RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
TRIM4-203ENST00000355947 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
TRIM4-203ENST00000355947 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
TRIM4-203ENST00000355947 UGGT1Q9NYU2 1555 aa16.82■□□□□ 0.28
TRIM4-203ENST00000355947 SYCE3A1L190 88 aa16.81■□□□□ 0.28
TRIM4-203ENST00000355947 DIAPH1O60610 1272 aaKnown RBP16.81■□□□□ 0.28
TRIM4-203ENST00000355947 CCDC173Q0VFZ6 552 aa16.81■□□□□ 0.28
TRIM4-203ENST00000355947 CFAP65Q6ZU64 1925 aaKnown RBP16.81■□□□□ 0.28
TRIM4-203ENST00000355947 EIF2AK4Q9P2K8 1649 aaKnown RBP16.81■□□□□ 0.28
TRIM4-203ENST00000355947 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
TRIM4-203ENST00000355947 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
TRIM4-203ENST00000355947 AAMPQ13685 434 aa16.8■□□□□ 0.28
TRIM4-203ENST00000355947 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
TRIM4-203ENST00000355947 KIF16BQ96L93 1317 aa16.8■□□□□ 0.28
TRIM4-203ENST00000355947 TSHZ3Q63HK5 1081 aa16.8■□□□□ 0.28
TRIM4-203ENST00000355947 SLC4A10Q6U841 1118 aa16.8■□□□□ 0.28
TRIM4-203ENST00000355947 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 ABCC2Q92887 1545 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 NOS1P29475 1434 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
TRIM4-203ENST00000355947 CHD1O14646 1710 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 UQCRHLA0A096LP55 91 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 UQCRHP07919 91 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
TRIM4-203ENST00000355947 FAM177BA6PVY3 158 aa16.78■□□□□ 0.28
TRIM4-203ENST00000355947 CDC45O75419 566 aa16.78■□□□□ 0.28
TRIM4-203ENST00000355947 RBSNQ9H1K0 784 aa16.78■□□□□ 0.28
TRIM4-203ENST00000355947 TPM2P07951 284 aa16.77■□□□□ 0.28
TRIM4-203ENST00000355947 TSC1Q92574 1164 aa16.77■□□□□ 0.28
TRIM4-203ENST00000355947 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
TRIM4-203ENST00000355947 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
TRIM4-203ENST00000355947 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
TRIM4-203ENST00000355947 ZSCAN23Q3MJ62 389 aa16.77■□□□□ 0.28
TRIM4-203ENST00000355947 RBM25P49756 843 aaKnown RBP16.77■□□□□ 0.27
TRIM4-203ENST00000355947 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
TRIM4-203ENST00000355947 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
TRIM4-203ENST00000355947 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.76■□□□□ 0.27
TRIM4-203ENST00000355947 ZNF830Q96NB3 372 aaPredicted RBP16.76■□□□□ 0.27
TRIM4-203ENST00000355947 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
TRIM4-203ENST00000355947 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
TRIM4-203ENST00000355947 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
TRIM4-203ENST00000355947 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
TRIM4-203ENST00000355947 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
TRIM4-203ENST00000355947 SNX21Q969T3 373 aa16.74■□□□□ 0.27
TRIM4-203ENST00000355947 KIF2CQ99661 725 aa16.74■□□□□ 0.27
TRIM4-203ENST00000355947 SYNMO15061 1565 aa16.74■□□□□ 0.27
TRIM4-203ENST00000355947 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
TRIM4-203ENST00000355947 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
TRIM4-203ENST00000355947 A0A0U1RQG5 324 aaPredicted RBP16.74■□□□□ 0.27
TRIM4-203ENST00000355947 LARP6Q9BRS8 491 aaKnown RBP16.74■□□□□ 0.27
TRIM4-203ENST00000355947 NEK4P51957 841 aa16.73■□□□□ 0.27
TRIM4-203ENST00000355947 PTPRTO14522 1441 aa16.73■□□□□ 0.27
TRIM4-203ENST00000355947 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
TRIM4-203ENST00000355947 ATP10AO60312 1499 aa16.73■□□□□ 0.27
TRIM4-203ENST00000355947 TWISTNBQ3B726 338 aaPredicted RBP16.72■□□□□ 0.27
TRIM4-203ENST00000355947 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
TRIM4-203ENST00000355947 ZHX1Q9UKY1 873 aaPredicted RBP16.72■□□□□ 0.27
TRIM4-203ENST00000355947 TRIM6-TRIM34B2RNG4 842 aa16.72■□□□□ 0.27
TRIM4-203ENST00000355947 ST18O60284 1047 aa16.72■□□□□ 0.27
TRIM4-203ENST00000355947 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
TRIM4-203ENST00000355947 PDCL3Q9H2J4 239 aa16.72■□□□□ 0.27
TRIM4-203ENST00000355947 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
TRIM4-203ENST00000355947 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
TRIM4-203ENST00000355947 ARHGEF5Q12774 1597 aa16.71■□□□□ 0.27
TRIM4-203ENST00000355947 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
TRIM4-203ENST00000355947 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
TRIM4-203ENST00000355947 NSFL1CQ9UNZ2 370 aaKnown RBP16.71■□□□□ 0.27
TRIM4-203ENST00000355947 DUOX2Q9NRD8 1548 aa16.71■□□□□ 0.27
TRIM4-203ENST00000355947 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
TRIM4-203ENST00000355947 PRAM1Q96QH2 718 aa16.71■□□□□ 0.26
TRIM4-203ENST00000355947 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
TRIM4-203ENST00000355947 C17orf53Q8N3J3 647 aaPredicted RBP16.7■□□□□ 0.26
TRIM4-203ENST00000355947 ISY1Q9ULR0 285 aaKnown RBP16.7■□□□□ 0.26
TRIM4-203ENST00000355947 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
TRIM4-203ENST00000355947 NUCB2P80303 420 aa16.7■□□□□ 0.26
TRIM4-203ENST00000355947 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
TRIM4-203ENST00000355947 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
TRIM4-203ENST00000355947 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
TRIM4-203ENST00000355947 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
TRIM4-203ENST00000355947 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
TRIM4-203ENST00000355947 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
TRIM4-203ENST00000355947 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
TRIM4-203ENST00000355947 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 OFD1O75665 1012 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 PTMSP20962 102 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
TRIM4-203ENST00000355947 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
TRIM4-203ENST00000355947 FYB1O15117 783 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 RABEP1Q15276 862 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
TRIM4-203ENST00000355947 RRS1Q15050 365 aaKnown RBP16.68■□□□□ 0.26
TRIM4-203ENST00000355947 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
TRIM4-203ENST00000355947 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
TRIM4-203ENST00000355947 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
TRIM4-203ENST00000355947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRIM4-203ENST00000355947 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
TRIM4-203ENST00000355947 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms