RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 RBM33Q96EV2 1170 aaKnown RBP23.25■■□□□ 1.31
APP-203ENST00000354192 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
APP-203ENST00000354192 ZKSCAN2Q63HK3 967 aa23.24■■□□□ 1.31
APP-203ENST00000354192 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
APP-203ENST00000354192 RIMS2Q9UQ26 1411 aa23.24■■□□□ 1.31
APP-203ENST00000354192 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
APP-203ENST00000354192 NUTM2GQ5VZR2 741 aa23.23■■□□□ 1.31
APP-203ENST00000354192 NOB1Q9ULX3 412 aaKnown RBP23.23■■□□□ 1.31
APP-203ENST00000354192 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
APP-203ENST00000354192 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
APP-203ENST00000354192 FAM83GA6ND36 823 aa23.22■■□□□ 1.31
APP-203ENST00000354192 COG3Q96JB2 828 aa23.22■■□□□ 1.31
APP-203ENST00000354192 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
APP-203ENST00000354192 WASLO00401 505 aaPredicted RBP23.22■■□□□ 1.31
APP-203ENST00000354192 METP08581 1390 aa23.21■■□□□ 1.31
APP-203ENST00000354192 ZBTB7CA1YPR0 619 aa23.21■■□□□ 1.31
APP-203ENST00000354192 SPRYD3Q8NCJ5 442 aa23.21■■□□□ 1.31
APP-203ENST00000354192 MYO5BQ9ULV0 1848 aa23.2■■□□□ 1.31
APP-203ENST00000354192 NGEFQ8N5V2 710 aa23.2■■□□□ 1.3
APP-203ENST00000354192 C8orf34Q49A92 452 aa23.2■■□□□ 1.3
APP-203ENST00000354192 ZMYM3Q14202 1370 aa23.2■■□□□ 1.3
APP-203ENST00000354192 ABCC11Q96J66 1382 aa23.2■■□□□ 1.3
APP-203ENST00000354192 SETBP1Q9Y6X0 1596 aa23.19■■□□□ 1.3
APP-203ENST00000354192 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
APP-203ENST00000354192 C1orf115Q9H7X2 142 aa23.19■■□□□ 1.3
APP-203ENST00000354192 SEC24BO95487 1268 aa23.19■■□□□ 1.3
APP-203ENST00000354192 PDZRN3Q9UPQ7 1066 aa23.18■■□□□ 1.3
APP-203ENST00000354192 TRIM27P14373 513 aa23.18■■□□□ 1.3
APP-203ENST00000354192 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
APP-203ENST00000354192 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
APP-203ENST00000354192 CCDC61Q9Y6R9 512 aa23.16■■□□□ 1.3
APP-203ENST00000354192 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.3
APP-203ENST00000354192 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
APP-203ENST00000354192 RICTORQ6R327 1708 aa23.14■■□□□ 1.29
APP-203ENST00000354192 HDGFP51858 240 aaKnown RBP23.13■■□□□ 1.29
APP-203ENST00000354192 MVPQ14764 893 aaKnown RBP23.13■■□□□ 1.29
APP-203ENST00000354192 AEBP1Q8IUX7 1158 aa23.13■■□□□ 1.29
APP-203ENST00000354192 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
APP-203ENST00000354192 TSPYL6Q8N831 410 aa23.13■■□□□ 1.29
APP-203ENST00000354192 DDRGK1Q96HY6 314 aa23.13■■□□□ 1.29
APP-203ENST00000354192 PTPRMP28827 1452 aa23.13■■□□□ 1.29
APP-203ENST00000354192 LTKP29376 864 aa23.13■■□□□ 1.29
APP-203ENST00000354192 NSD2O96028 1365 aa23.12■■□□□ 1.29
APP-203ENST00000354192 PPIP5K1Q6PFW1 1433 aa23.12■■□□□ 1.29
APP-203ENST00000354192 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
APP-203ENST00000354192 LTV1Q96GA3 475 aaPredicted RBP23.12■■□□□ 1.29
APP-203ENST00000354192 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
APP-203ENST00000354192 NGDNQ8NEJ9 315 aaKnown RBP23.11■■□□□ 1.29
APP-203ENST00000354192 PUS7Q96PZ0 661 aaKnown RBP23.11■■□□□ 1.29
APP-203ENST00000354192 APBB1O00213 710 aa23.1■■□□□ 1.29
APP-203ENST00000354192 ATF7IPQ6VMQ6 1270 aa23.1■■□□□ 1.29
APP-203ENST00000354192 ALKQ9UM73 1620 aa23.1■■□□□ 1.29
APP-203ENST00000354192 ARHGEF28Q8N1W1 1705 aaKnown RBP23.1■■□□□ 1.29
APP-203ENST00000354192 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
APP-203ENST00000354192 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
APP-203ENST00000354192 FCHSD2O94868 740 aa23.09■■□□□ 1.29
APP-203ENST00000354192 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
APP-203ENST00000354192 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
APP-203ENST00000354192 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
APP-203ENST00000354192 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
APP-203ENST00000354192 A2ML1A8K2U0 1454 aa23.08■■□□□ 1.29
APP-203ENST00000354192 LNPKQ9C0E8 428 aa23.08■■□□□ 1.29
APP-203ENST00000354192 RSPH6AQ9H0K4 717 aa23.07■■□□□ 1.28
APP-203ENST00000354192 PREX1Q8TCU6 1659 aa23.07■■□□□ 1.28
APP-203ENST00000354192 MFAP1P55081 439 aaKnown RBP23.07■■□□□ 1.28
APP-203ENST00000354192 EID1Q9Y6B2 187 aa23.07■■□□□ 1.28
APP-203ENST00000354192 ZC3H13Q5T200 1668 aaKnown RBP23.06■■□□□ 1.28
APP-203ENST00000354192 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
APP-203ENST00000354192 MCM10Q7L590 875 aa23.06■■□□□ 1.28
APP-203ENST00000354192 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
APP-203ENST00000354192 MYO3AQ8NEV4 1616 aa23.05■■□□□ 1.28
APP-203ENST00000354192 PRR36Q9H6K5 1346 aa23.05■■□□□ 1.28
APP-203ENST00000354192 TNRQ92752 1358 aa23.05■■□□□ 1.28
APP-203ENST00000354192 CLTCQ00610 1675 aaKnown RBP23.05■■□□□ 1.28
APP-203ENST00000354192 UPF2Q9HAU5 1272 aaKnown RBP23.05■■□□□ 1.28
APP-203ENST00000354192 ACEP12821 1306 aa23.05■■□□□ 1.28
APP-203ENST00000354192 NFE2L2Q16236 605 aa23.04■■□□□ 1.28
APP-203ENST00000354192 NECTIN2Q92692 538 aa23.03■■□□□ 1.28
APP-203ENST00000354192 ARXQ96QS3 562 aa23.03■■□□□ 1.28
APP-203ENST00000354192 ZFYVE9O95405 1425 aa23.03■■□□□ 1.28
APP-203ENST00000354192 AMOTL2Q9Y2J4 779 aa23.03■■□□□ 1.28
APP-203ENST00000354192 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
APP-203ENST00000354192 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
APP-203ENST00000354192 IPO8O15397 1037 aaKnown RBP23.02■■□□□ 1.28
APP-203ENST00000354192 DDX19BQ9UMR2 479 aa23.02■■□□□ 1.28
APP-203ENST00000354192 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
APP-203ENST00000354192 LMOD2Q6P5Q4 547 aa23.01■■□□□ 1.27
APP-203ENST00000354192 DIP2BQ9P265 1576 aa23.01■■□□□ 1.27
APP-203ENST00000354192 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
APP-203ENST00000354192 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
APP-203ENST00000354192 IL13P35225 146 aa22.99■■□□□ 1.27
APP-203ENST00000354192 ROBO2Q9HCK4 1378 aa22.99■■□□□ 1.27
APP-203ENST00000354192 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
APP-203ENST00000354192 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
APP-203ENST00000354192 ARHGEF40Q8TER5 1519 aa22.99■■□□□ 1.27
APP-203ENST00000354192 AMPHP49418 695 aa22.99■■□□□ 1.27
APP-203ENST00000354192 ANKRD45Q5TZF3 282 aa22.99■■□□□ 1.27
APP-203ENST00000354192 FOXO3O43524 673 aa22.98■■□□□ 1.27
APP-203ENST00000354192 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
APP-203ENST00000354192 EIF4A2Q14240 407 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms