RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 ZNF692Q9BU19 519 aaPredicted RBP30.51■■■□□ 2.47
RBM38-201ENST00000342690 A0A1W2PP64 1363 aa30.51■■■□□ 2.47
RBM38-201ENST00000342690 ARHGEF10O15013 1369 aa30.51■■■□□ 2.47
RBM38-201ENST00000342690 BRD4O60885 1362 aaPredicted RBP30.51■■■□□ 2.47
RBM38-201ENST00000342690 LRP6O75581 1613 aa30.51■■■□□ 2.47
RBM38-201ENST00000342690 MED1Q15648 1581 aaPredicted RBP30.5■■■□□ 2.47
RBM38-201ENST00000342690 LMOD2Q6P5Q4 547 aa30.5■■■□□ 2.47
RBM38-201ENST00000342690 KTN1Q86UP2 1357 aaKnown RBP30.5■■■□□ 2.47
RBM38-201ENST00000342690 POLR3GLQ9BT43 218 aa30.49■■■□□ 2.47
RBM38-201ENST00000342690 HDGFL2Q7Z4V5 671 aaPredicted RBP30.48■■■□□ 2.47
RBM38-201ENST00000342690 ANKRD36BQ8N2N9 1353 aa30.47■■■□□ 2.47
RBM38-201ENST00000342690 TERF2IPQ9NYB0 399 aa30.47■■■□□ 2.47
RBM38-201ENST00000342690 ABCA3Q99758 1704 aa30.46■■■□□ 2.47
RBM38-201ENST00000342690 NUTM2BA6NNL0 878 aaPredicted RBP30.45■■■□□ 2.47
RBM38-201ENST00000342690 NUTM2EB1AL46 878 aaPredicted RBP30.45■■■□□ 2.47
RBM38-201ENST00000342690 NUTM2AQ8IVF1 878 aaPredicted RBP30.45■■■□□ 2.47
RBM38-201ENST00000342690 PIK3C2AO00443 1686 aa30.44■■■□□ 2.46
RBM38-201ENST00000342690 CRYBG1Q9Y4K1 1723 aa30.44■■■□□ 2.46
RBM38-201ENST00000342690 KIF7Q2M1P5 1343 aa30.44■■■□□ 2.46
RBM38-201ENST00000342690 TTC21BQ7Z4L5 1316 aa30.44■■■□□ 2.46
RBM38-201ENST00000342690 EDC4Q6P2E9 1401 aaKnown RBP30.42■■■□□ 2.46
RBM38-201ENST00000342690 PLEKHG5O94827 1062 aa30.4■■■□□ 2.46
RBM38-201ENST00000342690 NUTM2GQ5VZR2 741 aa30.4■■■□□ 2.46
RBM38-201ENST00000342690 ABTB2Q8N961 1025 aa30.4■■■□□ 2.46
RBM38-201ENST00000342690 CABLES1Q8TDN4 633 aa30.39■■■□□ 2.46
RBM38-201ENST00000342690 TTC21AQ8NDW8 1320 aa30.39■■■□□ 2.46
RBM38-201ENST00000342690 PHRF1Q9P1Y6 1649 aaKnown RBP30.39■■■□□ 2.46
RBM38-201ENST00000342690 CCDC7Q96M83 1385 aa30.39■■■□□ 2.45
RBM38-201ENST00000342690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.36■■■□□ 2.45
RBM38-201ENST00000342690 MARF1Q9Y4F3 1742 aaKnown RBP30.36■■■□□ 2.45
RBM38-201ENST00000342690 WASHC2AQ641Q2 1341 aa30.34■■■□□ 2.45
RBM38-201ENST00000342690 MEX3CQ5U5Q3 659 aaKnown RBP30.34■■■□□ 2.45
RBM38-201ENST00000342690 USP19O94966 1318 aa30.33■■■□□ 2.45
RBM38-201ENST00000342690 ADAMTS2O95450 1211 aa30.33■■■□□ 2.45
RBM38-201ENST00000342690 USP54Q70EL1 1684 aa30.33■■■□□ 2.45
RBM38-201ENST00000342690 HAP1P54257 671 aaPredicted RBP30.32■■■□□ 2.44
RBM38-201ENST00000342690 NLRP13Q86W25 1043 aa30.32■■■□□ 2.44
RBM38-201ENST00000342690 NME9Q86XW9 330 aa30.32■■■□□ 2.44
RBM38-201ENST00000342690 NLRP6P59044 892 aa30.31■■■□□ 2.44
RBM38-201ENST00000342690 CARD14Q9BXL6 1004 aa30.31■■■□□ 2.44
RBM38-201ENST00000342690 NSD3Q9BZ95 1437 aa30.3■■■□□ 2.44
RBM38-201ENST00000342690 SLIT3O75094 1523 aa30.3■■■□□ 2.44
RBM38-201ENST00000342690 ZRANB1Q9UGI0 708 aa30.29■■■□□ 2.44
RBM38-201ENST00000342690 USP31Q70CQ4 1352 aa30.28■■■□□ 2.44
RBM38-201ENST00000342690 ZNF316A6NFI3 1004 aaPredicted RBP30.28■■■□□ 2.44
RBM38-201ENST00000342690 PANK3Q9H999 370 aa30.27■■■□□ 2.44
RBM38-201ENST00000342690 KIF20BQ96Q89 1820 aa30.26■■■□□ 2.44
RBM38-201ENST00000342690 C8orf37Q96NL8 207 aa30.26■■■□□ 2.43
RBM38-201ENST00000342690 OVOS2A0A0J9YW53 1432 aa30.25■■■□□ 2.43
RBM38-201ENST00000342690 OVOS2Q6IE36 1432 aa30.25■■■□□ 2.43
RBM38-201ENST00000342690 PHF23Q9BUL5 403 aaPredicted RBP30.23■■■□□ 2.43
RBM38-201ENST00000342690 GCP02774 474 aa30.21■■■□□ 2.43
RBM38-201ENST00000342690 FYB1O15117 783 aa30.2■■■□□ 2.43
RBM38-201ENST00000342690 PLCH1Q4KWH8 1693 aa30.2■■■□□ 2.42
RBM38-201ENST00000342690 KIAA0232Q92628 1395 aa30.19■■■□□ 2.42
RBM38-201ENST00000342690 NFAT5O94916 1531 aa30.19■■■□□ 2.42
RBM38-201ENST00000342690 NGLY1Q96IV0 654 aa30.19■■■□□ 2.42
RBM38-201ENST00000342690 AFF2P51816 1311 aa30.19■■■□□ 2.42
RBM38-201ENST00000342690 ZC3H6P61129 1189 aaKnown RBP30.18■■■□□ 2.42
RBM38-201ENST00000342690 GGNBP2Q9H3C7 697 aa30.18■■■□□ 2.42
RBM38-201ENST00000342690 COL14A1Q05707 1796 aaKnown RBP30.18■■■□□ 2.42
RBM38-201ENST00000342690 RGS17Q9UGC6 210 aaPredicted RBP30.17■■■□□ 2.42
RBM38-201ENST00000342690 FAM83GA6ND36 823 aa30.16■■■□□ 2.42
RBM38-201ENST00000342690 COG3Q96JB2 828 aa30.16■■■□□ 2.42
RBM38-201ENST00000342690 SLIT2O94813 1529 aa30.16■■■□□ 2.42
RBM38-201ENST00000342690 CPDO75976 1380 aa30.15■■■□□ 2.42
RBM38-201ENST00000342690 SOX12O15370 315 aa30.15■■■□□ 2.42
RBM38-201ENST00000342690 KCNH5Q8NCM2 988 aa30.15■■■□□ 2.42
RBM38-201ENST00000342690 CGNL1Q0VF96 1302 aa30.15■■■□□ 2.42
RBM38-201ENST00000342690 FNBP4Q8N3X1 1017 aaPredicted RBP30.14■■■□□ 2.42
RBM38-201ENST00000342690 PRDM11Q9NQV5 511 aa30.14■■■□□ 2.42
RBM38-201ENST00000342690 NWD2Q9ULI1 1742 aa30.13■■■□□ 2.41
RBM38-201ENST00000342690 CHRNA2Q15822 529 aa30.12■■■□□ 2.41
RBM38-201ENST00000342690 ANKRD26Q9UPS8 1709 aa30.12■■■□□ 2.41
RBM38-201ENST00000342690 BCL9LQ86UU0 1499 aa30.11■■■□□ 2.41
RBM38-201ENST00000342690 LMO7Q8WWI1 1683 aa30.11■■■□□ 2.41
RBM38-201ENST00000342690 NRAPQ86VF7 1730 aa30.1■■■□□ 2.41
RBM38-201ENST00000342690 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.1■■■□□ 2.41
RBM38-201ENST00000342690 USP21Q9UK80 565 aa30.1■■■□□ 2.41
RBM38-201ENST00000342690 ZNF772Q68DY9 489 aaPredicted RBP30.09■■■□□ 2.41
RBM38-201ENST00000342690 KNSTRNQ9Y448 316 aa30.09■■■□□ 2.41
RBM38-201ENST00000342690 PER1O15534 1290 aaPredicted RBP30.08■■■□□ 2.41
RBM38-201ENST00000342690 LTN1O94822 1766 aa30.08■■■□□ 2.41
RBM38-201ENST00000342690 ZBTB7CA1YPR0 619 aa30.07■■■□□ 2.4
RBM38-201ENST00000342690 ARHGEF25Q86VW2 580 aa30.07■■■□□ 2.4
RBM38-201ENST00000342690 COL18A1P39060 1754 aa30.07■■■□□ 2.4
RBM38-201ENST00000342690 NSD2O96028 1365 aa30.06■■■□□ 2.4
RBM38-201ENST00000342690 DDX10Q13206 875 aaKnown RBP30.06■■■□□ 2.4
RBM38-201ENST00000342690 BTG4Q9NY30 223 aa30.05■■■□□ 2.4
RBM38-201ENST00000342690 CAMTA1Q9Y6Y1 1673 aa30.04■■■□□ 2.4
RBM38-201ENST00000342690 AMER1Q5JTC6 1135 aaPredicted RBP30.04■■■□□ 2.4
RBM38-201ENST00000342690 POTEAQ6S8J7 498 aa30.04■■■□□ 2.4
RBM38-201ENST00000342690 UNC5CLQ8IV45 518 aa30.04■■■□□ 2.4
RBM38-201ENST00000342690 AATKQ6ZMQ8 1374 aa30.03■■■□□ 2.4
RBM38-201ENST00000342690 FBLN1P23142 703 aa30.03■■■□□ 2.4
RBM38-201ENST00000342690 ATRNO75882 1429 aa30.03■■■□□ 2.4
RBM38-201ENST00000342690 ABCC6O95255 1503 aa30.01■■■□□ 2.4
RBM38-201ENST00000342690 RGPD5Q99666 1765 aa30■■■□□ 2.39
RBM38-201ENST00000342690 QTRT2Q9H974 415 aaKnown RBP29.99■■■□□ 2.39
RBM38-201ENST00000342690 TRPC5Q9UL62 973 aaPredicted RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms