RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
CPSF4L-201ENST00000344935 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
CPSF4L-201ENST00000344935 POLR3AO14802 1390 aaPredicted RBP12.12□□□□□ -0.47
CPSF4L-201ENST00000344935 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
CPSF4L-201ENST00000344935 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
CPSF4L-201ENST00000344935 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
CPSF4L-201ENST00000344935 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
CPSF4L-201ENST00000344935 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
CPSF4L-201ENST00000344935 POGKQ9P215 609 aa12.1□□□□□ -0.47
CPSF4L-201ENST00000344935 PARP4Q9UKK3 1724 aaKnown RBP12.1□□□□□ -0.47
CPSF4L-201ENST00000344935 HRCP23327 699 aa12.09□□□□□ -0.47
CPSF4L-201ENST00000344935 BAG6P46379 1132 aa12.09□□□□□ -0.47
CPSF4L-201ENST00000344935 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
CPSF4L-201ENST00000344935 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
CPSF4L-201ENST00000344935 BTG4Q9NY30 223 aa12.08□□□□□ -0.48
CPSF4L-201ENST00000344935 BRD4O60885 1362 aaPredicted RBP12.07□□□□□ -0.48
CPSF4L-201ENST00000344935 CPDO75976 1380 aa12.07□□□□□ -0.48
CPSF4L-201ENST00000344935 SAFB2Q14151 953 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPSF4L-201ENST00000344935 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
CPSF4L-201ENST00000344935 WNK3Q9BYP7 1800 aa12.07□□□□□ -0.48
CPSF4L-201ENST00000344935 FAM98CQ17RN3 349 aaKnown RBP12.06□□□□□ -0.48
CPSF4L-201ENST00000344935 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
CPSF4L-201ENST00000344935 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
CPSF4L-201ENST00000344935 PEAK1Q9H792 1746 aa12.06□□□□□ -0.48
CPSF4L-201ENST00000344935 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
CPSF4L-201ENST00000344935 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
CPSF4L-201ENST00000344935 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
CPSF4L-201ENST00000344935 USP19O94966 1318 aa12.05□□□□□ -0.48
CPSF4L-201ENST00000344935 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
CPSF4L-201ENST00000344935 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
CPSF4L-201ENST00000344935 QRICH2Q9H0J4 1663 aa12.04□□□□□ -0.48
CPSF4L-201ENST00000344935 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
CPSF4L-201ENST00000344935 CAMTA1Q9Y6Y1 1673 aa12.03□□□□□ -0.48
CPSF4L-201ENST00000344935 SLIT3O75094 1523 aa12.03□□□□□ -0.48
CPSF4L-201ENST00000344935 BARGINQ6ZT62 677 aa12.03□□□□□ -0.48
CPSF4L-201ENST00000344935 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
CPSF4L-201ENST00000344935 SBF2Q86WG5 1849 aa12.02□□□□□ -0.48
CPSF4L-201ENST00000344935 LRRC37A3O60309 1634 aa12.02□□□□□ -0.49
CPSF4L-201ENST00000344935 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
CPSF4L-201ENST00000344935 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
CPSF4L-201ENST00000344935 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.49
CPSF4L-201ENST00000344935 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.49
CPSF4L-201ENST00000344935 ABCC6O95255 1503 aa12.01□□□□□ -0.49
CPSF4L-201ENST00000344935 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
CPSF4L-201ENST00000344935 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
CPSF4L-201ENST00000344935 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
CPSF4L-201ENST00000344935 COL18A1P39060 1754 aa12□□□□□ -0.49
CPSF4L-201ENST00000344935 A0A0G2JS52 829 aa12□□□□□ -0.49
CPSF4L-201ENST00000344935 MYT1Q01538 1121 aa12□□□□□ -0.49
CPSF4L-201ENST00000344935 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
CPSF4L-201ENST00000344935 PIK3C2AO00443 1686 aa12□□□□□ -0.49
CPSF4L-201ENST00000344935 USP54Q70EL1 1684 aa12□□□□□ -0.49
CPSF4L-201ENST00000344935 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
CPSF4L-201ENST00000344935 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
CPSF4L-201ENST00000344935 BCL9O00512 1426 aa11.99□□□□□ -0.49
CPSF4L-201ENST00000344935 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
CPSF4L-201ENST00000344935 AKAP12Q02952 1782 aa11.99□□□□□ -0.49
CPSF4L-201ENST00000344935 ACEP12821 1306 aa11.98□□□□□ -0.49
CPSF4L-201ENST00000344935 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
CPSF4L-201ENST00000344935 USP6P35125 1406 aa11.97□□□□□ -0.49
CPSF4L-201ENST00000344935 CRB1P82279 1406 aa11.97□□□□□ -0.49
CPSF4L-201ENST00000344935 PPIP5K1Q6PFW1 1433 aa11.97□□□□□ -0.49
CPSF4L-201ENST00000344935 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
CPSF4L-201ENST00000344935 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
CPSF4L-201ENST00000344935 OVOS2A0A0G2JMS6 1433 aa11.96□□□□□ -0.49
CPSF4L-201ENST00000344935 OVOS2A0A0J9YW53 1432 aa11.96□□□□□ -0.49
CPSF4L-201ENST00000344935 OVOS2Q6IE36 1432 aa11.96□□□□□ -0.49
CPSF4L-201ENST00000344935 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
CPSF4L-201ENST00000344935 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.49
CPSF4L-201ENST00000344935 CDK19Q9BWU1 502 aa11.96□□□□□ -0.49
CPSF4L-201ENST00000344935 AATKQ6ZMQ8 1374 aa11.95□□□□□ -0.5
CPSF4L-201ENST00000344935 TCP11L2Q8N4U5 519 aa11.95□□□□□ -0.5
CPSF4L-201ENST00000344935 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
CPSF4L-201ENST00000344935 R3HDM1Q15032 1099 aaKnown RBP11.94□□□□□ -0.5
CPSF4L-201ENST00000344935 CHRNA2Q15822 529 aa11.94□□□□□ -0.5
CPSF4L-201ENST00000344935 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
CPSF4L-201ENST00000344935 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
CPSF4L-201ENST00000344935 CENPJQ9HC77 1338 aaPredicted RBP11.93□□□□□ -0.5
CPSF4L-201ENST00000344935 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
CPSF4L-201ENST00000344935 FAM182BQ5T319 152 aa11.93□□□□□ -0.5
CPSF4L-201ENST00000344935 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
CPSF4L-201ENST00000344935 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 NFAT5O94916 1531 aa11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 TRIM37O94972 964 aa11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 GCP02774 474 aa11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 STRN4Q9NRL3 753 aa11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 CPSF1Q10570 1443 aaKnown RBP11.92□□□□□ -0.5
CPSF4L-201ENST00000344935 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
CPSF4L-201ENST00000344935 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
CPSF4L-201ENST00000344935 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
CPSF4L-201ENST00000344935 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
CPSF4L-201ENST00000344935 APBA3O96018 575 aa11.9□□□□□ -0.5
CPSF4L-201ENST00000344935 SBNO2Q9Y2G9 1366 aa11.9□□□□□ -0.5
CPSF4L-201ENST00000344935 PLSCR1O15162 318 aa11.89□□□□□ -0.51
CPSF4L-201ENST00000344935 EVA1CP58658 441 aa11.89□□□□□ -0.51
CPSF4L-201ENST00000344935 NBPF14Q5TI25 921 aa11.88□□□□□ -0.51
CPSF4L-201ENST00000344935 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
CPSF4L-201ENST00000344935 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms