RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RALGAPBQ86X10 1494 aa20.75■□□□□ 0.91
HMGN3-202ENST00000344726 PPP4R3CPQ6ZMV5 832 aa20.74■□□□□ 0.91
HMGN3-202ENST00000344726 UNC5CLQ8IV45 518 aa20.74■□□□□ 0.91
HMGN3-202ENST00000344726 POLR3AO14802 1390 aaPredicted RBP20.73■□□□□ 0.91
HMGN3-202ENST00000344726 NRAPQ86VF7 1730 aa20.73■□□□□ 0.91
HMGN3-202ENST00000344726 HAP1P54257 671 aaPredicted RBP20.73■□□□□ 0.91
HMGN3-202ENST00000344726 GJD4Q96KN9 370 aaPredicted RBP20.73■□□□□ 0.91
HMGN3-202ENST00000344726 FAM83GA6ND36 823 aa20.71■□□□□ 0.91
HMGN3-202ENST00000344726 ACEP12821 1306 aa20.71■□□□□ 0.91
HMGN3-202ENST00000344726 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
HMGN3-202ENST00000344726 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
HMGN3-202ENST00000344726 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
HMGN3-202ENST00000344726 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
HMGN3-202ENST00000344726 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
HMGN3-202ENST00000344726 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
HMGN3-202ENST00000344726 COL14A1Q05707 1796 aaKnown RBP20.69■□□□□ 0.9
HMGN3-202ENST00000344726 TONSLQ96HA7 1378 aa20.68■□□□□ 0.9
HMGN3-202ENST00000344726 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
HMGN3-202ENST00000344726 EP400Q96L91 3159 aa20.68■□□□□ 0.9
HMGN3-202ENST00000344726 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
HMGN3-202ENST00000344726 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
HMGN3-202ENST00000344726 VPS72Q15906 364 aa20.66■□□□□ 0.9
HMGN3-202ENST00000344726 ATAD2Q6PL18 1390 aa20.66■□□□□ 0.9
HMGN3-202ENST00000344726 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.89
HMGN3-202ENST00000344726 NRKQ7Z2Y5 1582 aa20.63■□□□□ 0.89
HMGN3-202ENST00000344726 BTG4Q9NY30 223 aa20.63■□□□□ 0.89
HMGN3-202ENST00000344726 KIAA0232Q92628 1395 aa20.6■□□□□ 0.89
HMGN3-202ENST00000344726 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
HMGN3-202ENST00000344726 ONECUT3O60422 494 aaPredicted RBP20.58■□□□□ 0.89
HMGN3-202ENST00000344726 SEPT12Q8IYM1 358 aa20.58■□□□□ 0.89
HMGN3-202ENST00000344726 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.89
HMGN3-202ENST00000344726 CCDC9Q9Y3X0 531 aaKnown RBP20.58■□□□□ 0.89
HMGN3-202ENST00000344726 USP6P35125 1406 aa20.58■□□□□ 0.88
HMGN3-202ENST00000344726 SSH2Q76I76 1423 aa20.58■□□□□ 0.88
HMGN3-202ENST00000344726 USP19O94966 1318 aa20.57■□□□□ 0.88
HMGN3-202ENST00000344726 EVC2Q86UK5 1308 aa20.57■□□□□ 0.88
HMGN3-202ENST00000344726 CHRNA2Q15822 529 aa20.57■□□□□ 0.88
HMGN3-202ENST00000344726 PRDM11Q9NQV5 511 aa20.57■□□□□ 0.88
HMGN3-202ENST00000344726 ZC3H6P61129 1189 aaKnown RBP20.56■□□□□ 0.88
HMGN3-202ENST00000344726 ABTB2Q8N961 1025 aa20.56■□□□□ 0.88
HMGN3-202ENST00000344726 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
HMGN3-202ENST00000344726 PIK3C2AO00443 1686 aa20.56■□□□□ 0.88
HMGN3-202ENST00000344726 LMO7Q8WWI1 1683 aa20.56■□□□□ 0.88
HMGN3-202ENST00000344726 AKAP12Q02952 1782 aa20.56■□□□□ 0.88
HMGN3-202ENST00000344726 THSD7AQ9UPZ6 1657 aa20.54■□□□□ 0.88
HMGN3-202ENST00000344726 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
HMGN3-202ENST00000344726 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
HMGN3-202ENST00000344726 FAM98CQ17RN3 349 aaKnown RBP20.53■□□□□ 0.88
HMGN3-202ENST00000344726 SBNO2Q9Y2G9 1366 aa20.53■□□□□ 0.88
HMGN3-202ENST00000344726 CAMTA1Q9Y6Y1 1673 aa20.53■□□□□ 0.88
HMGN3-202ENST00000344726 SLIT3O75094 1523 aa20.53■□□□□ 0.88
HMGN3-202ENST00000344726 BRD4O60885 1362 aaPredicted RBP20.52■□□□□ 0.88
HMGN3-202ENST00000344726 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.88
HMGN3-202ENST00000344726 CPDO75976 1380 aa20.51■□□□□ 0.87
HMGN3-202ENST00000344726 CPSF1Q10570 1443 aaKnown RBP20.5■□□□□ 0.87
HMGN3-202ENST00000344726 GCP02774 474 aa20.49■□□□□ 0.87
HMGN3-202ENST00000344726 MON2Q7Z3U7 1717 aa20.49■□□□□ 0.87
HMGN3-202ENST00000344726 BLMP54132 1417 aaPredicted RBP20.48■□□□□ 0.87
HMGN3-202ENST00000344726 KRT27Q7Z3Y8 459 aa20.48■□□□□ 0.87
HMGN3-202ENST00000344726 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
HMGN3-202ENST00000344726 STRN4Q9NRL3 753 aa20.48■□□□□ 0.87
HMGN3-202ENST00000344726 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
HMGN3-202ENST00000344726 SPATA31A1Q5TZJ5 1347 aa20.48■□□□□ 0.87
HMGN3-202ENST00000344726 A0A0G2JS52 829 aa20.46■□□□□ 0.87
HMGN3-202ENST00000344726 MYT1Q01538 1121 aa20.46■□□□□ 0.87
HMGN3-202ENST00000344726 TTC21BQ7Z4L5 1316 aa20.46■□□□□ 0.87
HMGN3-202ENST00000344726 COL18A1P39060 1754 aa20.45■□□□□ 0.86
HMGN3-202ENST00000344726 NLRP6P59044 892 aa20.45■□□□□ 0.86
HMGN3-202ENST00000344726 COL5A2P05997 1499 aaPredicted RBP20.44■□□□□ 0.86
HMGN3-202ENST00000344726 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
HMGN3-202ENST00000344726 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
HMGN3-202ENST00000344726 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
HMGN3-202ENST00000344726 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
HMGN3-202ENST00000344726 TESK2Q96S53 571 aa20.43■□□□□ 0.86
HMGN3-202ENST00000344726 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
HMGN3-202ENST00000344726 DEFB132Q7Z7B7 95 aa20.42■□□□□ 0.86
HMGN3-202ENST00000344726 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
HMGN3-202ENST00000344726 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
HMGN3-202ENST00000344726 USP35Q9P2H5 1018 aa20.41■□□□□ 0.86
HMGN3-202ENST00000344726 NFAT5O94916 1531 aa20.41■□□□□ 0.86
HMGN3-202ENST00000344726 USP54Q70EL1 1684 aa20.4■□□□□ 0.86
HMGN3-202ENST00000344726 AATKQ6ZMQ8 1374 aa20.39■□□□□ 0.85
HMGN3-202ENST00000344726 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
HMGN3-202ENST00000344726 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.85
HMGN3-202ENST00000344726 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
HMGN3-202ENST00000344726 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.85
HMGN3-202ENST00000344726 EVA1CP58658 441 aa20.38■□□□□ 0.85
HMGN3-202ENST00000344726 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
HMGN3-202ENST00000344726 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
HMGN3-202ENST00000344726 RGPD5Q99666 1765 aa20.38■□□□□ 0.85
HMGN3-202ENST00000344726 USP47Q96K76 1375 aa20.37■□□□□ 0.85
HMGN3-202ENST00000344726 RGPD1P0DJD0 1748 aa20.37■□□□□ 0.85
HMGN3-202ENST00000344726 BARGINQ6ZT62 677 aa20.37■□□□□ 0.85
HMGN3-202ENST00000344726 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
HMGN3-202ENST00000344726 A0A1W2PP64 1363 aa20.36■□□□□ 0.85
HMGN3-202ENST00000344726 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
HMGN3-202ENST00000344726 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
HMGN3-202ENST00000344726 CRB1P82279 1406 aa20.36■□□□□ 0.85
HMGN3-202ENST00000344726 SOX12O15370 315 aa20.35■□□□□ 0.85
HMGN3-202ENST00000344726 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms