RNA–Protein interactions for RNA: ENST00000350887.5

SNRNP35-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRNP35, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-201ENST00000350887 DCCP43146 1447 aa15.55■□□□□ 0.08
SNRNP35-201ENST00000350887 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
SNRNP35-201ENST00000350887 CFAP53Q96M91 514 aa15.55■□□□□ 0.08
SNRNP35-201ENST00000350887 USP54Q70EL1 1684 aa15.54■□□□□ 0.08
SNRNP35-201ENST00000350887 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
SNRNP35-201ENST00000350887 TMEM94Q12767 1356 aa15.53■□□□□ 0.08
SNRNP35-201ENST00000350887 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
SNRNP35-201ENST00000350887 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
SNRNP35-201ENST00000350887 BLMP54132 1417 aaPredicted RBP15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 PIK3C2AO00443 1686 aa15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 NME9Q86XW9 330 aa15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 COG3Q96JB2 828 aa15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
SNRNP35-201ENST00000350887 ZBED9Q6R2W3 1325 aa15.51■□□□□ 0.07
SNRNP35-201ENST00000350887 C19orf44Q9H6X5 657 aa15.51■□□□□ 0.07
SNRNP35-201ENST00000350887 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
SNRNP35-201ENST00000350887 MSH6P52701 1360 aa15.5■□□□□ 0.07
SNRNP35-201ENST00000350887 MTHFSP49914 203 aa15.5■□□□□ 0.07
SNRNP35-201ENST00000350887 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
SNRNP35-201ENST00000350887 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
SNRNP35-201ENST00000350887 ATF3P18847 181 aa15.49■□□□□ 0.07
SNRNP35-201ENST00000350887 MARF1Q9Y4F3 1742 aaKnown RBP15.48■□□□□ 0.07
SNRNP35-201ENST00000350887 LRRC7Q96NW7 1537 aa15.48■□□□□ 0.07
SNRNP35-201ENST00000350887 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
SNRNP35-201ENST00000350887 ESCO1Q5FWF5 840 aa15.48■□□□□ 0.07
SNRNP35-201ENST00000350887 AATKQ6ZMQ8 1374 aa15.48■□□□□ 0.07
SNRNP35-201ENST00000350887 MST1RQ04912 1400 aa15.47■□□□□ 0.07
SNRNP35-201ENST00000350887 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 SMG6Q86US8 1419 aaKnown RBP15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 CADPS2Q86UW7 1296 aa15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 ADAMTS8Q9UP79 889 aa15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
SNRNP35-201ENST00000350887 ZNF335Q9H4Z2 1342 aaPredicted RBP15.45■□□□□ 0.06
SNRNP35-201ENST00000350887 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
SNRNP35-201ENST00000350887 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
SNRNP35-201ENST00000350887 PSME1Q06323 249 aa15.43■□□□□ 0.06
SNRNP35-201ENST00000350887 LTN1O94822 1766 aa15.42■□□□□ 0.06
SNRNP35-201ENST00000350887 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
SNRNP35-201ENST00000350887 ORAI2Q96SN7 254 aa15.42■□□□□ 0.06
SNRNP35-201ENST00000350887 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
SNRNP35-201ENST00000350887 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
SNRNP35-201ENST00000350887 PNPLA6Q8IY17 1366 aa15.4■□□□□ 0.06
SNRNP35-201ENST00000350887 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
SNRNP35-201ENST00000350887 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
SNRNP35-201ENST00000350887 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
SNRNP35-201ENST00000350887 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
SNRNP35-201ENST00000350887 NLRP6P59044 892 aa15.39■□□□□ 0.05
SNRNP35-201ENST00000350887 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
SNRNP35-201ENST00000350887 U2AF1L5P0DN76 240 aaPredicted RBP15.38■□□□□ 0.05
SNRNP35-201ENST00000350887 U2AF1Q01081 240 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNRNP35-201ENST00000350887 CCDC146Q8IYE0 955 aa15.38■□□□□ 0.05
SNRNP35-201ENST00000350887 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
SNRNP35-201ENST00000350887 FOXO3O43524 673 aa15.37■□□□□ 0.05
SNRNP35-201ENST00000350887 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
SNRNP35-201ENST00000350887 IQSEC2Q5JU85 1478 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 FBLN1P23142 703 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 KRT28Q7Z3Y7 464 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 PNNQ9H307 717 aaKnown RBP15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 SALL2Q9Y467 1007 aaPredicted RBP15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
SNRNP35-201ENST00000350887 SLIT3O75094 1523 aa15.35■□□□□ 0.05
SNRNP35-201ENST00000350887 SOX12O15370 315 aa15.35■□□□□ 0.05
SNRNP35-201ENST00000350887 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
SNRNP35-201ENST00000350887 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
SNRNP35-201ENST00000350887 NFAT5O94916 1531 aa15.34■□□□□ 0.05
SNRNP35-201ENST00000350887 NUTM2GQ5VZR2 741 aa15.34■□□□□ 0.05
SNRNP35-201ENST00000350887 NHSL1Q5SYE7 1610 aa15.34■□□□□ 0.05
SNRNP35-201ENST00000350887 FLT4P35916 1363 aa15.34■□□□□ 0.05
SNRNP35-201ENST00000350887 KIF24Q5T7B8 1368 aa15.34■□□□□ 0.05
SNRNP35-201ENST00000350887 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
SNRNP35-201ENST00000350887 APAF1O14727 1248 aa15.33■□□□□ 0.04
SNRNP35-201ENST00000350887 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.04
SNRNP35-201ENST00000350887 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.04
SNRNP35-201ENST00000350887 MAPK8IP3Q9UPT6 1336 aa15.33■□□□□ 0.04
SNRNP35-201ENST00000350887 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 NEFMP07197 916 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 AMPHP49418 695 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 TNS3Q68CZ2 1445 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 PXDNQ92626 1479 aa15.32■□□□□ 0.04
SNRNP35-201ENST00000350887 LMOD2Q6P5Q4 547 aa15.31■□□□□ 0.04
SNRNP35-201ENST00000350887 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
SNRNP35-201ENST00000350887 IL13P35225 146 aa15.3■□□□□ 0.04
SNRNP35-201ENST00000350887 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
SNRNP35-201ENST00000350887 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
SNRNP35-201ENST00000350887 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
SNRNP35-201ENST00000350887 MED1Q15648 1581 aaPredicted RBP15.29■□□□□ 0.04
SNRNP35-201ENST00000350887 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
SNRNP35-201ENST00000350887 USP19O94966 1318 aa15.28■□□□□ 0.04
SNRNP35-201ENST00000350887 FCHSD2O94868 740 aa15.28■□□□□ 0.04
SNRNP35-201ENST00000350887 EIF4A2Q14240 407 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms