RNA–Protein interactions for RNA: ENST00000343150.9

CTSL-203, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 2,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-203ENST00000343150 TRAK1Q9UPV9 953 aa21.32■■□□□ 1
CTSL-203ENST00000343150 ANKRD36BQ8N2N9 1353 aa21.31■■□□□ 1
CTSL-203ENST00000343150 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
CTSL-203ENST00000343150 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
CTSL-203ENST00000343150 L1TD1Q5T7N2 865 aaKnown RBP21.3■■□□□ 1
CTSL-203ENST00000343150 ZKSCAN2Q63HK3 967 aa21.3■■□□□ 1
CTSL-203ENST00000343150 A2ML1A8K2U0 1454 aa21.29■■□□□ 1
CTSL-203ENST00000343150 SLKQ9H2G2 1235 aaPredicted RBP21.29■■□□□ 1
CTSL-203ENST00000343150 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
CTSL-203ENST00000343150 POGKQ9P215 609 aa21.29■■□□□ 1
CTSL-203ENST00000343150 TNNQ9UQP3 1299 aa21.29■■□□□ 1
CTSL-203ENST00000343150 ARHGEF28Q8N1W1 1705 aaKnown RBP21.28■■□□□ 1
CTSL-203ENST00000343150 EVC2Q86UK5 1308 aa21.27■■□□□ 1
CTSL-203ENST00000343150 TULP4Q9NRJ4 1543 aa21.27■■□□□ 1
CTSL-203ENST00000343150 DZIP1LQ8IYY4 767 aaKnown RBP21.27■■□□□ 1
CTSL-203ENST00000343150 BCL2L13Q9BXK5 485 aa21.27■■□□□ 1
CTSL-203ENST00000343150 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
CTSL-203ENST00000343150 HDAC1Q13547 482 aaPredicted RBP21.24■□□□□ 0.99
CTSL-203ENST00000343150 ZFYVE9O95405 1425 aa21.24■□□□□ 0.99
CTSL-203ENST00000343150 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
CTSL-203ENST00000343150 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
CTSL-203ENST00000343150 UBR1Q8IWV7 1749 aa21.23■□□□□ 0.99
CTSL-203ENST00000343150 STAG3Q9UJ98 1225 aa21.23■□□□□ 0.99
CTSL-203ENST00000343150 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
CTSL-203ENST00000343150 NUTM2DQ5VT03 806 aaPredicted RBP21.22■□□□□ 0.99
CTSL-203ENST00000343150 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
CTSL-203ENST00000343150 IL16Q14005 1332 aa21.21■□□□□ 0.99
CTSL-203ENST00000343150 VGFO15240 615 aaPredicted RBP21.21■□□□□ 0.99
CTSL-203ENST00000343150 DDX19BQ9UMR2 479 aa21.21■□□□□ 0.99
CTSL-203ENST00000343150 TMEM132EQ6IEE7 984 aa21.2■□□□□ 0.98
CTSL-203ENST00000343150 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
CTSL-203ENST00000343150 C22orf23Q9BZE7 217 aa21.19■□□□□ 0.98
CTSL-203ENST00000343150 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.19■□□□□ 0.98
CTSL-203ENST00000343150 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
CTSL-203ENST00000343150 RSPH6AQ9H0K4 717 aa21.19■□□□□ 0.98
CTSL-203ENST00000343150 SMC4Q9NTJ3 1288 aa21.19■□□□□ 0.98
CTSL-203ENST00000343150 RIMS2Q9UQ26 1411 aa21.18■□□□□ 0.98
CTSL-203ENST00000343150 PLEKHF1Q96S99 279 aa21.18■□□□□ 0.98
CTSL-203ENST00000343150 MED14O60244 1454 aa21.18■□□□□ 0.98
CTSL-203ENST00000343150 PRKCSHP14314 528 aaPredicted RBP21.17■□□□□ 0.98
CTSL-203ENST00000343150 CHMP5Q9NZZ3 219 aa21.17■□□□□ 0.98
CTSL-203ENST00000343150 TRIM27P14373 513 aa21.16■□□□□ 0.98
CTSL-203ENST00000343150 MCM4P33991 863 aa21.16■□□□□ 0.98
CTSL-203ENST00000343150 SMC5Q8IY18 1101 aa21.16■□□□□ 0.98
CTSL-203ENST00000343150 TMPOP42166 694 aaKnown RBP21.16■□□□□ 0.98
CTSL-203ENST00000343150 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
CTSL-203ENST00000343150 EXOSC9Q06265 439 aaKnown RBP21.15■□□□□ 0.98
CTSL-203ENST00000343150 TSR2Q969E8 191 aaKnown RBP21.14■□□□□ 0.98
CTSL-203ENST00000343150 PTPRMP28827 1452 aa21.14■□□□□ 0.97
CTSL-203ENST00000343150 TMEM2Q9UHN6 1383 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 FSD2A1L4K1 749 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 SSH1Q8WYL5 1049 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 A0A1W2PP64 1363 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 ITPRIPQ8IWB1 547 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 KIF16BQ96L93 1317 aa21.13■□□□□ 0.97
CTSL-203ENST00000343150 MFAP1P55081 439 aaKnown RBP21.12■□□□□ 0.97
CTSL-203ENST00000343150 GOLGA6L3A6NEY3 463 aa21.12■□□□□ 0.97
CTSL-203ENST00000343150 NCOA3Q9Y6Q9 1424 aa21.11■□□□□ 0.97
CTSL-203ENST00000343150 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
CTSL-203ENST00000343150 IPO8O15397 1037 aaKnown RBP21.1■□□□□ 0.97
CTSL-203ENST00000343150 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
CTSL-203ENST00000343150 ATAD2Q6PL18 1390 aa21.1■□□□□ 0.97
CTSL-203ENST00000343150 HSCBQ8IWL3 235 aa21.1■□□□□ 0.97
CTSL-203ENST00000343150 CABP2Q9NPB3 220 aa21.1■□□□□ 0.97
CTSL-203ENST00000343150 ZBTB40Q9NUA8 1239 aa21.1■□□□□ 0.97
CTSL-203ENST00000343150 ARHGAP23Q9P227 1491 aa21.09■□□□□ 0.97
CTSL-203ENST00000343150 SLIT1O75093 1534 aa21.09■□□□□ 0.97
CTSL-203ENST00000343150 ALDH1L2Q3SY69 923 aa21.09■□□□□ 0.97
CTSL-203ENST00000343150 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.09■□□□□ 0.97
CTSL-203ENST00000343150 NOB1Q9ULX3 412 aaKnown RBP21.09■□□□□ 0.97
CTSL-203ENST00000343150 CDC42BPGQ6DT37 1551 aa21.08■□□□□ 0.97
CTSL-203ENST00000343150 U2SURPO15042 1029 aaKnown RBP21.08■□□□□ 0.97
CTSL-203ENST00000343150 RBM25P49756 843 aaKnown RBP21.08■□□□□ 0.97
CTSL-203ENST00000343150 ALKQ9UM73 1620 aa21.08■□□□□ 0.97
CTSL-203ENST00000343150 NRXN3Q9Y4C0 1643 aa21.08■□□□□ 0.97
CTSL-203ENST00000343150 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.97
CTSL-203ENST00000343150 DDX11L8A8MPP1 907 aa21.07■□□□□ 0.96
CTSL-203ENST00000343150 TMEM57Q8N5G2 664 aa21.07■□□□□ 0.96
CTSL-203ENST00000343150 SNX21Q969T3 373 aa21.07■□□□□ 0.96
CTSL-203ENST00000343150 NUCB1Q02818 461 aa21.06■□□□□ 0.96
CTSL-203ENST00000343150 ZNF428Q96B54 188 aa21.06■□□□□ 0.96
CTSL-203ENST00000343150 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
CTSL-203ENST00000343150 SETD1AO15047 1707 aaKnown RBP21.06■□□□□ 0.96
CTSL-203ENST00000343150 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
CTSL-203ENST00000343150 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
CTSL-203ENST00000343150 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
CTSL-203ENST00000343150 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
CTSL-203ENST00000343150 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
CTSL-203ENST00000343150 LTKP29376 864 aa21.05■□□□□ 0.96
CTSL-203ENST00000343150 BRPF1P55201 1214 aaPredicted RBP21.05■□□□□ 0.96
CTSL-203ENST00000343150 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
CTSL-203ENST00000343150 TRAK2O60296 914 aa21.04■□□□□ 0.96
CTSL-203ENST00000343150 HDGFP51858 240 aaKnown RBP21.04■□□□□ 0.96
CTSL-203ENST00000343150 DDIT3P35638 169 aa21.04■□□□□ 0.96
CTSL-203ENST00000343150 RIPK4P57078 832 aa21.04■□□□□ 0.96
CTSL-203ENST00000343150 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
CTSL-203ENST00000343150 SPRYD3Q8NCJ5 442 aa21.04■□□□□ 0.96
CTSL-203ENST00000343150 PPIP5K1Q6PFW1 1433 aa21.04■□□□□ 0.96
CTSL-203ENST00000343150 CD163L1Q9NR16 1453 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms