RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
MS4A4A-202ENST00000343968 KIF1AQ12756 1690 aa18.65■□□□□ 0.58
MS4A4A-202ENST00000343968 ATF3P18847 181 aa18.64■□□□□ 0.57
MS4A4A-202ENST00000343968 MORC1Q86VD1 984 aa18.64■□□□□ 0.57
MS4A4A-202ENST00000343968 PMFBP1Q8TBY8 1022 aa18.64■□□□□ 0.57
MS4A4A-202ENST00000343968 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
MS4A4A-202ENST00000343968 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
MS4A4A-202ENST00000343968 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
MS4A4A-202ENST00000343968 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
MS4A4A-202ENST00000343968 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
MS4A4A-202ENST00000343968 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
MS4A4A-202ENST00000343968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
MS4A4A-202ENST00000343968 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
MS4A4A-202ENST00000343968 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
MS4A4A-202ENST00000343968 PNISRQ8TF01 805 aaKnown RBP18.6■□□□□ 0.57
MS4A4A-202ENST00000343968 OVOS2A0A0J9YW53 1432 aa18.59■□□□□ 0.57
MS4A4A-202ENST00000343968 OVOS2Q6IE36 1432 aa18.59■□□□□ 0.57
MS4A4A-202ENST00000343968 NME9Q86XW9 330 aa18.58■□□□□ 0.57
MS4A4A-202ENST00000343968 ORAI2Q96SN7 254 aa18.58■□□□□ 0.57
MS4A4A-202ENST00000343968 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
MS4A4A-202ENST00000343968 INSRP06213 1382 aa18.56■□□□□ 0.56
MS4A4A-202ENST00000343968 COG3Q96JB2 828 aa18.56■□□□□ 0.56
MS4A4A-202ENST00000343968 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
MS4A4A-202ENST00000343968 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
MS4A4A-202ENST00000343968 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
MS4A4A-202ENST00000343968 PSME1Q06323 249 aa18.53■□□□□ 0.56
MS4A4A-202ENST00000343968 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
MS4A4A-202ENST00000343968 MTHFSP49914 203 aa18.51■□□□□ 0.55
MS4A4A-202ENST00000343968 SLAIN2Q9P270 581 aa18.51■□□□□ 0.55
MS4A4A-202ENST00000343968 MARF1Q9Y4F3 1742 aaKnown RBP18.51■□□□□ 0.55
MS4A4A-202ENST00000343968 PNPLA6Q8IY17 1366 aa18.51■□□□□ 0.55
MS4A4A-202ENST00000343968 FOXO3O43524 673 aa18.5■□□□□ 0.55
MS4A4A-202ENST00000343968 TNNT2P45379 298 aaPredicted RBP18.5■□□□□ 0.55
MS4A4A-202ENST00000343968 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
MS4A4A-202ENST00000343968 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
MS4A4A-202ENST00000343968 SBNO1A3KN83 1393 aa18.49■□□□□ 0.55
MS4A4A-202ENST00000343968 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
MS4A4A-202ENST00000343968 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
MS4A4A-202ENST00000343968 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
MS4A4A-202ENST00000343968 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
MS4A4A-202ENST00000343968 POLKQ9UBT6 870 aa18.48■□□□□ 0.55
MS4A4A-202ENST00000343968 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
MS4A4A-202ENST00000343968 ALS2Q96Q42 1657 aa18.47■□□□□ 0.55
MS4A4A-202ENST00000343968 PXDNQ92626 1479 aa18.47■□□□□ 0.55
MS4A4A-202ENST00000343968 ABTB2Q8N961 1025 aa18.47■□□□□ 0.55
MS4A4A-202ENST00000343968 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
MS4A4A-202ENST00000343968 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
MS4A4A-202ENST00000343968 NLRP6P59044 892 aa18.46■□□□□ 0.55
MS4A4A-202ENST00000343968 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
MS4A4A-202ENST00000343968 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
MS4A4A-202ENST00000343968 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
MS4A4A-202ENST00000343968 SLIT3O75094 1523 aa18.44■□□□□ 0.54
MS4A4A-202ENST00000343968 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
MS4A4A-202ENST00000343968 BLMP54132 1417 aaPredicted RBP18.44■□□□□ 0.54
MS4A4A-202ENST00000343968 KIF24Q5T7B8 1368 aa18.43■□□□□ 0.54
MS4A4A-202ENST00000343968 SOS2Q07890 1332 aaPredicted RBP18.43■□□□□ 0.54
MS4A4A-202ENST00000343968 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
MS4A4A-202ENST00000343968 USP19O94966 1318 aa18.42■□□□□ 0.54
MS4A4A-202ENST00000343968 TNS3Q68CZ2 1445 aa18.42■□□□□ 0.54
MS4A4A-202ENST00000343968 FBLN1P23142 703 aa18.41■□□□□ 0.54
MS4A4A-202ENST00000343968 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
MS4A4A-202ENST00000343968 EMILIN1Q9Y6C2 1016 aa18.41■□□□□ 0.54
MS4A4A-202ENST00000343968 NFAT5O94916 1531 aa18.4■□□□□ 0.54
MS4A4A-202ENST00000343968 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
MS4A4A-202ENST00000343968 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
MS4A4A-202ENST00000343968 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
MS4A4A-202ENST00000343968 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
MS4A4A-202ENST00000343968 PHRF1Q9P1Y6 1649 aaKnown RBP18.39■□□□□ 0.53
MS4A4A-202ENST00000343968 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
MS4A4A-202ENST00000343968 PEAK1Q9H792 1746 aa18.39■□□□□ 0.53
MS4A4A-202ENST00000343968 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.53
MS4A4A-202ENST00000343968 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
MS4A4A-202ENST00000343968 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
MS4A4A-202ENST00000343968 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
MS4A4A-202ENST00000343968 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
MS4A4A-202ENST00000343968 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
MS4A4A-202ENST00000343968 NUTM2GQ5VZR2 741 aa18.37■□□□□ 0.53
MS4A4A-202ENST00000343968 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
MS4A4A-202ENST00000343968 FLT4P35916 1363 aa18.37■□□□□ 0.53
MS4A4A-202ENST00000343968 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
MS4A4A-202ENST00000343968 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
MS4A4A-202ENST00000343968 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
MS4A4A-202ENST00000343968 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
MS4A4A-202ENST00000343968 IL13P35225 146 aa18.35■□□□□ 0.53
MS4A4A-202ENST00000343968 GCP02774 474 aa18.34■□□□□ 0.53
MS4A4A-202ENST00000343968 MYT1Q01538 1121 aa18.34■□□□□ 0.53
MS4A4A-202ENST00000343968 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
MS4A4A-202ENST00000343968 TOM1O60784 492 aa18.33■□□□□ 0.52
MS4A4A-202ENST00000343968 LTN1O94822 1766 aa18.33■□□□□ 0.52
MS4A4A-202ENST00000343968 ARHGEF25Q86VW2 580 aa18.31■□□□□ 0.52
MS4A4A-202ENST00000343968 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
MS4A4A-202ENST00000343968 HOXC9P31274 260 aa18.31■□□□□ 0.52
MS4A4A-202ENST00000343968 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
MS4A4A-202ENST00000343968 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
MS4A4A-202ENST00000343968 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
MS4A4A-202ENST00000343968 SOX12O15370 315 aa18.3■□□□□ 0.52
MS4A4A-202ENST00000343968 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
MS4A4A-202ENST00000343968 AMPHP49418 695 aa18.3■□□□□ 0.52
MS4A4A-202ENST00000343968 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
MS4A4A-202ENST00000343968 IP6K1Q92551 441 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms