RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 BLMP54132 1417 aaPredicted RBP27.44■■□□□ 1.98
TRIM4-202ENST00000354241 INSRP06213 1382 aa27.44■■□□□ 1.98
TRIM4-202ENST00000354241 ZRANB1Q9UGI0 708 aa27.44■■□□□ 1.98
TRIM4-202ENST00000354241 CFAP53Q96M91 514 aa27.43■■□□□ 1.98
TRIM4-202ENST00000354241 SHPRHQ149N8 1683 aa27.42■■□□□ 1.98
TRIM4-202ENST00000354241 COG3Q96JB2 828 aa27.42■■□□□ 1.98
TRIM4-202ENST00000354241 TMEM94Q12767 1356 aa27.41■■□□□ 1.98
TRIM4-202ENST00000354241 SSH2Q76I76 1423 aa27.4■■□□□ 1.98
TRIM4-202ENST00000354241 PHF8Q9UPP1 1060 aa27.39■■□□□ 1.98
TRIM4-202ENST00000354241 MAP2P11137 1827 aaKnown RBP27.39■■□□□ 1.98
TRIM4-202ENST00000354241 C19orf44Q9H6X5 657 aa27.39■■□□□ 1.97
TRIM4-202ENST00000354241 ESCO1Q5FWF5 840 aa27.37■■□□□ 1.97
TRIM4-202ENST00000354241 TTC21AQ8NDW8 1320 aa27.37■■□□□ 1.97
TRIM4-202ENST00000354241 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
TRIM4-202ENST00000354241 NCOA3Q9Y6Q9 1424 aa27.36■■□□□ 1.97
TRIM4-202ENST00000354241 FBLN1P23142 703 aa27.35■■□□□ 1.97
TRIM4-202ENST00000354241 OVOS2A0A0J9YW53 1432 aa27.33■■□□□ 1.97
TRIM4-202ENST00000354241 OVOS2Q6IE36 1432 aa27.33■■□□□ 1.97
TRIM4-202ENST00000354241 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.97
TRIM4-202ENST00000354241 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
TRIM4-202ENST00000354241 PIK3C2AO00443 1686 aa27.32■■□□□ 1.96
TRIM4-202ENST00000354241 ATF3P18847 181 aa27.31■■□□□ 1.96
TRIM4-202ENST00000354241 POLKQ9UBT6 870 aa27.31■■□□□ 1.96
TRIM4-202ENST00000354241 AATKQ6ZMQ8 1374 aa27.31■■□□□ 1.96
TRIM4-202ENST00000354241 ZNF335Q9H4Z2 1342 aaPredicted RBP27.31■■□□□ 1.96
TRIM4-202ENST00000354241 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
TRIM4-202ENST00000354241 PPM1GO15355 546 aaPredicted RBP27.3■■□□□ 1.96
TRIM4-202ENST00000354241 CCDC146Q8IYE0 955 aa27.3■■□□□ 1.96
TRIM4-202ENST00000354241 ORAI2Q96SN7 254 aa27.3■■□□□ 1.96
TRIM4-202ENST00000354241 DCCP43146 1447 aa27.3■■□□□ 1.96
TRIM4-202ENST00000354241 C1orf167Q5SNV9 1468 aa27.29■■□□□ 1.96
TRIM4-202ENST00000354241 GTF3C3Q9Y5Q9 886 aa27.29■■□□□ 1.96
TRIM4-202ENST00000354241 PAK3O75914 559 aaPredicted RBP27.28■■□□□ 1.96
TRIM4-202ENST00000354241 EMILIN1Q9Y6C2 1016 aa27.28■■□□□ 1.96
TRIM4-202ENST00000354241 MSH6P52701 1360 aa27.27■■□□□ 1.96
TRIM4-202ENST00000354241 PSME1Q06323 249 aa27.27■■□□□ 1.96
TRIM4-202ENST00000354241 KIF1AQ12756 1690 aa27.27■■□□□ 1.96
TRIM4-202ENST00000354241 PNPLA6Q8IY17 1366 aa27.26■■□□□ 1.95
TRIM4-202ENST00000354241 NUDCQ9Y266 331 aa27.26■■□□□ 1.95
TRIM4-202ENST00000354241 DMRT2Q9Y5R5 561 aa27.26■■□□□ 1.95
TRIM4-202ENST00000354241 LRRC7Q96NW7 1537 aa27.26■■□□□ 1.95
TRIM4-202ENST00000354241 SMG6Q86US8 1419 aaKnown RBP27.26■■□□□ 1.95
TRIM4-202ENST00000354241 RRS1Q15050 365 aaKnown RBP27.26■■□□□ 1.95
TRIM4-202ENST00000354241 MST1RQ04912 1400 aa27.25■■□□□ 1.95
TRIM4-202ENST00000354241 USP31Q70CQ4 1352 aa27.25■■□□□ 1.95
TRIM4-202ENST00000354241 DIAPH1O60610 1272 aaKnown RBP27.24■■□□□ 1.95
TRIM4-202ENST00000354241 U2AF1L5P0DN76 240 aaPredicted RBP27.24■■□□□ 1.95
TRIM4-202ENST00000354241 U2AF1Q01081 240 aaKnown RBP eCLIP27.24■■□□□ 1.95
TRIM4-202ENST00000354241 CDK12Q9NYV4 1490 aaPredicted RBP27.24■■□□□ 1.95
TRIM4-202ENST00000354241 U2SURPO15042 1029 aaKnown RBP27.23■■□□□ 1.95
TRIM4-202ENST00000354241 NLRP6P59044 892 aa27.23■■□□□ 1.95
TRIM4-202ENST00000354241 CADPS2Q86UW7 1296 aa27.23■■□□□ 1.95
TRIM4-202ENST00000354241 ABTB2Q8N961 1025 aa27.22■■□□□ 1.95
TRIM4-202ENST00000354241 MARF1Q9Y4F3 1742 aaKnown RBP27.22■■□□□ 1.95
TRIM4-202ENST00000354241 SOX12O15370 315 aa27.22■■□□□ 1.95
TRIM4-202ENST00000354241 FOXO3O43524 673 aa27.22■■□□□ 1.95
TRIM4-202ENST00000354241 USP54Q70EL1 1684 aa27.22■■□□□ 1.95
TRIM4-202ENST00000354241 NUTM2GQ5VZR2 741 aa27.21■■□□□ 1.95
TRIM4-202ENST00000354241 APAF1O14727 1248 aa27.2■■□□□ 1.94
TRIM4-202ENST00000354241 XPCQ01831 940 aaPredicted RBP27.18■■□□□ 1.94
TRIM4-202ENST00000354241 RUNDC1Q96C34 613 aa27.18■■□□□ 1.94
TRIM4-202ENST00000354241 PEAK1Q9H792 1746 aa27.16■■□□□ 1.94
TRIM4-202ENST00000354241 TRPM3Q9HCF6 1732 aaPredicted RBP27.15■■□□□ 1.94
TRIM4-202ENST00000354241 PDE3BQ13370 1112 aa27.14■■□□□ 1.94
TRIM4-202ENST00000354241 KRT28Q7Z3Y7 464 aa27.14■■□□□ 1.93
TRIM4-202ENST00000354241 MAP3K19Q56UN5 1328 aa27.11■■□□□ 1.93
TRIM4-202ENST00000354241 IL13P35225 146 aa27.11■■□□□ 1.93
TRIM4-202ENST00000354241 IQSEC2Q5JU85 1478 aa27.11■■□□□ 1.93
TRIM4-202ENST00000354241 TCP11L2Q8N4U5 519 aa27.1■■□□□ 1.93
TRIM4-202ENST00000354241 CDCA7LQ96GN5 454 aa27.09■■□□□ 1.93
TRIM4-202ENST00000354241 LMOD2Q6P5Q4 547 aa27.08■■□□□ 1.93
TRIM4-202ENST00000354241 NGEFQ8N5V2 710 aa27.08■■□□□ 1.93
TRIM4-202ENST00000354241 ZNF521Q96K83 1311 aa27.07■■□□□ 1.92
TRIM4-202ENST00000354241 SBNO1A3KN83 1393 aa27.07■■□□□ 1.92
TRIM4-202ENST00000354241 DDX17Q92841 729 aaKnown RBP27.07■■□□□ 1.92
TRIM4-202ENST00000354241 SUPT16HQ9Y5B9 1047 aaKnown RBP27.07■■□□□ 1.92
TRIM4-202ENST00000354241 AMPHP49418 695 aa27.06■■□□□ 1.92
TRIM4-202ENST00000354241 PLEKHF1Q96S99 279 aa27.06■■□□□ 1.92
TRIM4-202ENST00000354241 PNNQ9H307 717 aaKnown RBP27.06■■□□□ 1.92
TRIM4-202ENST00000354241 RRP7AQ9Y3A4 280 aaKnown RBP27.06■■□□□ 1.92
TRIM4-202ENST00000354241 NEUROD2Q15784 382 aa27.06■■□□□ 1.92
TRIM4-202ENST00000354241 HSP90AB2PQ58FF8 381 aa27.06■■□□□ 1.92
TRIM4-202ENST00000354241 FLT4P35916 1363 aa27.05■■□□□ 1.92
TRIM4-202ENST00000354241 EIF4A2Q14240 407 aaKnown RBP27.05■■□□□ 1.92
TRIM4-202ENST00000354241 NPHP3Q7Z494 1330 aa27.05■■□□□ 1.92
TRIM4-202ENST00000354241 MAPK8IP3Q9UPT6 1336 aa27.05■■□□□ 1.92
TRIM4-202ENST00000354241 LTN1O94822 1766 aa27.05■■□□□ 1.92
TRIM4-202ENST00000354241 FCHSD2O94868 740 aa27.04■■□□□ 1.92
TRIM4-202ENST00000354241 ALS2Q96Q42 1657 aa27.04■■□□□ 1.92
TRIM4-202ENST00000354241 HMOX1P09601 288 aa27.04■■□□□ 1.92
TRIM4-202ENST00000354241 GOLGA2Q08379 1002 aa27.03■■□□□ 1.92
TRIM4-202ENST00000354241 BRINP3Q76B58 766 aa27.02■■□□□ 1.92
TRIM4-202ENST00000354241 RSPH6AQ9H0K4 717 aa27.02■■□□□ 1.92
TRIM4-202ENST00000354241 SLAIN2Q9P270 581 aa27.02■■□□□ 1.92
TRIM4-202ENST00000354241 NFAT5O94916 1531 aa27.02■■□□□ 1.92
TRIM4-202ENST00000354241 PLEKHG5O94827 1062 aa27.02■■□□□ 1.92
TRIM4-202ENST00000354241 PRKAR2BP31323 418 aa27.01■■□□□ 1.91
TRIM4-202ENST00000354241 KCNH5Q8NCM2 988 aa27.01■■□□□ 1.91
TRIM4-202ENST00000354241 NEFLP07196 543 aa27■■□□□ 1.91
TRIM4-202ENST00000354241 SLIT3O75094 1523 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms