RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 DMTNQ08495 405 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 AMOTL2Q9Y2J4 779 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 TBC1D32Q96NH3 1257 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 CAMSAP1Q5T5Y3 1602 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 IGHDP01880 384 aa11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 UTP14CQ5TAP6 766 aaKnown RBP11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
AC008543.1-201ENST00000344893 RPGRIP1LQ68CZ1 1315 aa11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 CCDC173Q0VFZ6 552 aa11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 METP08581 1390 aa11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
AC008543.1-201ENST00000344893 MORC1Q86VD1 984 aa11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 SYNMO15061 1565 aa11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 VIRMAQ69YN4 1812 aaKnown RBP11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 ANKLE2Q86XL3 938 aa11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 SCAF11Q99590 1463 aaKnown RBP11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
AC008543.1-201ENST00000344893 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
AC008543.1-201ENST00000344893 KCNA6P17658 529 aa11.3□□□□□ -0.6
AC008543.1-201ENST00000344893 KIF1BO60333 1816 aa11.3□□□□□ -0.6
AC008543.1-201ENST00000344893 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
AC008543.1-201ENST00000344893 VWDEQ8N2E2 1590 aa11.3□□□□□ -0.6
AC008543.1-201ENST00000344893 PPP1R9BQ96SB3 815 aa11.3□□□□□ -0.6
AC008543.1-201ENST00000344893 ZMYM4Q5VZL5 1548 aa11.29□□□□□ -0.6
AC008543.1-201ENST00000344893 PPP4R3BQ5MIZ7 849 aa11.29□□□□□ -0.6
AC008543.1-201ENST00000344893 DUSP27Q5VZP5 1158 aa11.29□□□□□ -0.6
AC008543.1-201ENST00000344893 ANP32BQ92688 251 aaKnown RBP11.29□□□□□ -0.6
AC008543.1-201ENST00000344893 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
AC008543.1-201ENST00000344893 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
AC008543.1-201ENST00000344893 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
AC008543.1-201ENST00000344893 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
AC008543.1-201ENST00000344893 DYNC1I1O14576 645 aa11.28□□□□□ -0.6
AC008543.1-201ENST00000344893 NGDNQ8NEJ9 315 aaKnown RBP11.28□□□□□ -0.6
AC008543.1-201ENST00000344893 PARD3Q8TEW0 1356 aa11.27□□□□□ -0.6
AC008543.1-201ENST00000344893 TMEM2Q9UHN6 1383 aa11.27□□□□□ -0.6
AC008543.1-201ENST00000344893 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
AC008543.1-201ENST00000344893 A2ML1A8K2U0 1454 aa11.27□□□□□ -0.6
AC008543.1-201ENST00000344893 WDR43Q15061 677 aaKnown RBP eCLIP11.27□□□□□ -0.61
AC008543.1-201ENST00000344893 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.61
AC008543.1-201ENST00000344893 TAF7LQ5H9L4 462 aa11.26□□□□□ -0.61
AC008543.1-201ENST00000344893 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
AC008543.1-201ENST00000344893 PIK3C2GO75747 1445 aa11.26□□□□□ -0.61
AC008543.1-201ENST00000344893 MYO5BQ9ULV0 1848 aa11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 YTHDC2Q9H6S0 1430 aaKnown RBP11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 TMEM51Q9NW97 253 aa11.25□□□□□ -0.61
AC008543.1-201ENST00000344893 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 PIK3C2BO00750 1634 aa11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 HDGFL2Q7Z4V5 671 aaPredicted RBP11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 ADGRB3O60242 1522 aa11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 TNPO1Q92973 898 aaKnown RBP11.24□□□□□ -0.61
AC008543.1-201ENST00000344893 KIF20AO95235 890 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 SKOR2Q2VWA4 1001 aaPredicted RBP11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 NSD3Q9BZ95 1437 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 BCAR3O75815 825 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 NME9Q86XW9 330 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 LTV1Q96GA3 475 aaPredicted RBP11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 ADAMTS8Q9UP79 889 aa11.23□□□□□ -0.61
AC008543.1-201ENST00000344893 VGLL3A8MV65 326 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 NOL7Q9UMY1 257 aaKnown RBP11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 INSRP06213 1382 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 GTPBP4Q9BZE4 634 aaKnown RBP11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 AGLP35573 1532 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 CBX1P83916 185 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 RRS1Q15050 365 aaKnown RBP11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 C22orf23Q9BZE7 217 aa11.22□□□□□ -0.61
AC008543.1-201ENST00000344893 WASLO00401 505 aaPredicted RBP11.21□□□□□ -0.61
AC008543.1-201ENST00000344893 MTHFSP49914 203 aa11.21□□□□□ -0.61
AC008543.1-201ENST00000344893 CLUAP1Q96AJ1 413 aa11.21□□□□□ -0.61
AC008543.1-201ENST00000344893 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
AC008543.1-201ENST00000344893 RIMS1Q86UR5 1692 aaKnown RBP11.21□□□□□ -0.62
AC008543.1-201ENST00000344893 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.62
AC008543.1-201ENST00000344893 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.62
AC008543.1-201ENST00000344893 FOXO3O43524 673 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms