RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 RIPPLY1Q0D2K3 151 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 STAG1Q8WVM7 1258 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 PAF1Q8N7H5 531 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 IRX1P78414 480 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 PPM1EQ8WY54 764 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 LRCH2Q5VUJ6 765 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 RNF216Q9NWF9 866 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 ANKRD20A12PQ8NF67 263 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 TEX13AQ9BXU3 409 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 ANKRD30AQ9BXX3 1397 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 YY1P25490 414 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 NASPP49321 788 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 SWT1Q5T5J6 900 aaKnown RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 CCDC30Q5VVM6 783 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 CDK5RAP3Q96JB5 506 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 TNNT1P13805 278 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 PSMD7P51665 324 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 NAP1L1P55209 391 aaKnown RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 NBPF10Q6P3W6 841 aaKnown RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 PPP1R9BQ96SB3 815 aa4.48□□□□□ -1.69
SYNE2-202ENST00000344113 SMG6Q86US8 1419 aaKnown RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 CT47A1Q5JQC4 288 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 CWC22Q9HCG8 908 aaKnown RBP4.48□□□□□ -1.69
SYNE2-202ENST00000344113 JADE2Q9NQC1 790 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 KRT222Q8N1A0 295 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 ENOX2Q16206 610 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 MUM1L1Q5H9M0 696 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 SPC24Q8NBT2 197 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 SAMD1Q6SPF0 538 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 FAM184BQ9ULE4 1060 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 GORABQ5T7V8 394 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 NRDE2Q9H7Z3 1164 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 POTEB2H3BUK9 544 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 NAT10Q9H0A0 1025 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 ZMYM4Q5VZL5 1548 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 GOLGA2Q08379 1002 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 SLFNL1Q499Z3 407 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 USP25Q9UHP3 1055 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 MKRN1Q9UHC7 482 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 CLEC17AQ6ZS10 378 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 PLEKHD1A6NEE1 506 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 ERLIN2O94905 339 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 LZICQ8WZA0 190 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 CCDC114Q96M63 670 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 MPHOSPH6Q99547 160 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 GBP3Q9H0R5 595 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 CFAP45Q9UL16 551 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 BANK1Q8NDB2 785 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 ANKRD27Q96NW4 1050 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 CEP89Q96ST8 783 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 HOOK1Q9UJC3 728 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 CLASRPQ8N2M8 674 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 TBC1D22AQ8WUA7 517 aa4.47□□□□□ -1.69
SYNE2-202ENST00000344113 RSRC1Q96IZ7 334 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 SRRTQ9BXP5 876 aaKnown RBP4.47□□□□□ -1.69
SYNE2-202ENST00000344113 TONSLQ96HA7 1378 aa4.46□□□□□ -1.69
SYNE2-202ENST00000344113 DKK3Q9UBP4 350 aa4.46□□□□□ -1.69
SYNE2-202ENST00000344113 FMNL2Q96PY5 1086 aa4.46□□□□□ -1.69
SYNE2-202ENST00000344113 MCM6Q14566 821 aa4.46□□□□□ -1.69
SYNE2-202ENST00000344113 MYRIPQ8NFW9 859 aa4.46□□□□□ -1.69
SYNE2-202ENST00000344113 TSHZ1Q6ZSZ6 1077 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 PLIN1O60240 522 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 TAX1BP1Q86VP1 789 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-202ENST00000344113 CEP57Q86XR8 500 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 P3H3Q8IVL6 736 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 EXOC8Q8IYI6 725 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 CEP126Q9P2H0 1117 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 DAAM2Q86T65 1068 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 YEATS2Q9ULM3 1422 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 ITPRIPQ8IWB1 547 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 KCNJ4P48050 445 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 MCM2P49736 904 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 ROCK1Q13464 1354 aa4.46□□□□□ -1.7
SYNE2-202ENST00000344113 ZSCAN20P17040 1043 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-202ENST00000344113 ARID4AP29374 1257 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-202ENST00000344113 CCNB3Q8WWL7 1395 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 GIGYF2Q6Y7W6 1299 aaKnown RBP4.45□□□□□ -1.7
SYNE2-202ENST00000344113 CEP104O60308 925 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 SMC1AQ14683 1233 aaKnown RBP4.45□□□□□ -1.7
SYNE2-202ENST00000344113 ZNF592Q92610 1267 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 ELP1O95163 1332 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 LUC7L3O95232 432 aaKnown RBP4.45□□□□□ -1.7
SYNE2-202ENST00000344113 GRPEL1Q9HAV7 217 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 BLVRAP53004 296 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 ZNF280CQ8ND82 737 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC112Q8NEF3 446 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 BATF3Q9NR55 127 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 A0A1B0GUL7 405 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 TAF7Q15545 349 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-202ENST00000344113 CTDP1Q9Y5B0 961 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-202ENST00000344113 TUBB2AQ13885 445 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 PDCD7Q8N8D1 485 aaKnown RBP4.45□□□□□ -1.7
SYNE2-202ENST00000344113 ZBTB9Q96C00 473 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 TUBB2BQ9BVA1 445 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 CARD10Q9BWT7 1032 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC146Q8IYE0 955 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms