RNA–Protein interactions for RNA: ENST00000349299.7

H2AFV-203, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-203ENST00000349299 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
H2AFV-203ENST00000349299 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
H2AFV-203ENST00000349299 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
H2AFV-203ENST00000349299 MYOM1P52179 1685 aa13.63□□□□□ -0.23
H2AFV-203ENST00000349299 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
H2AFV-203ENST00000349299 BRINP3Q76B58 766 aa13.62□□□□□ -0.23
H2AFV-203ENST00000349299 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
H2AFV-203ENST00000349299 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
H2AFV-203ENST00000349299 FKBP8Q14318 412 aa13.61□□□□□ -0.23
H2AFV-203ENST00000349299 ORAI2Q96SN7 254 aa13.61□□□□□ -0.23
H2AFV-203ENST00000349299 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
H2AFV-203ENST00000349299 DISP3Q9P2K9 1392 aa13.6□□□□□ -0.23
H2AFV-203ENST00000349299 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
H2AFV-203ENST00000349299 MON2Q7Z3U7 1717 aa13.6□□□□□ -0.23
H2AFV-203ENST00000349299 NUDT16Q96DE0 195 aaKnown RBP13.6□□□□□ -0.23
H2AFV-203ENST00000349299 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
H2AFV-203ENST00000349299 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
H2AFV-203ENST00000349299 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
H2AFV-203ENST00000349299 TMF1P82094 1093 aa13.58□□□□□ -0.24
H2AFV-203ENST00000349299 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
H2AFV-203ENST00000349299 SHPRHQ149N8 1683 aa13.57□□□□□ -0.24
H2AFV-203ENST00000349299 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
H2AFV-203ENST00000349299 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
H2AFV-203ENST00000349299 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
H2AFV-203ENST00000349299 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
H2AFV-203ENST00000349299 PXDNQ92626 1479 aa13.56□□□□□ -0.24
H2AFV-203ENST00000349299 NRKQ7Z2Y5 1582 aa13.56□□□□□ -0.24
H2AFV-203ENST00000349299 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
H2AFV-203ENST00000349299 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
H2AFV-203ENST00000349299 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
H2AFV-203ENST00000349299 FOXO3O43524 673 aa13.54□□□□□ -0.24
H2AFV-203ENST00000349299 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
H2AFV-203ENST00000349299 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
H2AFV-203ENST00000349299 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
H2AFV-203ENST00000349299 HSPA1LP34931 641 aa13.53□□□□□ -0.24
H2AFV-203ENST00000349299 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
H2AFV-203ENST00000349299 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
H2AFV-203ENST00000349299 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
H2AFV-203ENST00000349299 ILDR1Q86SU0 546 aaPredicted RBP13.52□□□□□ -0.25
H2AFV-203ENST00000349299 NGDNQ8NEJ9 315 aaKnown RBP13.52□□□□□ -0.25
H2AFV-203ENST00000349299 CABP1Q9NZU7 370 aa13.52□□□□□ -0.25
H2AFV-203ENST00000349299 ACEP12821 1306 aa13.52□□□□□ -0.25
H2AFV-203ENST00000349299 SOS2Q07890 1332 aaPredicted RBP13.52□□□□□ -0.25
H2AFV-203ENST00000349299 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
H2AFV-203ENST00000349299 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
H2AFV-203ENST00000349299 CD163L1Q9NR16 1453 aa13.51□□□□□ -0.25
H2AFV-203ENST00000349299 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
H2AFV-203ENST00000349299 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
H2AFV-203ENST00000349299 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
H2AFV-203ENST00000349299 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
H2AFV-203ENST00000349299 PSME1Q06323 249 aa13.5□□□□□ -0.25
H2AFV-203ENST00000349299 KRT28Q7Z3Y7 464 aa13.5□□□□□ -0.25
H2AFV-203ENST00000349299 TMC1Q8TDI8 760 aa13.5□□□□□ -0.25
H2AFV-203ENST00000349299 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
H2AFV-203ENST00000349299 USP6P35125 1406 aa13.49□□□□□ -0.25
H2AFV-203ENST00000349299 SLC12A5Q9H2X9 1139 aa13.49□□□□□ -0.25
H2AFV-203ENST00000349299 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
H2AFV-203ENST00000349299 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
H2AFV-203ENST00000349299 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
H2AFV-203ENST00000349299 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
H2AFV-203ENST00000349299 PHRF1Q9P1Y6 1649 aaKnown RBP13.48□□□□□ -0.25
H2AFV-203ENST00000349299 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
H2AFV-203ENST00000349299 BRD4O60885 1362 aaPredicted RBP13.47□□□□□ -0.25
H2AFV-203ENST00000349299 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
H2AFV-203ENST00000349299 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
H2AFV-203ENST00000349299 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
H2AFV-203ENST00000349299 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
H2AFV-203ENST00000349299 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
H2AFV-203ENST00000349299 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
H2AFV-203ENST00000349299 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
H2AFV-203ENST00000349299 JCADQ9P266 1359 aa13.46□□□□□ -0.25
H2AFV-203ENST00000349299 MED1Q15648 1581 aaPredicted RBP13.46□□□□□ -0.25
H2AFV-203ENST00000349299 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
H2AFV-203ENST00000349299 HDGFL2Q7Z4V5 671 aaPredicted RBP13.46□□□□□ -0.25
H2AFV-203ENST00000349299 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
H2AFV-203ENST00000349299 SSH2Q76I76 1423 aa13.46□□□□□ -0.26
H2AFV-203ENST00000349299 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
H2AFV-203ENST00000349299 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
H2AFV-203ENST00000349299 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
H2AFV-203ENST00000349299 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
H2AFV-203ENST00000349299 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
H2AFV-203ENST00000349299 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
H2AFV-203ENST00000349299 TTC21BQ7Z4L5 1316 aa13.41□□□□□ -0.26
H2AFV-203ENST00000349299 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
H2AFV-203ENST00000349299 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
H2AFV-203ENST00000349299 LTN1O94822 1766 aa13.4□□□□□ -0.26
H2AFV-203ENST00000349299 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
H2AFV-203ENST00000349299 NSD3Q9BZ95 1437 aa13.39□□□□□ -0.27
H2AFV-203ENST00000349299 SLIT3O75094 1523 aa13.39□□□□□ -0.27
H2AFV-203ENST00000349299 LRP6O75581 1613 aa13.39□□□□□ -0.27
H2AFV-203ENST00000349299 PLCH1Q4KWH8 1693 aa13.38□□□□□ -0.27
H2AFV-203ENST00000349299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
H2AFV-203ENST00000349299 ABTB2Q8N961 1025 aa13.38□□□□□ -0.27
H2AFV-203ENST00000349299 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
H2AFV-203ENST00000349299 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
H2AFV-203ENST00000349299 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
H2AFV-203ENST00000349299 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
H2AFV-203ENST00000349299 PANK3Q9H999 370 aa13.37□□□□□ -0.27
H2AFV-203ENST00000349299 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
H2AFV-203ENST00000349299 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms