RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 CCDC9Q9Y3X0 531 aaKnown RBP6.27□□□□□ -1.41
HMBOX1-202ENST00000355231 CFAP65Q6ZU64 1925 aaKnown RBP6.27□□□□□ -1.41
HMBOX1-202ENST00000355231 DEPDC5O75140 1603 aa6.27□□□□□ -1.41
HMBOX1-202ENST00000355231 STRCP1A6NGW2 1772 aa6.27□□□□□ -1.41
HMBOX1-202ENST00000355231 SPATA31E1Q6ZUB1 1445 aa6.27□□□□□ -1.41
HMBOX1-202ENST00000355231 CCER2I3L3R5 266 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 CLSTN1O94985 981 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 POLR3GLQ9BT43 218 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 NUP155O75694 1391 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 SYNMO15061 1565 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 IQGAP3Q86VI3 1631 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 GOLGA6L3A6NEY3 463 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 TPRNQ4KMQ1 711 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 PLCD3Q8N3E9 789 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 UBR1Q8IWV7 1749 aa6.26□□□□□ -1.41
HMBOX1-202ENST00000355231 TMEM94Q12767 1356 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 TET3O43151 1660 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 ZC3H13Q5T200 1668 aaKnown RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 KIF20AO95235 890 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 HSPA5P11021 654 aaKnown RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 RGS3P49796 1198 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 DDX10Q13206 875 aaKnown RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 NBPF8Q3BBV2 869 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 PROSER2Q86WR7 435 aaPredicted RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 TICAM2Q86XR7 235 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 SECISBP2LQ93073 1101 aaKnown RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 ZNF622Q969S3 477 aaKnown RBP eCLIP6.25□□□□□ -1.411e-7■■□□□ 13.6
HMBOX1-202ENST00000355231 RGS17Q9UGC6 210 aaPredicted RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 PIK3C2BO00750 1634 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 IQGAP1P46940 1657 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 POLR1AO95602 1720 aaPredicted RBP6.25□□□□□ -1.41
HMBOX1-202ENST00000355231 RALGAPBQ86X10 1494 aa6.24□□□□□ -1.41
HMBOX1-202ENST00000355231 CHGAP10645 457 aaKnown RBP6.24□□□□□ -1.41
HMBOX1-202ENST00000355231 MCCP23508 829 aa6.24□□□□□ -1.41
HMBOX1-202ENST00000355231 TERF1P54274 439 aa6.24□□□□□ -1.41
HMBOX1-202ENST00000355231 EIF4G2P78344 907 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■■■□□ 17.9
HMBOX1-202ENST00000355231 EFCAB6Q5THR3 1501 aa6.24□□□□□ -1.41
HMBOX1-202ENST00000355231 NUBP1P53384 320 aa6.23□□□□□ -1.41
HMBOX1-202ENST00000355231 IRX3P78415 501 aaPredicted RBP6.23□□□□□ -1.41
HMBOX1-202ENST00000355231 TBX22Q9Y458 520 aa6.23□□□□□ -1.41
HMBOX1-202ENST00000355231 HIRIP3Q9BW71 556 aaPredicted RBP6.23□□□□□ -1.41
HMBOX1-202ENST00000355231 RIMS2Q9UQ26 1411 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 C19orf67A6NJJ6 358 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 RASEFQ8IZ41 740 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 SLAIN2Q9P270 581 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 CCDC7Q96M83 1385 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 PLEKHG1Q9ULL1 1385 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 ADAMTS13Q76LX8 1427 aa6.22□□□□□ -1.41
HMBOX1-202ENST00000355231 LETM1O95202 739 aaPredicted RBP6.21□□□□□ -1.42
HMBOX1-202ENST00000355231 MMP14P50281 582 aa6.21□□□□□ -1.42
HMBOX1-202ENST00000355231 FAM135BQ49AJ0 1406 aa6.21□□□□□ -1.42
HMBOX1-202ENST00000355231 GTPBP4Q9BZE4 634 aaKnown RBP6.21□□□□□ -1.42
HMBOX1-202ENST00000355231 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.21□□□□□ -1.42
HMBOX1-202ENST00000355231 ADGRB3O60242 1522 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 PTPRUQ92729 1446 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 PHF14O94880 888 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 HDGFP51858 240 aaKnown RBP6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 SETQ01105 290 aaPredicted RBP6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 GRIPAP1Q4V328 841 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 TMEM131LA2VDJ0 1609 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 ANP32CO43423 234 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 SLC20A2Q08357 652 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 FRAT1Q92837 279 aaPredicted RBP6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 AMOTL2Q9Y2J4 779 aa6.2□□□□□ -1.42
HMBOX1-202ENST00000355231 LAMC1P11047 1609 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 CCDC144AA2RUR9 1427 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 METP08581 1390 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 USP47Q96K76 1375 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 DMTNQ08495 405 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 POTEAQ6S8J7 498 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 CEP120Q8N960 986 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 PLCD4Q9BRC7 762 aa6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 MED1Q15648 1581 aaPredicted RBP6.19□□□□□ -1.42
HMBOX1-202ENST00000355231 PRAG1Q86YV5 1406 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 GPRASP1Q5JY77 1395 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 TRPM1Q7Z4N2 1603 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 FAM193AP78312 1265 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 C19orf44Q9H6X5 657 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 TMEM51Q9NW97 253 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 TRPM2O94759 1503 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 XIRP1Q702N8 1843 aaKnown RBP6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 E9PCH4 1651 aa6.18□□□□□ -1.42
HMBOX1-202ENST00000355231 KIF7Q2M1P5 1343 aa6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 APPP05067 770 aa6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 KDM5AP29375 1690 aaKnown RBP6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 PPP4R3BQ5MIZ7 849 aa6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 WWC1Q8IX03 1113 aa6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 YY1AP1Q9H869 796 aa6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 RRAGDQ9NQL2 400 aaPredicted RBP6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 ISY1Q9ULR0 285 aaKnown RBP6.17□□□□□ -1.42
HMBOX1-202ENST00000355231 MSH6P52701 1360 aa6.16□□□□□ -1.42
HMBOX1-202ENST00000355231 TCERG1O14776 1098 aaKnown RBP6.16□□□□□ -1.42
HMBOX1-202ENST00000355231 CD44P16070 742 aaKnown RBP6.16□□□□□ -1.42
HMBOX1-202ENST00000355231 NFKBIBQ15653 356 aa6.16□□□□□ -1.42
HMBOX1-202ENST00000355231 TMEM132AQ24JP5 1023 aa6.16□□□□□ -1.42
HMBOX1-202ENST00000355231 DNTTIP2Q5QJE6 756 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms