RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 RIMBP3CA6NJZ7 1639 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 RIMBP3BA6NNM3 1639 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 RIMBP3Q9UFD9 1639 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 UBE2Q2Q8WVN8 375 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 C1orf115Q9H7X2 142 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 POLKQ9UBT6 870 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 TSPYL4Q9UJ04 414 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 ABCC3O15438 1527 aa10.97□□□□□ -0.65
SKAP2-201ENST00000345317 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.65
SKAP2-201ENST00000345317 UNC13BO14795 1591 aa10.96□□□□□ -0.65
SKAP2-201ENST00000345317 E9PCH4 1651 aa10.96□□□□□ -0.66
SKAP2-201ENST00000345317 ARAP3Q8WWN8 1544 aa10.96□□□□□ -0.66
SKAP2-201ENST00000345317 SLC4A3P48751 1232 aa10.96□□□□□ -0.66
SKAP2-201ENST00000345317 PDE4AP27815 886 aa10.95□□□□□ -0.66
SKAP2-201ENST00000345317 TEFQ10587 303 aa10.95□□□□□ -0.66
SKAP2-201ENST00000345317 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
SKAP2-201ENST00000345317 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
SKAP2-201ENST00000345317 NOB1Q9ULX3 412 aaKnown RBP10.95□□□□□ -0.66
SKAP2-201ENST00000345317 GNAI1P63096 354 aa10.95□□□□□ -0.66
SKAP2-201ENST00000345317 TNNQ9UQP3 1299 aa10.95□□□□□ -0.66
SKAP2-201ENST00000345317 FCHSD2O94868 740 aa10.94□□□□□ -0.66
SKAP2-201ENST00000345317 CCDC9Q9Y3X0 531 aaKnown RBP10.94□□□□□ -0.66
SKAP2-201ENST00000345317 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
SKAP2-201ENST00000345317 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
SKAP2-201ENST00000345317 OS9Q13438 667 aaPredicted RBP10.93□□□□□ -0.66
SKAP2-201ENST00000345317 CENPQQ7L2Z9 268 aaPredicted RBP10.93□□□□□ -0.66
SKAP2-201ENST00000345317 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
SKAP2-201ENST00000345317 CFAP74Q9C0B2 1584 aa10.93□□□□□ -0.66
SKAP2-201ENST00000345317 TWISTNBQ3B726 338 aaPredicted RBP10.93□□□□□ -0.66
SKAP2-201ENST00000345317 TET3O43151 1660 aa10.93□□□□□ -0.66
SKAP2-201ENST00000345317 CEP152O94986 1710 aa10.93□□□□□ -0.66
SKAP2-201ENST00000345317 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 PKNOX2Q96KN3 472 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 KIDINS220Q9ULH0 1771 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 ANKRD45Q5TZF3 282 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 TMEM2Q9UHN6 1383 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 NFE2L2Q16236 605 aa10.92□□□□□ -0.66
SKAP2-201ENST00000345317 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
SKAP2-201ENST00000345317 RARSP54136 660 aaKnown RBP10.92□□□□□ -0.66
SKAP2-201ENST00000345317 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
SKAP2-201ENST00000345317 RNF17Q9BXT8 1623 aaKnown RBP10.91□□□□□ -0.66
SKAP2-201ENST00000345317 MFAP1P55081 439 aaKnown RBP10.91□□□□□ -0.66
SKAP2-201ENST00000345317 EVA1CP58658 441 aa10.91□□□□□ -0.66
SKAP2-201ENST00000345317 LNPKQ9C0E8 428 aa10.91□□□□□ -0.66
SKAP2-201ENST00000345317 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
SKAP2-201ENST00000345317 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
SKAP2-201ENST00000345317 ORAI2Q96SN7 254 aa10.9□□□□□ -0.66
SKAP2-201ENST00000345317 KIF1BO60333 1816 aa10.9□□□□□ -0.66
SKAP2-201ENST00000345317 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.67
SKAP2-201ENST00000345317 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.67
SKAP2-201ENST00000345317 TRPM1Q7Z4N2 1603 aa10.89□□□□□ -0.67
SKAP2-201ENST00000345317 SPHKAPQ2M3C7 1700 aa10.89□□□□□ -0.67
SKAP2-201ENST00000345317 AIMP1Q12904 312 aaKnown RBP10.89□□□□□ -0.67
SKAP2-201ENST00000345317 KRT24Q2M2I5 525 aa10.89□□□□□ -0.67
SKAP2-201ENST00000345317 RAPGEF4Q8WZA2 1011 aa10.89□□□□□ -0.67
SKAP2-201ENST00000345317 PPRC1Q5VV67 1664 aaKnown RBP10.89□□□□□ -0.67
SKAP2-201ENST00000345317 DDX19BQ9UMR2 479 aa10.89□□□□□ -0.67
SKAP2-201ENST00000345317 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
SKAP2-201ENST00000345317 SLC4A2P04920 1241 aa10.88□□□□□ -0.67
SKAP2-201ENST00000345317 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
SKAP2-201ENST00000345317 CHRNA2Q15822 529 aa10.88□□□□□ -0.67
SKAP2-201ENST00000345317 TBX22Q9Y458 520 aa10.88□□□□□ -0.67
SKAP2-201ENST00000345317 ZNF530Q6P9A1 599 aaPredicted RBP10.88□□□□□ -0.67
SKAP2-201ENST00000345317 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
SKAP2-201ENST00000345317 POLR3AO14802 1390 aaPredicted RBP10.87□□□□□ -0.67
SKAP2-201ENST00000345317 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
SKAP2-201ENST00000345317 CHMP4BQ9H444 224 aaKnown RBP10.87□□□□□ -0.67
SKAP2-201ENST00000345317 DIP2CQ9Y2E4 1556 aa10.87□□□□□ -0.67
SKAP2-201ENST00000345317 ATF7IPQ6VMQ6 1270 aa10.87□□□□□ -0.67
SKAP2-201ENST00000345317 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
SKAP2-201ENST00000345317 MYOM2P54296 1465 aa10.87□□□□□ -0.67
SKAP2-201ENST00000345317 ROBO2Q9HCK4 1378 aa10.87□□□□□ -0.67
SKAP2-201ENST00000345317 KIF16BQ96L93 1317 aa10.86□□□□□ -0.67
SKAP2-201ENST00000345317 KRT28Q7Z3Y7 464 aa10.86□□□□□ -0.67
SKAP2-201ENST00000345317 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
SKAP2-201ENST00000345317 PRR36Q9H6K5 1346 aa10.86□□□□□ -0.67
SKAP2-201ENST00000345317 NKTRP30414 1462 aaKnown RBP10.86□□□□□ -0.67
SKAP2-201ENST00000345317 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
SKAP2-201ENST00000345317 NSD2O96028 1365 aa10.86□□□□□ -0.67
SKAP2-201ENST00000345317 PDE3AQ14432 1141 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 MPRIPQ6WCQ1 1025 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 TSPYL6Q8N831 410 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 GAS2L2Q8NHY3 880 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 CHMP3Q9Y3E7 222 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 ABCC11Q96J66 1382 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 MAP3K19Q56UN5 1328 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 MAP3K4Q9Y6R4 1608 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
SKAP2-201ENST00000345317 RLBP1P12271 317 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 DDX54Q8TDD1 881 aaKnown RBP10.84□□□□□ -0.67
SKAP2-201ENST00000345317 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 NINLQ9Y2I6 1382 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 MADDQ8WXG6 1647 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 TRIM27P14373 513 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms