RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 MAST1Q9Y2H9 1570 aa15.63■□□□□ 0.09
LMX1A-202ENST00000342310 MPNDQ8N594 471 aa15.63■□□□□ 0.09
LMX1A-202ENST00000342310 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
LMX1A-202ENST00000342310 RILPL2Q969X0 211 aa15.63■□□□□ 0.09
LMX1A-202ENST00000342310 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
LMX1A-202ENST00000342310 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
LMX1A-202ENST00000342310 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
LMX1A-202ENST00000342310 CHMP5Q9NZZ3 219 aa15.62■□□□□ 0.09
LMX1A-202ENST00000342310 PTPRTO14522 1441 aa15.62■□□□□ 0.09
LMX1A-202ENST00000342310 MCM4P33991 863 aa15.62■□□□□ 0.09
LMX1A-202ENST00000342310 USP19O94966 1318 aa15.62■□□□□ 0.09
LMX1A-202ENST00000342310 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
LMX1A-202ENST00000342310 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
LMX1A-202ENST00000342310 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
LMX1A-202ENST00000342310 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
LMX1A-202ENST00000342310 EIF2S2P20042 333 aaKnown RBP15.61■□□□□ 0.09
LMX1A-202ENST00000342310 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
LMX1A-202ENST00000342310 ANP32BQ92688 251 aaKnown RBP15.61■□□□□ 0.09
LMX1A-202ENST00000342310 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
LMX1A-202ENST00000342310 AMPHP49418 695 aa15.6■□□□□ 0.09
LMX1A-202ENST00000342310 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
LMX1A-202ENST00000342310 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
LMX1A-202ENST00000342310 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
LMX1A-202ENST00000342310 DDX49Q9Y6V7 483 aaKnown RBP15.6■□□□□ 0.09
LMX1A-202ENST00000342310 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
LMX1A-202ENST00000342310 GOLGA6L22H0YM25 854 aa15.59■□□□□ 0.09
LMX1A-202ENST00000342310 L1TD1Q5T7N2 865 aaKnown RBP15.59■□□□□ 0.09
LMX1A-202ENST00000342310 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
LMX1A-202ENST00000342310 OTUD7AQ8TE49 926 aaPredicted RBP15.59■□□□□ 0.09
LMX1A-202ENST00000342310 PREX2Q70Z35 1606 aa15.58■□□□□ 0.08
LMX1A-202ENST00000342310 MAP4K4O95819 1239 aaPredicted RBP15.57■□□□□ 0.08
LMX1A-202ENST00000342310 INSRP06213 1382 aa15.57■□□□□ 0.08
LMX1A-202ENST00000342310 FOXO3O43524 673 aa15.57■□□□□ 0.08
LMX1A-202ENST00000342310 GNAI1P63096 354 aa15.57■□□□□ 0.08
LMX1A-202ENST00000342310 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
LMX1A-202ENST00000342310 EXOC6BQ9Y2D4 811 aa15.57■□□□□ 0.08
LMX1A-202ENST00000342310 MCTP1Q6DN14 999 aa15.57■□□□□ 0.08
LMX1A-202ENST00000342310 NUDT16Q96DE0 195 aaKnown RBP15.56■□□□□ 0.08
LMX1A-202ENST00000342310 NPATQ14207 1427 aa15.56■□□□□ 0.08
LMX1A-202ENST00000342310 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
LMX1A-202ENST00000342310 CCDC9Q9Y3X0 531 aaKnown RBP15.56■□□□□ 0.08
LMX1A-202ENST00000342310 FKBP5Q13451 457 aaPredicted RBP15.56■□□□□ 0.08
LMX1A-202ENST00000342310 NFE2L2Q16236 605 aa15.56■□□□□ 0.08
LMX1A-202ENST00000342310 LARP6Q9BRS8 491 aaKnown RBP15.56■□□□□ 0.08
LMX1A-202ENST00000342310 FCHSD2O94868 740 aa15.55■□□□□ 0.08
LMX1A-202ENST00000342310 OS9Q13438 667 aaPredicted RBP15.55■□□□□ 0.08
LMX1A-202ENST00000342310 GBP4Q96PP9 640 aa15.55■□□□□ 0.08
LMX1A-202ENST00000342310 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
LMX1A-202ENST00000342310 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
LMX1A-202ENST00000342310 TBC1D9Q6ZT07 1266 aa15.55■□□□□ 0.08
LMX1A-202ENST00000342310 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
LMX1A-202ENST00000342310 EIF2AK4Q9P2K8 1649 aaKnown RBP15.54■□□□□ 0.08
LMX1A-202ENST00000342310 SSFA2P28290 1259 aa15.54■□□□□ 0.08
LMX1A-202ENST00000342310 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
LMX1A-202ENST00000342310 USHBP1Q8N6Y0 703 aa15.54■□□□□ 0.08
LMX1A-202ENST00000342310 ANKRD36BQ8N2N9 1353 aa15.54■□□□□ 0.08
LMX1A-202ENST00000342310 ATP7AQ04656 1500 aa15.53■□□□□ 0.08
LMX1A-202ENST00000342310 CASC1Q6TDU7 716 aa15.53■□□□□ 0.08
LMX1A-202ENST00000342310 XRCC6P12956 609 aaKnown RBP eCLIP15.53■□□□□ 0.08
LMX1A-202ENST00000342310 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
LMX1A-202ENST00000342310 CHD1O14646 1710 aa15.52■□□□□ 0.08
LMX1A-202ENST00000342310 RTEL1-TNFRSF6BF6WH68 1400 aa15.52■□□□□ 0.08
LMX1A-202ENST00000342310 TNPO1Q92973 898 aaKnown RBP15.52■□□□□ 0.08
LMX1A-202ENST00000342310 IL1RAPL2Q9NP60 686 aa15.52■□□□□ 0.08
LMX1A-202ENST00000342310 CD2BP2O95400 341 aaKnown RBP15.52■□□□□ 0.08
LMX1A-202ENST00000342310 CALD1Q05682 793 aaKnown RBP15.52■□□□□ 0.08
LMX1A-202ENST00000342310 CLTCL1P53675 1640 aa15.52■□□□□ 0.07
LMX1A-202ENST00000342310 VAMP4O75379 141 aa15.52■□□□□ 0.07
LMX1A-202ENST00000342310 ANO2Q9NQ90 1003 aa15.52■□□□□ 0.07
LMX1A-202ENST00000342310 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.07
LMX1A-202ENST00000342310 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
LMX1A-202ENST00000342310 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
LMX1A-202ENST00000342310 MEIS3Q99687 375 aa15.51■□□□□ 0.07
LMX1A-202ENST00000342310 CAVIN1Q6NZI2 390 aaKnown RBP15.51■□□□□ 0.07
LMX1A-202ENST00000342310 RRAGDQ9NQL2 400 aaPredicted RBP15.51■□□□□ 0.07
LMX1A-202ENST00000342310 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
LMX1A-202ENST00000342310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
LMX1A-202ENST00000342310 NLRP6P59044 892 aa15.5■□□□□ 0.07
LMX1A-202ENST00000342310 XPCQ01831 940 aaPredicted RBP15.5■□□□□ 0.07
LMX1A-202ENST00000342310 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
LMX1A-202ENST00000342310 ANXA1P04083 346 aa15.49■□□□□ 0.07
LMX1A-202ENST00000342310 GLIPR1L2Q4G1C9 344 aa15.49■□□□□ 0.07
LMX1A-202ENST00000342310 API5Q9BZZ5 524 aaKnown RBP15.49■□□□□ 0.07
LMX1A-202ENST00000342310 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
LMX1A-202ENST00000342310 PLEKHF1Q96S99 279 aa15.49■□□□□ 0.07
LMX1A-202ENST00000342310 UPF3BQ9BZI7 483 aaKnown RBP15.49■□□□□ 0.07
LMX1A-202ENST00000342310 NUCB1Q02818 461 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 NEK4P51957 841 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 CHMP3Q9Y3E7 222 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 ABCC1P33527 1531 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 CDC45O75419 566 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
LMX1A-202ENST00000342310 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
LMX1A-202ENST00000342310 PRPF40AO75400 957 aaKnown RBP15.47■□□□□ 0.07
LMX1A-202ENST00000342310 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
LMX1A-202ENST00000342310 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
LMX1A-202ENST00000342310 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
LMX1A-202ENST00000342310 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
LMX1A-202ENST00000342310 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms