RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 POLR3AO14802 1390 aaPredicted RBP24.24■■□□□ 1.47
CD55-202ENST00000343420 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
CD55-202ENST00000343420 GJD4Q96KN9 370 aaPredicted RBP24.23■■□□□ 1.47
CD55-202ENST00000343420 ACEP12821 1306 aa24.22■■□□□ 1.47
CD55-202ENST00000343420 CRYBG1Q9Y4K1 1723 aa24.21■■□□□ 1.47
CD55-202ENST00000343420 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
CD55-202ENST00000343420 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
CD55-202ENST00000343420 FAM83GA6ND36 823 aa24.19■■□□□ 1.46
CD55-202ENST00000343420 RALGAPBQ86X10 1494 aa24.19■■□□□ 1.46
CD55-202ENST00000343420 PPIP5K1Q6PFW1 1433 aa24.18■■□□□ 1.46
CD55-202ENST00000343420 GLI3P10071 1580 aa24.18■■□□□ 1.46
CD55-202ENST00000343420 TONSLQ96HA7 1378 aa24.17■■□□□ 1.46
CD55-202ENST00000343420 COL14A1Q05707 1796 aaKnown RBP24.17■■□□□ 1.46
CD55-202ENST00000343420 VPS72Q15906 364 aa24.16■■□□□ 1.46
CD55-202ENST00000343420 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
CD55-202ENST00000343420 EVC2Q86UK5 1308 aa24.15■■□□□ 1.46
CD55-202ENST00000343420 NRAPQ86VF7 1730 aa24.14■■□□□ 1.45
CD55-202ENST00000343420 PHRF1Q9P1Y6 1649 aaKnown RBP24.13■■□□□ 1.45
CD55-202ENST00000343420 BTG4Q9NY30 223 aa24.12■■□□□ 1.45
CD55-202ENST00000343420 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
CD55-202ENST00000343420 CCDC9Q9Y3X0 531 aaKnown RBP24.11■■□□□ 1.45
CD55-202ENST00000343420 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
CD55-202ENST00000343420 NUTM2GQ5VZR2 741 aa24.1■■□□□ 1.45
CD55-202ENST00000343420 ABTB2Q8N961 1025 aa24.1■■□□□ 1.45
CD55-202ENST00000343420 CARD11Q9BXL7 1154 aa24.1■■□□□ 1.45
CD55-202ENST00000343420 PRDM11Q9NQV5 511 aa24.09■■□□□ 1.45
CD55-202ENST00000343420 BRWD3Q6RI45 1802 aa24.09■■□□□ 1.45
CD55-202ENST00000343420 KIAA0232Q92628 1395 aa24.06■■□□□ 1.44
CD55-202ENST00000343420 ONECUT3O60422 494 aaPredicted RBP24.06■■□□□ 1.44
CD55-202ENST00000343420 USP6P35125 1406 aa24.06■■□□□ 1.44
CD55-202ENST00000343420 SBNO2Q9Y2G9 1366 aa24.05■■□□□ 1.44
CD55-202ENST00000343420 SEPT12Q8IYM1 358 aa24.05■■□□□ 1.44
CD55-202ENST00000343420 ZC3H6P61129 1189 aaKnown RBP24.04■■□□□ 1.44
CD55-202ENST00000343420 NLRP13Q86W25 1043 aa24.04■■□□□ 1.44
CD55-202ENST00000343420 USP19O94966 1318 aa24.04■■□□□ 1.44
CD55-202ENST00000343420 NRKQ7Z2Y5 1582 aa24.03■■□□□ 1.44
CD55-202ENST00000343420 AKAP12Q02952 1782 aa24.03■■□□□ 1.44
CD55-202ENST00000343420 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
CD55-202ENST00000343420 EP400Q96L91 3159 aa24.01■■□□□ 1.43
CD55-202ENST00000343420 ZNF692Q9BU19 519 aaPredicted RBP24.01■■□□□ 1.43
CD55-202ENST00000343420 SSH2Q76I76 1423 aa24.01■■□□□ 1.43
CD55-202ENST00000343420 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
CD55-202ENST00000343420 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
CD55-202ENST00000343420 CCDC125Q86Z20 511 aa23.99■■□□□ 1.43
CD55-202ENST00000343420 CPDO75976 1380 aa23.99■■□□□ 1.43
CD55-202ENST00000343420 GCP02774 474 aa23.98■■□□□ 1.43
CD55-202ENST00000343420 FAM98CQ17RN3 349 aaKnown RBP23.98■■□□□ 1.43
CD55-202ENST00000343420 PIK3C2AO00443 1686 aa23.97■■□□□ 1.43
CD55-202ENST00000343420 NLRP6P59044 892 aa23.97■■□□□ 1.43
CD55-202ENST00000343420 KRT27Q7Z3Y8 459 aa23.96■■□□□ 1.43
CD55-202ENST00000343420 CPSF1Q10570 1443 aaKnown RBP23.95■■□□□ 1.42
CD55-202ENST00000343420 A0A0G2JS52 829 aa23.95■■□□□ 1.42
CD55-202ENST00000343420 MYT1Q01538 1121 aa23.95■■□□□ 1.42
CD55-202ENST00000343420 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
CD55-202ENST00000343420 LMO7Q8WWI1 1683 aa23.95■■□□□ 1.42
CD55-202ENST00000343420 SLIT3O75094 1523 aa23.94■■□□□ 1.42
CD55-202ENST00000343420 TTC21BQ7Z4L5 1316 aa23.94■■□□□ 1.42
CD55-202ENST00000343420 CAMTA1Q9Y6Y1 1673 aa23.93■■□□□ 1.42
CD55-202ENST00000343420 SPATA31A1Q5TZJ5 1347 aa23.93■■□□□ 1.42
CD55-202ENST00000343420 EVA1CP58658 441 aa23.93■■□□□ 1.42
CD55-202ENST00000343420 MON2Q7Z3U7 1717 aa23.93■■□□□ 1.42
CD55-202ENST00000343420 KTN1Q86UP2 1357 aaKnown RBP23.92■■□□□ 1.42
CD55-202ENST00000343420 TTC21AQ8NDW8 1320 aa23.92■■□□□ 1.42
CD55-202ENST00000343420 THSD7AQ9UPZ6 1657 aa23.92■■□□□ 1.42
CD55-202ENST00000343420 BLMP54132 1417 aaPredicted RBP23.92■■□□□ 1.42
CD55-202ENST00000343420 PUS7Q96PZ0 661 aaKnown RBP23.9■■□□□ 1.42
CD55-202ENST00000343420 ST20-MTHFSA0A0A6YYL1 179 aa23.88■■□□□ 1.41
CD55-202ENST00000343420 TMC1Q8TDI8 760 aa23.88■■□□□ 1.41
CD55-202ENST00000343420 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
CD55-202ENST00000343420 SLC24A1O60721 1099 aa23.87■■□□□ 1.41
CD55-202ENST00000343420 LARP1Q6PKG0 1096 aaKnown RBP23.87■■□□□ 1.41
CD55-202ENST00000343420 TESK2Q96S53 571 aa23.87■■□□□ 1.41
CD55-202ENST00000343420 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
CD55-202ENST00000343420 CD163L1Q9NR16 1453 aa23.87■■□□□ 1.41
CD55-202ENST00000343420 KCNH5Q8NCM2 988 aa23.86■■□□□ 1.41
CD55-202ENST00000343420 TIMELESSQ9UNS1 1208 aa23.86■■□□□ 1.41
CD55-202ENST00000343420 AATKQ6ZMQ8 1374 aa23.86■■□□□ 1.41
CD55-202ENST00000343420 COL5A2P05997 1499 aaPredicted RBP23.86■■□□□ 1.41
CD55-202ENST00000343420 COL18A1P39060 1754 aa23.86■■□□□ 1.41
CD55-202ENST00000343420 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
CD55-202ENST00000343420 SF3B2Q13435 895 aaKnown RBP23.85■■□□□ 1.41
CD55-202ENST00000343420 SLC12A5Q9H2X9 1139 aa23.85■■□□□ 1.41
CD55-202ENST00000343420 USP35Q9P2H5 1018 aa23.85■■□□□ 1.41
CD55-202ENST00000343420 BARGINQ6ZT62 677 aa23.84■■□□□ 1.41
CD55-202ENST00000343420 HDGFL2Q7Z4V5 671 aaPredicted RBP23.84■■□□□ 1.41
CD55-202ENST00000343420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.82■■□□□ 1.4
CD55-202ENST00000343420 TCP11L2Q8N4U5 519 aa23.82■■□□□ 1.4
CD55-202ENST00000343420 USP54Q70EL1 1684 aa23.82■■□□□ 1.4
CD55-202ENST00000343420 ARHGEF25Q86VW2 580 aa23.81■■□□□ 1.4
CD55-202ENST00000343420 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
CD55-202ENST00000343420 THRAP3Q9Y2W1 955 aaKnown RBP23.81■■□□□ 1.4
CD55-202ENST00000343420 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
CD55-202ENST00000343420 USP47Q96K76 1375 aa23.8■■□□□ 1.4
CD55-202ENST00000343420 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
CD55-202ENST00000343420 CRB1P82279 1406 aa23.8■■□□□ 1.4
CD55-202ENST00000343420 RGPD5Q99666 1765 aa23.8■■□□□ 1.4
CD55-202ENST00000343420 NFAT5O94916 1531 aa23.79■■□□□ 1.4
CD55-202ENST00000343420 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
CD55-202ENST00000343420 EDC4Q6P2E9 1401 aaKnown RBP23.79■■□□□ 1.4
CD55-202ENST00000343420 SOX12O15370 315 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms