RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 HECW1Q76N89 1606 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 GRIN2BQ13224 1484 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
SMG7-201ENST00000347615 TPD52L1Q16890 204 aaPredicted RBP12.66□□□□□ -0.38
SMG7-201ENST00000347615 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
SMG7-201ENST00000347615 SEC24BO95487 1268 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 ESPNB1AK53 854 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 NEXNQ0ZGT2 675 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 WAPLQ7Z5K2 1190 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 NOC3LQ8WTT2 800 aaKnown RBP12.66□□□□□ -0.38
SMG7-201ENST00000347615 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 CCDC39Q9UFE4 941 aa12.66□□□□□ -0.38
SMG7-201ENST00000347615 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 F6X3S4 739 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 TTLL5Q6EMB2 1281 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 CPLX1O14810 134 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
SMG7-201ENST00000347615 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 RABEP1Q15276 862 aa12.65□□□□□ -0.38
SMG7-201ENST00000347615 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.39
SMG7-201ENST00000347615 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 UQCRHLA0A096LP55 91 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 UQCRHP07919 91 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 TRIM27P14373 513 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
SMG7-201ENST00000347615 FYB1O15117 783 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
SMG7-201ENST00000347615 CAMK4Q16566 473 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
SMG7-201ENST00000347615 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
SMG7-201ENST00000347615 FAM69CQ0P6D2 419 aa12.63□□□□□ -0.39
SMG7-201ENST00000347615 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
SMG7-201ENST00000347615 ERC2O15083 957 aa12.63□□□□□ -0.39
SMG7-201ENST00000347615 RAD21O60216 631 aa12.63□□□□□ -0.39
SMG7-201ENST00000347615 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
SMG7-201ENST00000347615 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 GNAI2P04899 355 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 CNTROBQ8N137 903 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
SMG7-201ENST00000347615 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 PDILTQ8N807 584 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 SKIDA1Q1XH10 827 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 C8orf34Q49A92 452 aa12.62□□□□□ -0.39
SMG7-201ENST00000347615 GTF2E1P29083 439 aaPredicted RBP12.61□□□□□ -0.39
SMG7-201ENST00000347615 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 MYL6BP14649 208 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
SMG7-201ENST00000347615 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
SMG7-201ENST00000347615 RPRD2Q5VT52 1461 aaKnown RBP12.61□□□□□ -0.39
SMG7-201ENST00000347615 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
SMG7-201ENST00000347615 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
SMG7-201ENST00000347615 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
SMG7-201ENST00000347615 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
SMG7-201ENST00000347615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■□□□□ 9.1
SMG7-201ENST00000347615 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
SMG7-201ENST00000347615 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
SMG7-201ENST00000347615 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
SMG7-201ENST00000347615 TPM3P06753 285 aa12.6□□□□□ -0.39
SMG7-201ENST00000347615 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
SMG7-201ENST00000347615 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
SMG7-201ENST00000347615 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
SMG7-201ENST00000347615 GOLGA6L1Q8N7Z2 621 aa12.59□□□□□ -0.39
SMG7-201ENST00000347615 SMC2O95347 1197 aa12.59□□□□□ -0.39
SMG7-201ENST00000347615 AAMPQ13685 434 aa12.59□□□□□ -0.39
SMG7-201ENST00000347615 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
SMG7-201ENST00000347615 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
SMG7-201ENST00000347615 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
SMG7-201ENST00000347615 CCDC73Q6ZRK6 1079 aa12.59□□□□□ -0.39
SMG7-201ENST00000347615 NME9Q86XW9 330 aa12.58□□□□□ -0.39
SMG7-201ENST00000347615 PCMTD1Q96MG8 357 aaPredicted RBP12.58□□□□□ -0.39
SMG7-201ENST00000347615 RLBP1P12271 317 aa12.58□□□□□ -0.4
SMG7-201ENST00000347615 CCDC85AQ96PX6 553 aaPredicted RBP12.58□□□□□ -0.4
SMG7-201ENST00000347615 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
SMG7-201ENST00000347615 THOC2Q8NI27 1593 aaKnown RBP12.58□□□□□ -0.4
SMG7-201ENST00000347615 EVA1CP58658 441 aa12.57□□□□□ -0.4
SMG7-201ENST00000347615 AKAP17AQ02040 695 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms