RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 CD163L1Q9NR16 1453 aa30.92■■■□□ 2.54
PTPA-202ENST00000347048 BCL2L13Q9BXK5 485 aa30.92■■■□□ 2.54
PTPA-202ENST00000347048 PNNQ9H307 717 aaKnown RBP30.92■■■□□ 2.54
PTPA-202ENST00000347048 SAFB2Q14151 953 aaKnown RBP eCLIP30.91■■■□□ 2.54
PTPA-202ENST00000347048 STK26Q9P289 416 aa30.91■■■□□ 2.54
PTPA-202ENST00000347048 TMPOP42166 694 aaKnown RBP30.9■■■□□ 2.54
PTPA-202ENST00000347048 BECN1Q14457 450 aa30.9■■■□□ 2.54
PTPA-202ENST00000347048 GSE1Q14687 1217 aa30.9■■■□□ 2.54
PTPA-202ENST00000347048 DZIP1LQ8IYY4 767 aaKnown RBP30.9■■■□□ 2.54
PTPA-202ENST00000347048 TNNQ9UQP3 1299 aa30.9■■■□□ 2.54
PTPA-202ENST00000347048 PDZRN3Q9UPQ7 1066 aa30.89■■■□□ 2.54
PTPA-202ENST00000347048 GGNBP2Q9H3C7 697 aa30.88■■■□□ 2.53
PTPA-202ENST00000347048 FYB1O15117 783 aa30.88■■■□□ 2.53
PTPA-202ENST00000347048 FTSJ3Q8IY81 847 aaKnown RBP30.88■■■□□ 2.53
PTPA-202ENST00000347048 U2SURPO15042 1029 aaKnown RBP30.87■■■□□ 2.53
PTPA-202ENST00000347048 PRAM1Q96QH2 718 aa30.87■■■□□ 2.53
PTPA-202ENST00000347048 UPF2Q9HAU5 1272 aaKnown RBP30.87■■■□□ 2.53
PTPA-202ENST00000347048 POGKQ9P215 609 aa30.87■■■□□ 2.53
PTPA-202ENST00000347048 ALKQ9UM73 1620 aa30.87■■■□□ 2.53
PTPA-202ENST00000347048 KIF20BQ96Q89 1820 aa30.87■■■□□ 2.53
PTPA-202ENST00000347048 PNPLA6Q8IY17 1366 aa30.86■■■□□ 2.53
PTPA-202ENST00000347048 HDGFL2Q7Z4V5 671 aaPredicted RBP30.86■■■□□ 2.53
PTPA-202ENST00000347048 CDC42BPGQ6DT37 1551 aa30.86■■■□□ 2.53
PTPA-202ENST00000347048 TRIM35Q9UPQ4 493 aa30.86■■■□□ 2.53
PTPA-202ENST00000347048 ARHGEF40Q8TER5 1519 aa30.84■■■□□ 2.53
PTPA-202ENST00000347048 SMC4Q9NTJ3 1288 aa30.84■■■□□ 2.53
PTPA-202ENST00000347048 MINK1Q8N4C8 1332 aaPredicted RBP30.84■■■□□ 2.53
PTPA-202ENST00000347048 SEC24BO95487 1268 aa30.83■■■□□ 2.53
PTPA-202ENST00000347048 EXOSC9Q06265 439 aaKnown RBP30.83■■■□□ 2.53
PTPA-202ENST00000347048 DIAPH1O60610 1272 aaKnown RBP30.82■■■□□ 2.52
PTPA-202ENST00000347048 DLC1Q96QB1 1528 aa30.82■■■□□ 2.52
PTPA-202ENST00000347048 TSR2Q969E8 191 aaKnown RBP30.81■■■□□ 2.52
PTPA-202ENST00000347048 DDX19BQ9UMR2 479 aa30.81■■■□□ 2.52
PTPA-202ENST00000347048 HDAC1Q13547 482 aaPredicted RBP30.8■■■□□ 2.52
PTPA-202ENST00000347048 ATF7IPQ6VMQ6 1270 aa30.78■■■□□ 2.52
PTPA-202ENST00000347048 TBC1D32Q96NH3 1257 aa30.78■■■□□ 2.52
PTPA-202ENST00000347048 REREQ9P2R6 1566 aa30.77■■■□□ 2.52
PTPA-202ENST00000347048 ATP7BP35670 1465 aa30.77■■■□□ 2.52
PTPA-202ENST00000347048 TRIM27P14373 513 aa30.77■■■□□ 2.52
PTPA-202ENST00000347048 SSH1Q8WYL5 1049 aa30.77■■■□□ 2.52
PTPA-202ENST00000347048 CDK19Q9BWU1 502 aa30.77■■■□□ 2.52
PTPA-202ENST00000347048 PPP6R1Q9UPN7 881 aa30.76■■■□□ 2.51
PTPA-202ENST00000347048 KIF16BQ96L93 1317 aa30.76■■■□□ 2.51
PTPA-202ENST00000347048 RIPK4P57078 832 aa30.75■■■□□ 2.51
PTPA-202ENST00000347048 FCHSD2O94868 740 aa30.74■■■□□ 2.51
PTPA-202ENST00000347048 FRAT2O75474 233 aaPredicted RBP30.74■■■□□ 2.51
PTPA-202ENST00000347048 IPO8O15397 1037 aaKnown RBP30.73■■■□□ 2.51
PTPA-202ENST00000347048 ALDH1L2Q3SY69 923 aa30.73■■■□□ 2.51
PTPA-202ENST00000347048 AGLP35573 1532 aa30.72■■■□□ 2.51
PTPA-202ENST00000347048 ZNF428Q96B54 188 aa30.72■■■□□ 2.51
PTPA-202ENST00000347048 LRRC7Q96NW7 1537 aa30.71■■■□□ 2.51
PTPA-202ENST00000347048 ITPRIPQ8IWB1 547 aa30.7■■■□□ 2.5
PTPA-202ENST00000347048 CABP1Q9NZU7 370 aa30.7■■■□□ 2.5
PTPA-202ENST00000347048 FAM135BQ49AJ0 1406 aa30.69■■■□□ 2.5
PTPA-202ENST00000347048 PPIP5K1Q6PFW1 1433 aa30.69■■■□□ 2.5
PTPA-202ENST00000347048 NOB1Q9ULX3 412 aaKnown RBP30.68■■■□□ 2.5
PTPA-202ENST00000347048 FBXO31Q5XUX0 539 aaPredicted RBP30.68■■■□□ 2.5
PTPA-202ENST00000347048 STAG3Q9UJ98 1225 aa30.68■■■□□ 2.5
PTPA-202ENST00000347048 SMC5Q8IY18 1101 aa30.67■■■□□ 2.5
PTPA-202ENST00000347048 BRPF1P55201 1214 aaPredicted RBP30.66■■■□□ 2.5
PTPA-202ENST00000347048 SETD1AO15047 1707 aaKnown RBP30.66■■■□□ 2.5
PTPA-202ENST00000347048 SPATA31D1Q6ZQQ2 1576 aa30.66■■■□□ 2.5
PTPA-202ENST00000347048 A2ML1A8K2U0 1454 aa30.65■■■□□ 2.5
PTPA-202ENST00000347048 ZBTB40Q9NUA8 1239 aa30.65■■■□□ 2.5
PTPA-202ENST00000347048 RSPH6AQ9H0K4 717 aa30.64■■■□□ 2.5
PTPA-202ENST00000347048 CALD1Q05682 793 aaKnown RBP30.63■■■□□ 2.49
PTPA-202ENST00000347048 TMEM57Q8N5G2 664 aa30.63■■■□□ 2.49
PTPA-202ENST00000347048 ANTXR1Q9H6X2 564 aa30.61■■■□□ 2.49
PTPA-202ENST00000347048 SENP3Q9H4L4 574 aaPredicted RBP30.61■■■□□ 2.49
PTPA-202ENST00000347048 POLKQ9UBT6 870 aa30.61■■■□□ 2.49
PTPA-202ENST00000347048 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
PTPA-202ENST00000347048 MLECQ14165 292 aa30.59■■■□□ 2.49
PTPA-202ENST00000347048 IL27Q8NEV9 243 aa30.59■■■□□ 2.49
PTPA-202ENST00000347048 CHMP4BQ9H444 224 aaKnown RBP30.59■■■□□ 2.49
PTPA-202ENST00000347048 PRKAR2BP31323 418 aa30.59■■■□□ 2.49
PTPA-202ENST00000347048 TBC1D2Q9BYX2 928 aa30.59■■■□□ 2.49
PTPA-202ENST00000347048 EDC4Q6P2E9 1401 aaKnown RBP30.58■■■□□ 2.49
PTPA-202ENST00000347048 NFE2L2Q16236 605 aa30.57■■■□□ 2.48
PTPA-202ENST00000347048 CDK12Q9NYV4 1490 aaPredicted RBP30.57■■■□□ 2.48
PTPA-202ENST00000347048 CPSF1Q10570 1443 aaKnown RBP30.57■■■□□ 2.48
PTPA-202ENST00000347048 MAP2P11137 1827 aaKnown RBP30.56■■■□□ 2.48
PTPA-202ENST00000347048 ARHGAP45Q92619 1136 aa30.55■■■□□ 2.48
PTPA-202ENST00000347048 C22orf23Q9BZE7 217 aa30.55■■■□□ 2.48
PTPA-202ENST00000347048 AATKQ6ZMQ8 1374 aa30.55■■■□□ 2.48
PTPA-202ENST00000347048 SLKQ9H2G2 1235 aaPredicted RBP30.54■■■□□ 2.48
PTPA-202ENST00000347048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.54■■■□□ 2.48
PTPA-202ENST00000347048 PIK3R4Q99570 1358 aa30.53■■■□□ 2.48
PTPA-202ENST00000347048 NUCB1Q02818 461 aa30.53■■■□□ 2.48
PTPA-202ENST00000347048 IFT57Q9NWB7 429 aa30.52■■■□□ 2.48
PTPA-202ENST00000347048 PTCH1Q13635 1447 aa30.52■■■□□ 2.48
PTPA-202ENST00000347048 GNAI1P63096 354 aa30.51■■■□□ 2.47
PTPA-202ENST00000347048 WAPLQ7Z5K2 1190 aa30.51■■■□□ 2.47
PTPA-202ENST00000347048 KNDC1Q76NI1 1749 aa30.5■■■□□ 2.47
PTPA-202ENST00000347048 NRXN3Q9Y4C0 1643 aa30.49■■■□□ 2.47
PTPA-202ENST00000347048 WASLO00401 505 aaPredicted RBP30.48■■■□□ 2.47
PTPA-202ENST00000347048 IL13P35225 146 aa30.48■■■□□ 2.47
PTPA-202ENST00000347048 LMOD3Q0VAK6 560 aa30.48■■■□□ 2.47
PTPA-202ENST00000347048 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.48■■■□□ 2.47
PTPA-202ENST00000347048 MON2Q7Z3U7 1717 aa30.47■■■□□ 2.47
PTPA-202ENST00000347048 MFAP1P55081 439 aaKnown RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms