RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RSPH6AQ9H0K4 717 aa20.53■□□□□ 0.88
COL27A1-201ENST00000356083 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
COL27A1-201ENST00000356083 DRC1Q96MC2 740 aa20.53■□□□□ 0.88
COL27A1-201ENST00000356083 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
COL27A1-201ENST00000356083 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
COL27A1-201ENST00000356083 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-201ENST00000356083 GSE1Q14687 1217 aa20.52■□□□□ 0.88
COL27A1-201ENST00000356083 CWC15Q9P013 229 aaKnown RBP20.52■□□□□ 0.88
COL27A1-201ENST00000356083 EEA1Q15075 1411 aa20.52■□□□□ 0.88
COL27A1-201ENST00000356083 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
COL27A1-201ENST00000356083 GRM1Q13255 1194 aa20.52■□□□□ 0.88
COL27A1-201ENST00000356083 COMMD10Q9Y6G5 202 aa20.52■□□□□ 0.88
COL27A1-201ENST00000356083 E9PSI1 815 aa20.52■□□□□ 0.87
COL27A1-201ENST00000356083 TRIM21P19474 475 aaKnown RBP20.52■□□□□ 0.87
COL27A1-201ENST00000356083 DIAPH1O60610 1272 aaKnown RBP20.51■□□□□ 0.87
COL27A1-201ENST00000356083 GRIPAP1Q4V328 841 aa20.51■□□□□ 0.87
COL27A1-201ENST00000356083 RSPH4AQ5TD94 716 aa20.51■□□□□ 0.87
COL27A1-201ENST00000356083 SERPINC1P01008 464 aa20.51■□□□□ 0.87
COL27A1-201ENST00000356083 LEKR1Q6ZMV7 388 aa20.51■□□□□ 0.87
COL27A1-201ENST00000356083 NINLQ9Y2I6 1382 aa20.51■□□□□ 0.87
COL27A1-201ENST00000356083 APAF1O14727 1248 aa20.5■□□□□ 0.87
COL27A1-201ENST00000356083 NFKBIBQ15653 356 aa20.5■□□□□ 0.87
COL27A1-201ENST00000356083 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.5■□□□□ 0.87
COL27A1-201ENST00000356083 SIL1Q9H173 461 aa20.5■□□□□ 0.87
COL27A1-201ENST00000356083 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
COL27A1-201ENST00000356083 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
COL27A1-201ENST00000356083 TRMT1LQ7Z2T5 733 aaKnown RBP20.49■□□□□ 0.87
COL27A1-201ENST00000356083 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
COL27A1-201ENST00000356083 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
COL27A1-201ENST00000356083 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
COL27A1-201ENST00000356083 PSMA5P28066 241 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 MYL6BP14649 208 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 MPNDQ8N594 471 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 DYDC1Q8WWB3 177 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 STIM1Q13586 685 aa20.48■□□□□ 0.87
COL27A1-201ENST00000356083 PDE4AP27815 886 aa20.47■□□□□ 0.87
COL27A1-201ENST00000356083 KIAA0754O94854 1291 aa20.47■□□□□ 0.87
COL27A1-201ENST00000356083 GNL3LQ9NVN8 582 aaKnown RBP20.47■□□□□ 0.87
COL27A1-201ENST00000356083 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 CCDC69A6NI79 296 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
COL27A1-201ENST00000356083 SOGA3Q5TF21 947 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 FAM43AQ8N2R8 423 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 CCDC113Q9H0I3 377 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
COL27A1-201ENST00000356083 MPHOSPH8Q99549 860 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
COL27A1-201ENST00000356083 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
COL27A1-201ENST00000356083 ESCO1Q5FWF5 840 aa20.45■□□□□ 0.86
COL27A1-201ENST00000356083 PPFIBP1Q86W92 1011 aa20.45■□□□□ 0.86
COL27A1-201ENST00000356083 LUC7LQ9NQ29 371 aaKnown RBP20.44■□□□□ 0.86
COL27A1-201ENST00000356083 DZIP1LQ8IYY4 767 aaKnown RBP20.44■□□□□ 0.86
COL27A1-201ENST00000356083 CARMIL1Q5VZK9 1371 aa20.44■□□□□ 0.86
COL27A1-201ENST00000356083 SURF6O75683 361 aaKnown RBP20.44■□□□□ 0.86
COL27A1-201ENST00000356083 GOLGA6L7A0A1B0GV03 622 aa20.43■□□□□ 0.86
COL27A1-201ENST00000356083 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-201ENST00000356083 ECM2O94769 699 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-201ENST00000356083 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-201ENST00000356083 CCDC158Q5M9N0 1113 aa20.43■□□□□ 0.86
COL27A1-201ENST00000356083 SERPINA10Q9UK55 444 aa20.43■□□□□ 0.86
COL27A1-201ENST00000356083 VGFO15240 615 aaPredicted RBP20.42■□□□□ 0.86
COL27A1-201ENST00000356083 SOGA1O94964 1423 aa20.42■□□□□ 0.86
COL27A1-201ENST00000356083 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
COL27A1-201ENST00000356083 STK38Q15208 465 aa20.42■□□□□ 0.86
COL27A1-201ENST00000356083 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
COL27A1-201ENST00000356083 NUCB2P80303 420 aa20.42■□□□□ 0.86
COL27A1-201ENST00000356083 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
COL27A1-201ENST00000356083 LIG1P18858 919 aa20.41■□□□□ 0.86
COL27A1-201ENST00000356083 FIBPO43427 364 aa20.41■□□□□ 0.86
COL27A1-201ENST00000356083 NLRP6P59044 892 aa20.41■□□□□ 0.86
COL27A1-201ENST00000356083 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
COL27A1-201ENST00000356083 CEP63Q96MT8 703 aa20.4■□□□□ 0.86
COL27A1-201ENST00000356083 CCDC85AQ96PX6 553 aaPredicted RBP20.4■□□□□ 0.86
COL27A1-201ENST00000356083 WDHD1O75717 1129 aaPredicted RBP20.4■□□□□ 0.86
COL27A1-201ENST00000356083 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
COL27A1-201ENST00000356083 L3MBTL2Q969R5 705 aa20.4■□□□□ 0.86
COL27A1-201ENST00000356083 API5Q9BZZ5 524 aaKnown RBP20.4■□□□□ 0.86
COL27A1-201ENST00000356083 ME1P48163 572 aa20.39■□□□□ 0.86
COL27A1-201ENST00000356083 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
COL27A1-201ENST00000356083 DDX23Q9BUQ8 820 aaKnown RBP20.39■□□□□ 0.85
COL27A1-201ENST00000356083 MACROD2A1Z1Q3 448 aa20.39■□□□□ 0.85
COL27A1-201ENST00000356083 DHX8Q14562 1220 aaKnown RBP20.38■□□□□ 0.85
COL27A1-201ENST00000356083 KIAA1328Q86T90 577 aa20.38■□□□□ 0.85
COL27A1-201ENST00000356083 UBE4AQ14139 1066 aa20.38■□□□□ 0.85
COL27A1-201ENST00000356083 CCDC91Q7Z6B0 441 aa20.38■□□□□ 0.85
COL27A1-201ENST00000356083 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL27A1-201ENST00000356083 HOMER2Q9NSB8 354 aa20.38■□□□□ 0.85
COL27A1-201ENST00000356083 CTNNBL1Q8WYA6 563 aaPredicted RBP20.38■□□□□ 0.85
COL27A1-201ENST00000356083 GOPCQ9HD26 462 aa20.38■□□□□ 0.85
COL27A1-201ENST00000356083 TNNT1P13805 278 aa20.37■□□□□ 0.85
COL27A1-201ENST00000356083 TDO2P48775 406 aa20.37■□□□□ 0.85
COL27A1-201ENST00000356083 BCCIPQ9P287 314 aaKnown RBP eCLIP20.37■□□□□ 0.85
COL27A1-201ENST00000356083 CABP4P57796 275 aa20.37■□□□□ 0.85
COL27A1-201ENST00000356083 TRIM22Q8IYM9 498 aa20.37■□□□□ 0.85
COL27A1-201ENST00000356083 PHLDB1Q86UU1 1377 aa20.37■□□□□ 0.85
COL27A1-201ENST00000356083 UBA5Q9GZZ9 404 aa20.36■□□□□ 0.85
COL27A1-201ENST00000356083 BMP2KQ9NSY1 1161 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms