RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 ADGRB2O60241 1585 aa26.32■■□□□ 1.8
CDHR4-201ENST00000343366 PHF8Q9UPP1 1060 aa26.31■■□□□ 1.8
CDHR4-201ENST00000343366 ALS2Q96Q42 1657 aa26.31■■□□□ 1.8
CDHR4-201ENST00000343366 USP47Q96K76 1375 aa26.31■■□□□ 1.8
CDHR4-201ENST00000343366 SBNO2Q9Y2G9 1366 aa26.31■■□□□ 1.8
CDHR4-201ENST00000343366 QRICH2Q9H0J4 1663 aa26.3■■□□□ 1.8
CDHR4-201ENST00000343366 RGPD1P0DJD0 1748 aa26.3■■□□□ 1.8
CDHR4-201ENST00000343366 CRYBG1Q9Y4K1 1723 aa26.3■■□□□ 1.8
CDHR4-201ENST00000343366 SF3B2Q13435 895 aaKnown RBP26.29■■□□□ 1.8
CDHR4-201ENST00000343366 ARHGEF10O15013 1369 aa26.29■■□□□ 1.8
CDHR4-201ENST00000343366 TNS1Q9HBL0 1735 aaKnown RBP26.28■■□□□ 1.8
CDHR4-201ENST00000343366 FAM83GA6ND36 823 aa26.28■■□□□ 1.8
CDHR4-201ENST00000343366 EIF4G2P78344 907 aaKnown RBP eCLIP26.28■■□□□ 1.8
CDHR4-201ENST00000343366 THSD7AQ9UPZ6 1657 aa26.27■■□□□ 1.8
CDHR4-201ENST00000343366 COL14A1Q05707 1796 aaKnown RBP26.26■■□□□ 1.79
CDHR4-201ENST00000343366 PSME1Q06323 249 aa26.26■■□□□ 1.79
CDHR4-201ENST00000343366 SAFB2Q14151 953 aaKnown RBP eCLIP26.26■■□□□ 1.79
CDHR4-201ENST00000343366 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
CDHR4-201ENST00000343366 ANKARQ7Z5J8 1434 aa26.25■■□□□ 1.79
CDHR4-201ENST00000343366 MINK1Q8N4C8 1332 aaPredicted RBP26.22■■□□□ 1.79
CDHR4-201ENST00000343366 ST20-MTHFSA0A0A6YYL1 179 aa26.22■■□□□ 1.79
CDHR4-201ENST00000343366 EVC2Q86UK5 1308 aa26.21■■□□□ 1.79
CDHR4-201ENST00000343366 PSDA5PKW4 1024 aaPredicted RBP26.21■■□□□ 1.79
CDHR4-201ENST00000343366 WASLO00401 505 aaPredicted RBP26.21■■□□□ 1.79
CDHR4-201ENST00000343366 BAG6P46379 1132 aa26.21■■□□□ 1.79
CDHR4-201ENST00000343366 HAP1P54257 671 aaPredicted RBP26.2■■□□□ 1.78
CDHR4-201ENST00000343366 CCDC9Q9Y3X0 531 aaKnown RBP26.18■■□□□ 1.78
CDHR4-201ENST00000343366 FAM98CQ17RN3 349 aaKnown RBP26.17■■□□□ 1.78
CDHR4-201ENST00000343366 PUS7Q96PZ0 661 aaKnown RBP26.17■■□□□ 1.78
CDHR4-201ENST00000343366 HIRIP3Q9BW71 556 aaPredicted RBP26.17■■□□□ 1.78
CDHR4-201ENST00000343366 CDCA8Q53HL2 280 aa26.16■■□□□ 1.78
CDHR4-201ENST00000343366 TULP4Q9NRJ4 1543 aa26.15■■□□□ 1.78
CDHR4-201ENST00000343366 TMF1P82094 1093 aa26.15■■□□□ 1.78
CDHR4-201ENST00000343366 TESK2Q96S53 571 aa26.15■■□□□ 1.78
CDHR4-201ENST00000343366 BTG4Q9NY30 223 aa26.15■■□□□ 1.78
CDHR4-201ENST00000343366 SPATA31A5Q5VU36 1347 aa26.14■■□□□ 1.78
CDHR4-201ENST00000343366 SPATA31A7Q8IWB4 1347 aa26.14■■□□□ 1.78
CDHR4-201ENST00000343366 HSPA5P11021 654 aaKnown RBP26.14■■□□□ 1.78
CDHR4-201ENST00000343366 EN1Q05925 392 aaPredicted RBP26.14■■□□□ 1.78
CDHR4-201ENST00000343366 CDK19Q9BWU1 502 aa26.14■■□□□ 1.78
CDHR4-201ENST00000343366 ITSN1Q15811 1721 aa26.12■■□□□ 1.77
CDHR4-201ENST00000343366 PMFBP1Q8TBY8 1022 aa26.12■■□□□ 1.77
CDHR4-201ENST00000343366 PLEKHG5O94827 1062 aa26.11■■□□□ 1.77
CDHR4-201ENST00000343366 SRPK2P78362 688 aaKnown RBP26.11■■□□□ 1.77
CDHR4-201ENST00000343366 LMOD2Q6P5Q4 547 aa26.11■■□□□ 1.77
CDHR4-201ENST00000343366 PRR36Q9H6K5 1346 aa26.11■■□□□ 1.77
CDHR4-201ENST00000343366 RREB1Q92766 1687 aa26.09■■□□□ 1.77
CDHR4-201ENST00000343366 FAM182BQ5T319 152 aa26.09■■□□□ 1.77
CDHR4-201ENST00000343366 PHRF1Q9P1Y6 1649 aaKnown RBP26.07■■□□□ 1.76
CDHR4-201ENST00000343366 R3HDM1Q15032 1099 aaKnown RBP26.07■■□□□ 1.76
CDHR4-201ENST00000343366 CCDC61Q9Y6R9 512 aa26.07■■□□□ 1.76
CDHR4-201ENST00000343366 A0A0G2JS52 829 aa26.06■■□□□ 1.76
CDHR4-201ENST00000343366 MYT1Q01538 1121 aa26.06■■□□□ 1.76
CDHR4-201ENST00000343366 NUDT16Q96DE0 195 aaKnown RBP26.06■■□□□ 1.76
CDHR4-201ENST00000343366 ATP7BP35670 1465 aa26.05■■□□□ 1.76
CDHR4-201ENST00000343366 CAMKK2Q96RR4 588 aa26.05■■□□□ 1.76
CDHR4-201ENST00000343366 NUP188Q5SRE5 1749 aa26.04■■□□□ 1.76
CDHR4-201ENST00000343366 EZH2Q15910 746 aaKnown RBP26.03■■□□□ 1.76
CDHR4-201ENST00000343366 CABP2Q9NPB3 220 aa26.03■■□□□ 1.76
CDHR4-201ENST00000343366 NINLQ9Y2I6 1382 aa26.03■■□□□ 1.76
CDHR4-201ENST00000343366 SPATA31A1Q5TZJ5 1347 aa26.02■■□□□ 1.76
CDHR4-201ENST00000343366 TOPAZ1Q8N9V7 1692 aa26.02■■□□□ 1.76
CDHR4-201ENST00000343366 PARD3Q8TEW0 1356 aa26■■□□□ 1.75
CDHR4-201ENST00000343366 PLEKHG3A1L390 1219 aa25.98■■□□□ 1.75
CDHR4-201ENST00000343366 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
CDHR4-201ENST00000343366 KIAA0232Q92628 1395 aa25.96■■□□□ 1.75
CDHR4-201ENST00000343366 FAM196AQ6ZSG2 479 aa25.95■■□□□ 1.74
CDHR4-201ENST00000343366 PRDM11Q9NQV5 511 aa25.95■■□□□ 1.74
CDHR4-201ENST00000343366 LMO7Q8WWI1 1683 aa25.95■■□□□ 1.74
CDHR4-201ENST00000343366 TRIM37O94972 964 aa25.94■■□□□ 1.74
CDHR4-201ENST00000343366 NGDNQ8NEJ9 315 aaKnown RBP25.93■■□□□ 1.74
CDHR4-201ENST00000343366 ZNF692Q9BU19 519 aaPredicted RBP25.93■■□□□ 1.74
CDHR4-201ENST00000343366 NRKQ7Z2Y5 1582 aa25.93■■□□□ 1.74
CDHR4-201ENST00000343366 POLR3AO14802 1390 aaPredicted RBP25.93■■□□□ 1.74
CDHR4-201ENST00000343366 BRD4O60885 1362 aaPredicted RBP25.93■■□□□ 1.74
CDHR4-201ENST00000343366 CABP1Q9NZU7 370 aa25.92■■□□□ 1.74
CDHR4-201ENST00000343366 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
CDHR4-201ENST00000343366 BARGINQ6ZT62 677 aa25.9■■□□□ 1.74
CDHR4-201ENST00000343366 TERF2IPQ9NYB0 399 aa25.9■■□□□ 1.74
CDHR4-201ENST00000343366 SSH2Q76I76 1423 aa25.89■■□□□ 1.74
CDHR4-201ENST00000343366 CHRNA2Q15822 529 aa25.89■■□□□ 1.74
CDHR4-201ENST00000343366 ACEP12821 1306 aa25.88■■□□□ 1.73
CDHR4-201ENST00000343366 PARP4Q9UKK3 1724 aaKnown RBP25.88■■□□□ 1.73
CDHR4-201ENST00000343366 HDGFL2Q7Z4V5 671 aaPredicted RBP25.88■■□□□ 1.73
CDHR4-201ENST00000343366 TMC1Q8TDI8 760 aa25.88■■□□□ 1.73
CDHR4-201ENST00000343366 PEAK1Q9H792 1746 aa25.87■■□□□ 1.73
CDHR4-201ENST00000343366 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
CDHR4-201ENST00000343366 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
CDHR4-201ENST00000343366 APBA3O96018 575 aa25.86■■□□□ 1.73
CDHR4-201ENST00000343366 AKAP12Q02952 1782 aa25.86■■□□□ 1.73
CDHR4-201ENST00000343366 PAK3O75914 559 aaPredicted RBP25.85■■□□□ 1.73
CDHR4-201ENST00000343366 CPSF1Q10570 1443 aaKnown RBP25.85■■□□□ 1.73
CDHR4-201ENST00000343366 KIF7Q2M1P5 1343 aa25.84■■□□□ 1.73
CDHR4-201ENST00000343366 CPDO75976 1380 aa25.83■■□□□ 1.73
CDHR4-201ENST00000343366 ANKRD36BQ8N2N9 1353 aa25.83■■□□□ 1.73
CDHR4-201ENST00000343366 SLC12A5Q9H2X9 1139 aa25.83■■□□□ 1.73
CDHR4-201ENST00000343366 STRN4Q9NRL3 753 aa25.83■■□□□ 1.73
CDHR4-201ENST00000343366 SBF2Q86WG5 1849 aa25.83■■□□□ 1.73
CDHR4-201ENST00000343366 MYOM1P52179 1685 aa25.83■■□□□ 1.73
CDHR4-201ENST00000343366 POLR3GLQ9BT43 218 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms