□□ 1.54
RNF38-204ENST00000357058 PARD3Q8TEW0 1356 aa24.65■■□□□ 1.54
RNF38-204ENST00000357058 LRRFIP1Q32MZ4 808 aaKnown RBP24.65■■□□□ 1.54
RNF38-204ENST00000357058 UHRF1BP1Q6BDS2 1440 aa24.65■■□□□ 1.54
RNF38-204ENST00000357058 GCC2Q8IWJ2 1684 aa24.64■■□□□ 1.54
RNF38-204ENST00000357058 IFT57Q9NWB7 429 aa24.64■■□□□ 1.54
RNF38-204ENST00000357058 MIS18AQ9NYP9 233 aa24.64■■□□□ 1.54
RNF38-204ENST00000357058 ACEP12821 1306 aa24.64■■□□□ 1.53
RNF38-204ENST00000357058 CABP4P57796 275 aa24.63■■□□□ 1.53
RNF38-204ENST00000357058 CSPP1Q1MSJ5 1256 aa24.63■■□□□ 1.53
RNF38-204ENST00000357058 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
RNF38-204ENST00000357058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.63■■□□□ 1.53
RNF38-204ENST00000357058 SSH1Q8WYL5 1049 aa24.63■■□□□ 1.53
RNF38-204ENST00000357058 FOXO3O43524 673 aa24.62■■□□□ 1.53
RNF38-204ENST00000357058 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 G3V3G9 751 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 FYB1O15117 783 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 DCAF8Q5TAQ9 597 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 TULP1O00294 542 aaPredicted RBP24.61■■□□□ 1.53
RNF38-204ENST00000357058 KIF3AQ9Y496 699 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 ADGBQ8N7X0 1667 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 DRC7Q8IY82 874 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 CLASRPQ8N2M8 674 aaKnown RBP24.61■■□□□ 1.53
RNF38-204ENST00000357058 DDX54Q8TDD1 881 aaKnown RBP24.61■■□□□ 1.53
RNF38-204ENST00000357058 SRCIN1Q9C0H9 1055 aa24.61■■□□□ 1.53
RNF38-204ENST00000357058 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
RNF38-204ENST00000357058 NAP1L5Q96NT1 182 aaPredicted RBP24.6■■□□□ 1.53
RNF38-204ENST00000357058 FBLN1P23142 703 aa24.6■■□□□ 1.53
RNF38-204ENST00000357058 MSNP26038 577 aaKnown RBP24.6■■□□□ 1.53
RNF38-204ENST00000357058 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
RNF38-204ENST00000357058 ARHGEF5Q12774 1597 aa24.6■■□□□ 1.53
RNF38-204ENST00000357058 NRDCO43847 1150 aa24.59■■□□□ 1.53
RNF38-204ENST00000357058 USHBP1Q8N6Y0 703 aa24.59■■□□□ 1.53
RNF38-204ENST00000357058 BACH2Q9BYV9 841 aa24.59■■□□□ 1.53
RNF38-204ENST00000357058 CHMP5Q9NZZ3 219 aa24.58■■□□□ 1.53
RNF38-204ENST00000357058 FOXD4L6Q3SYB3 417 aaPredicted RBP24.57■■□□□ 1.52
RNF38-204ENST00000357058 FOXD4L3Q6VB84 417 aaPredicted RBP24.57■■□□□ 1.52
RNF38-204ENST00000357058 ALDH1L2Q3SY69 923 aa24.56■■□□□ 1.52
RNF38-204ENST00000357058 RNF20Q5VTR2 975 aa24.56■■□□□ 1.52
RNF38-204ENST00000357058 MBD5Q9P267 1494 aa24.56■■□□□ 1.52
RNF38-204ENST00000357058 H3BQV1 296 aa24.55■■□□□ 1.52
RNF38-204ENST00000357058 IFFO2Q5TF58 517 aa24.55■■□□□ 1.52
RNF38-204ENST00000357058 FAM184AQ8NB25 1140 aa24.55■■□□□ 1.52
RNF38-204ENST00000357058 PPIP5K1Q6PFW1 1433 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms