RNA–Protein interactions for RNA: ENST00000343304.10

LRRC41-201, Transcript of leucine rich repeat containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC41, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-201ENST00000343304 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
LRRC41-201ENST00000343304 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
LRRC41-201ENST00000343304 ABCC11Q96J66 1382 aa18.99■□□□□ 0.63
LRRC41-201ENST00000343304 VIRMAQ69YN4 1812 aaKnown RBP18.98■□□□□ 0.63
LRRC41-201ENST00000343304 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
LRRC41-201ENST00000343304 FRAT1Q92837 279 aaPredicted RBP18.98■□□□□ 0.63
LRRC41-201ENST00000343304 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
LRRC41-201ENST00000343304 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
LRRC41-201ENST00000343304 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
LRRC41-201ENST00000343304 SIRT1Q96EB6 747 aa18.96■□□□□ 0.63
LRRC41-201ENST00000343304 PLEKHG1Q9ULL1 1385 aa18.96■□□□□ 0.63
LRRC41-201ENST00000343304 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
LRRC41-201ENST00000343304 SETD1BQ9UPS6 1966 aaKnown RBP18.95■□□□□ 0.62
LRRC41-201ENST00000343304 CEP170BQ9Y4F5 1589 aaPredicted RBP18.95■□□□□ 0.62
LRRC41-201ENST00000343304 ATAD2Q6PL18 1390 aa18.95■□□□□ 0.62
LRRC41-201ENST00000343304 MED14O60244 1454 aa18.95■□□□□ 0.62
LRRC41-201ENST00000343304 TECPR2O15040 1411 aa18.94■□□□□ 0.62
LRRC41-201ENST00000343304 A0A1W2PP64 1363 aa18.94■□□□□ 0.62
LRRC41-201ENST00000343304 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
LRRC41-201ENST00000343304 NFKBIBQ15653 356 aa18.93■□□□□ 0.62
LRRC41-201ENST00000343304 YTHDC2Q9H6S0 1430 aaKnown RBP18.92■□□□□ 0.62
LRRC41-201ENST00000343304 RLBP1P12271 317 aa18.92■□□□□ 0.62
LRRC41-201ENST00000343304 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
LRRC41-201ENST00000343304 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
LRRC41-201ENST00000343304 PTPRMP28827 1452 aa18.92■□□□□ 0.62
LRRC41-201ENST00000343304 PLEKHF1Q96S99 279 aa18.91■□□□□ 0.62
LRRC41-201ENST00000343304 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
LRRC41-201ENST00000343304 USP19O94966 1318 aa18.91■□□□□ 0.62
LRRC41-201ENST00000343304 SRPK2P78362 688 aaKnown RBP18.91■□□□□ 0.62
LRRC41-201ENST00000343304 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
LRRC41-201ENST00000343304 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
LRRC41-201ENST00000343304 CPS1P31327 1500 aa18.9■□□□□ 0.62
LRRC41-201ENST00000343304 IL16Q14005 1332 aa18.9■□□□□ 0.62
LRRC41-201ENST00000343304 FAM135BQ49AJ0 1406 aa18.9■□□□□ 0.62
LRRC41-201ENST00000343304 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
LRRC41-201ENST00000343304 ANKRD26Q9UPS8 1709 aa18.9■□□□□ 0.62
LRRC41-201ENST00000343304 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
LRRC41-201ENST00000343304 STK26Q9P289 416 aa18.88■□□□□ 0.61
LRRC41-201ENST00000343304 TMPOP42166 694 aaKnown RBP18.88■□□□□ 0.61
LRRC41-201ENST00000343304 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.617e-7■□□□□ 9.1
LRRC41-201ENST00000343304 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
LRRC41-201ENST00000343304 FYB1O15117 783 aa18.87■□□□□ 0.61
LRRC41-201ENST00000343304 TNNQ9UQP3 1299 aa18.87■□□□□ 0.61
LRRC41-201ENST00000343304 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
LRRC41-201ENST00000343304 GGNBP2Q9H3C7 697 aa18.87■□□□□ 0.61
LRRC41-201ENST00000343304 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
LRRC41-201ENST00000343304 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
LRRC41-201ENST00000343304 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
LRRC41-201ENST00000343304 POGKQ9P215 609 aa18.86■□□□□ 0.61
LRRC41-201ENST00000343304 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
LRRC41-201ENST00000343304 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
LRRC41-201ENST00000343304 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
LRRC41-201ENST00000343304 EID1Q9Y6B2 187 aa18.85■□□□□ 0.61
LRRC41-201ENST00000343304 ADAMTS13Q76LX8 1427 aa18.85■□□□□ 0.61
LRRC41-201ENST00000343304 U2SURPO15042 1029 aaKnown RBP18.85■□□□□ 0.61
LRRC41-201ENST00000343304 GSE1Q14687 1217 aa18.85■□□□□ 0.61
LRRC41-201ENST00000343304 HDGFL2Q7Z4V5 671 aaPredicted RBP18.85■□□□□ 0.61
LRRC41-201ENST00000343304 PNPLA6Q8IY17 1366 aa18.85■□□□□ 0.61
LRRC41-201ENST00000343304 BECN1Q14457 450 aa18.84■□□□□ 0.61
LRRC41-201ENST00000343304 SEC24BO95487 1268 aa18.84■□□□□ 0.61
LRRC41-201ENST00000343304 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
LRRC41-201ENST00000343304 MINK1Q8N4C8 1332 aaPredicted RBP18.83■□□□□ 0.61
LRRC41-201ENST00000343304 EXOSC9Q06265 439 aaKnown RBP18.83■□□□□ 0.6
LRRC41-201ENST00000343304 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
LRRC41-201ENST00000343304 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
LRRC41-201ENST00000343304 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
LRRC41-201ENST00000343304 SMC4Q9NTJ3 1288 aa18.81■□□□□ 0.6
LRRC41-201ENST00000343304 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
LRRC41-201ENST00000343304 CDK19Q9BWU1 502 aa18.8■□□□□ 0.6
LRRC41-201ENST00000343304 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
LRRC41-201ENST00000343304 HDAC1Q13547 482 aaPredicted RBP18.8■□□□□ 0.6
LRRC41-201ENST00000343304 TBX22Q9Y458 520 aa18.8■□□□□ 0.6
LRRC41-201ENST00000343304 CDC42BPGQ6DT37 1551 aa18.79■□□□□ 0.6
LRRC41-201ENST00000343304 FCHSD2O94868 740 aa18.79■□□□□ 0.6
LRRC41-201ENST00000343304 RIPK4P57078 832 aa18.79■□□□□ 0.6
LRRC41-201ENST00000343304 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
LRRC41-201ENST00000343304 SSH1Q8WYL5 1049 aa18.79■□□□□ 0.6
LRRC41-201ENST00000343304 PTCH1Q13635 1447 aa18.79■□□□□ 0.6
LRRC41-201ENST00000343304 TRIM27P14373 513 aa18.78■□□□□ 0.6
LRRC41-201ENST00000343304 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
LRRC41-201ENST00000343304 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.6
LRRC41-201ENST00000343304 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.59
LRRC41-201ENST00000343304 CABP1Q9NZU7 370 aa18.77■□□□□ 0.59
LRRC41-201ENST00000343304 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
LRRC41-201ENST00000343304 ALDH1L2Q3SY69 923 aa18.76■□□□□ 0.59
LRRC41-201ENST00000343304 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
LRRC41-201ENST00000343304 KIF16BQ96L93 1317 aa18.75■□□□□ 0.59
LRRC41-201ENST00000343304 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
LRRC41-201ENST00000343304 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
LRRC41-201ENST00000343304 METP08581 1390 aa18.75■□□□□ 0.59
LRRC41-201ENST00000343304 ATP7BP35670 1465 aa18.75■□□□□ 0.59
LRRC41-201ENST00000343304 LTKP29376 864 aa18.74■□□□□ 0.59
LRRC41-201ENST00000343304 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
LRRC41-201ENST00000343304 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
LRRC41-201ENST00000343304 ITPRIPQ8IWB1 547 aa18.73■□□□□ 0.59
LRRC41-201ENST00000343304 SMC5Q8IY18 1101 aa18.73■□□□□ 0.59
LRRC41-201ENST00000343304 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
LRRC41-201ENST00000343304 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
LRRC41-201ENST00000343304 PPIP5K1Q6PFW1 1433 aa18.72■□□□□ 0.59
LRRC41-201ENST00000343304 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms