RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 MYO5BQ9ULV0 1848 aa10.78□□□□□ -0.68
COMMD9-202ENST00000355500 QRICH2Q9H0J4 1663 aa10.78□□□□□ -0.68
COMMD9-202ENST00000355500 ASXL1Q8IXJ9 1541 aa10.78□□□□□ -0.68
COMMD9-202ENST00000355500 PER1O15534 1290 aaPredicted RBP10.78□□□□□ -0.68
COMMD9-202ENST00000355500 WWC1Q8IX03 1113 aa10.78□□□□□ -0.68
COMMD9-202ENST00000355500 IPO4Q8TEX9 1081 aaKnown RBP10.78□□□□□ -0.68
COMMD9-202ENST00000355500 BLMP54132 1417 aaPredicted RBP10.77□□□□□ -0.69
COMMD9-202ENST00000355500 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.77□□□□□ -0.69
COMMD9-202ENST00000355500 ARHGEF28Q8N1W1 1705 aaKnown RBP10.77□□□□□ -0.69
COMMD9-202ENST00000355500 ROBO1Q9Y6N7 1651 aa10.77□□□□□ -0.69
COMMD9-202ENST00000355500 NBPF1Q3BBV0 1214 aa10.77□□□□□ -0.69
COMMD9-202ENST00000355500 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
COMMD9-202ENST00000355500 NLRP13Q86W25 1043 aa10.76□□□□□ -0.69
COMMD9-202ENST00000355500 TSHZ2Q9NRE2 1034 aa10.76□□□□□ -0.69
COMMD9-202ENST00000355500 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
COMMD9-202ENST00000355500 COL16A1Q07092 1604 aaPredicted RBP10.75□□□□□ -0.69
COMMD9-202ENST00000355500 NHSL1Q5SYE7 1610 aa10.75□□□□□ -0.69
COMMD9-202ENST00000355500 PNISRQ8TF01 805 aaKnown RBP10.75□□□□□ -0.69
COMMD9-202ENST00000355500 RGL3Q3MIN7 710 aa10.74□□□□□ -0.69
COMMD9-202ENST00000355500 FAM43BQ6ZT52 329 aaPredicted RBP10.74□□□□□ -0.69
COMMD9-202ENST00000355500 TBX22Q9Y458 520 aa10.74□□□□□ -0.69
COMMD9-202ENST00000355500 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
COMMD9-202ENST00000355500 SETD1AO15047 1707 aaKnown RBP10.74□□□□□ -0.69
COMMD9-202ENST00000355500 PHLPP1O60346 1717 aa10.73□□□□□ -0.69
COMMD9-202ENST00000355500 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
COMMD9-202ENST00000355500 FAM177A1Q8N128 213 aaPredicted RBP10.73□□□□□ -0.69
COMMD9-202ENST00000355500 PLCD4Q9BRC7 762 aa10.73□□□□□ -0.69
COMMD9-202ENST00000355500 CFAP65Q6ZU64 1925 aaKnown RBP10.73□□□□□ -0.69
COMMD9-202ENST00000355500 RNF123Q5XPI4 1314 aa10.72□□□□□ -0.69
COMMD9-202ENST00000355500 RAD21O60216 631 aa10.72□□□□□ -0.69
COMMD9-202ENST00000355500 CCDC184Q52MB2 194 aa10.72□□□□□ -0.69
COMMD9-202ENST00000355500 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
COMMD9-202ENST00000355500 ILDR2Q71H61 639 aa10.72□□□□□ -0.69
COMMD9-202ENST00000355500 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
COMMD9-202ENST00000355500 PDE3BQ13370 1112 aa10.71□□□□□ -0.69
COMMD9-202ENST00000355500 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.69
COMMD9-202ENST00000355500 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
COMMD9-202ENST00000355500 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.69
COMMD9-202ENST00000355500 DLC1Q96QB1 1528 aa10.71□□□□□ -0.69
COMMD9-202ENST00000355500 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
COMMD9-202ENST00000355500 C14orf93Q9H972 538 aaKnown RBP10.71□□□□□ -0.69
COMMD9-202ENST00000355500 HSPA1LP34931 641 aa10.71□□□□□ -0.7
COMMD9-202ENST00000355500 RBM25P49756 843 aaKnown RBP10.71□□□□□ -0.7
COMMD9-202ENST00000355500 MTMR7Q9Y216 660 aa10.71□□□□□ -0.7
COMMD9-202ENST00000355500 LTKP29376 864 aa10.7□□□□□ -0.7
COMMD9-202ENST00000355500 ADAMTS13Q76LX8 1427 aa10.7□□□□□ -0.7
COMMD9-202ENST00000355500 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
COMMD9-202ENST00000355500 KCTD17Q8N5Z5 321 aa10.69□□□□□ -0.7
COMMD9-202ENST00000355500 TMC1Q8TDI8 760 aa10.69□□□□□ -0.7
COMMD9-202ENST00000355500 ANKRD26Q9UPS8 1709 aa10.69□□□□□ -0.7
COMMD9-202ENST00000355500 IDI1Q13907 227 aa10.68□□□□□ -0.7
COMMD9-202ENST00000355500 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
COMMD9-202ENST00000355500 MSH6P52701 1360 aa10.68□□□□□ -0.7
COMMD9-202ENST00000355500 COL22A1Q8NFW1 1626 aaPredicted RBP10.68□□□□□ -0.7
COMMD9-202ENST00000355500 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
COMMD9-202ENST00000355500 NUDCQ9Y266 331 aa10.68□□□□□ -0.7
COMMD9-202ENST00000355500 SPATA31A6Q5VVP1 1343 aa10.68□□□□□ -0.7
COMMD9-202ENST00000355500 ADGRF5Q8IZF2 1346 aa10.68□□□□□ -0.7
COMMD9-202ENST00000355500 RGS22Q8NE09 1264 aa10.67□□□□□ -0.7
COMMD9-202ENST00000355500 USP35Q9P2H5 1018 aa10.67□□□□□ -0.7
COMMD9-202ENST00000355500 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
COMMD9-202ENST00000355500 NSD2O96028 1365 aa10.67□□□□□ -0.7
COMMD9-202ENST00000355500 FTSJ3Q8IY81 847 aaKnown RBP10.67□□□□□ -0.7
COMMD9-202ENST00000355500 TMEM94Q12767 1356 aa10.66□□□□□ -0.7
COMMD9-202ENST00000355500 JCADQ9P266 1359 aa10.66□□□□□ -0.7
COMMD9-202ENST00000355500 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
COMMD9-202ENST00000355500 NGEFQ8N5V2 710 aa10.66□□□□□ -0.7
COMMD9-202ENST00000355500 FAM9BQ8IZU0 186 aa10.66□□□□□ -0.7
COMMD9-202ENST00000355500 PANK3Q9H999 370 aa10.66□□□□□ -0.7
COMMD9-202ENST00000355500 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
COMMD9-202ENST00000355500 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
COMMD9-202ENST00000355500 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
COMMD9-202ENST00000355500 TULP4Q9NRJ4 1543 aa10.64□□□□□ -0.71
COMMD9-202ENST00000355500 KNSTRNQ9Y448 316 aa10.63□□□□□ -0.71
COMMD9-202ENST00000355500 CCDC27Q2M243 656 aa10.63□□□□□ -0.71
COMMD9-202ENST00000355500 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
COMMD9-202ENST00000355500 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.62□□□□□ -0.71
COMMD9-202ENST00000355500 CDC42BPGQ6DT37 1551 aa10.62□□□□□ -0.71
COMMD9-202ENST00000355500 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
COMMD9-202ENST00000355500 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
COMMD9-202ENST00000355500 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
COMMD9-202ENST00000355500 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
COMMD9-202ENST00000355500 MARF1Q9Y4F3 1742 aaKnown RBP10.61□□□□□ -0.71
COMMD9-202ENST00000355500 NALCNQ8IZF0 1738 aa10.61□□□□□ -0.71
COMMD9-202ENST00000355500 ADGRL3Q9HAR2 1447 aa10.6□□□□□ -0.71
COMMD9-202ENST00000355500 KDM4AO75164 1064 aa10.6□□□□□ -0.71
COMMD9-202ENST00000355500 CNGB1Q14028 1251 aaPredicted RBP10.6□□□□□ -0.71
COMMD9-202ENST00000355500 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
COMMD9-202ENST00000355500 TECPR2O15040 1411 aa10.6□□□□□ -0.71
COMMD9-202ENST00000355500 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
COMMD9-202ENST00000355500 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
COMMD9-202ENST00000355500 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
COMMD9-202ENST00000355500 PPP2R1AP30153 589 aa10.59□□□□□ -0.71
COMMD9-202ENST00000355500 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
COMMD9-202ENST00000355500 PTMSP20962 102 aa10.58□□□□□ -0.72
COMMD9-202ENST00000355500 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
COMMD9-202ENST00000355500 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
COMMD9-202ENST00000355500 ANAPC15P60006 121 aa10.58□□□□□ -0.72
COMMD9-202ENST00000355500 ATAD2Q6PL18 1390 aa10.58□□□□□ -0.72
COMMD9-202ENST00000355500 ADGRB2O60241 1585 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms