RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
PBX3-201ENST00000342287 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
PBX3-201ENST00000342287 NCKAP5LQ9HCH0 1330 aa19.3■□□□□ 0.68
PBX3-201ENST00000342287 BRPF3Q9ULD4 1205 aa19.3■□□□□ 0.68
PBX3-201ENST00000342287 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
PBX3-201ENST00000342287 MTHFSP49914 203 aa19.28■□□□□ 0.68
PBX3-201ENST00000342287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.28■□□□□ 0.68
PBX3-201ENST00000342287 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
PBX3-201ENST00000342287 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
PBX3-201ENST00000342287 CFAP53Q96M91 514 aa19.27■□□□□ 0.67
PBX3-201ENST00000342287 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
PBX3-201ENST00000342287 NUTM2FA1L443 756 aa19.26■□□□□ 0.67
PBX3-201ENST00000342287 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
PBX3-201ENST00000342287 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
PBX3-201ENST00000342287 ANKRD26Q9UPS8 1709 aa19.23■□□□□ 0.67
PBX3-201ENST00000342287 ACEP12821 1306 aa19.23■□□□□ 0.67
PBX3-201ENST00000342287 SMG6Q86US8 1419 aaKnown RBP19.21■□□□□ 0.67
PBX3-201ENST00000342287 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
PBX3-201ENST00000342287 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
PBX3-201ENST00000342287 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
PBX3-201ENST00000342287 RSPH6AQ9H0K4 717 aa19.21■□□□□ 0.67
PBX3-201ENST00000342287 KDM4FA0A1W2PPD8 638 aa19.2■□□□□ 0.66
PBX3-201ENST00000342287 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
PBX3-201ENST00000342287 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
PBX3-201ENST00000342287 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
PBX3-201ENST00000342287 NME9Q86XW9 330 aa19.2■□□□□ 0.66
PBX3-201ENST00000342287 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
PBX3-201ENST00000342287 AKAP12Q02952 1782 aa19.19■□□□□ 0.66
PBX3-201ENST00000342287 ANKARQ7Z5J8 1434 aa19.19■□□□□ 0.66
PBX3-201ENST00000342287 A0A0U1RQG5 324 aaPredicted RBP19.19■□□□□ 0.66
PBX3-201ENST00000342287 ITSN1Q15811 1721 aa19.19■□□□□ 0.66
PBX3-201ENST00000342287 COG3Q96JB2 828 aa19.18■□□□□ 0.66
PBX3-201ENST00000342287 NKTRP30414 1462 aaKnown RBP19.17■□□□□ 0.66
PBX3-201ENST00000342287 TTC21BQ7Z4L5 1316 aa19.17■□□□□ 0.66
PBX3-201ENST00000342287 USP6P35125 1406 aa19.17■□□□□ 0.66
PBX3-201ENST00000342287 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
PBX3-201ENST00000342287 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
PBX3-201ENST00000342287 NEFMP07197 916 aa19.16■□□□□ 0.66
PBX3-201ENST00000342287 NGDNQ8NEJ9 315 aaKnown RBP19.16■□□□□ 0.66
PBX3-201ENST00000342287 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
PBX3-201ENST00000342287 PPP4R2Q9NY27 417 aa19.15■□□□□ 0.66
PBX3-201ENST00000342287 SHPRHQ149N8 1683 aa19.14■□□□□ 0.66
PBX3-201ENST00000342287 RBM33Q96EV2 1170 aaKnown RBP19.14■□□□□ 0.65
PBX3-201ENST00000342287 ZRANB1Q9UGI0 708 aa19.14■□□□□ 0.65
PBX3-201ENST00000342287 NGEFQ8N5V2 710 aa19.14■□□□□ 0.65
PBX3-201ENST00000342287 ADGRL3Q9HAR2 1447 aa19.14■□□□□ 0.65
PBX3-201ENST00000342287 POLKQ9UBT6 870 aa19.14■□□□□ 0.65
PBX3-201ENST00000342287 FMN2Q9NZ56 1722 aa19.13■□□□□ 0.65
PBX3-201ENST00000342287 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
PBX3-201ENST00000342287 NWD1Q149M9 1564 aa19.13■□□□□ 0.65
PBX3-201ENST00000342287 APAF1O14727 1248 aa19.13■□□□□ 0.65
PBX3-201ENST00000342287 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
PBX3-201ENST00000342287 HSPA2P54652 639 aa19.12■□□□□ 0.65
PBX3-201ENST00000342287 C14orf37Q86TY3 774 aa19.12■□□□□ 0.65
PBX3-201ENST00000342287 SSH2Q76I76 1423 aa19.12■□□□□ 0.65
PBX3-201ENST00000342287 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
PBX3-201ENST00000342287 TTC21AQ8NDW8 1320 aa19.12■□□□□ 0.65
PBX3-201ENST00000342287 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
PBX3-201ENST00000342287 RUNDC1Q96C34 613 aa19.11■□□□□ 0.65
PBX3-201ENST00000342287 U2AF1L5P0DN76 240 aaPredicted RBP19.11■□□□□ 0.65
PBX3-201ENST00000342287 U2AF1Q01081 240 aaKnown RBP eCLIP19.11■□□□□ 0.65
PBX3-201ENST00000342287 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
PBX3-201ENST00000342287 NRKQ7Z2Y5 1582 aa19.11■□□□□ 0.65
PBX3-201ENST00000342287 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
PBX3-201ENST00000342287 DIAPH1O60610 1272 aaKnown RBP19.1■□□□□ 0.65
PBX3-201ENST00000342287 FBLN1P23142 703 aa19.1■□□□□ 0.65
PBX3-201ENST00000342287 RGPD8O14715 1765 aaPredicted RBP19.1■□□□□ 0.65
PBX3-201ENST00000342287 PPM1GO15355 546 aaPredicted RBP19.09■□□□□ 0.65
PBX3-201ENST00000342287 CDCA7LQ96GN5 454 aa19.09■□□□□ 0.65
PBX3-201ENST00000342287 ZNF521Q96K83 1311 aa19.09■□□□□ 0.65
PBX3-201ENST00000342287 U2SURPO15042 1029 aaKnown RBP19.08■□□□□ 0.64
PBX3-201ENST00000342287 PHF8Q9UPP1 1060 aa19.08■□□□□ 0.64
PBX3-201ENST00000342287 EMILIN1Q9Y6C2 1016 aa19.07■□□□□ 0.64
PBX3-201ENST00000342287 GOLGA2Q08379 1002 aa19.06■□□□□ 0.64
PBX3-201ENST00000342287 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
PBX3-201ENST00000342287 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
PBX3-201ENST00000342287 LMTK3Q96Q04 1460 aa19.06■□□□□ 0.64
PBX3-201ENST00000342287 TCP11L2Q8N4U5 519 aa19.05■□□□□ 0.64
PBX3-201ENST00000342287 C19orf44Q9H6X5 657 aa19.04■□□□□ 0.64
PBX3-201ENST00000342287 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
PBX3-201ENST00000342287 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
PBX3-201ENST00000342287 ESCO1Q5FWF5 840 aa19.04■□□□□ 0.64
PBX3-201ENST00000342287 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
PBX3-201ENST00000342287 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
PBX3-201ENST00000342287 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
PBX3-201ENST00000342287 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
PBX3-201ENST00000342287 USP35Q9P2H5 1018 aa19.02■□□□□ 0.63
PBX3-201ENST00000342287 PLEKHF1Q96S99 279 aa19.01■□□□□ 0.63
PBX3-201ENST00000342287 PDE4CQ08493 712 aa19.01■□□□□ 0.63
PBX3-201ENST00000342287 RNF123Q5XPI4 1314 aa19.01■□□□□ 0.63
PBX3-201ENST00000342287 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
PBX3-201ENST00000342287 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
PBX3-201ENST00000342287 SLFN5Q08AF3 891 aa19■□□□□ 0.63
PBX3-201ENST00000342287 WWC1Q8IX03 1113 aa19■□□□□ 0.63
PBX3-201ENST00000342287 RCAN3Q9UKA8 241 aa19■□□□□ 0.63
PBX3-201ENST00000342287 IQSEC2Q5JU85 1478 aa19■□□□□ 0.63
PBX3-201ENST00000342287 FCHSD2O94868 740 aa19■□□□□ 0.63
PBX3-201ENST00000342287 IL13P35225 146 aa18.99■□□□□ 0.63
PBX3-201ENST00000342287 NLRP6P59044 892 aa18.99■□□□□ 0.63
PBX3-201ENST00000342287 NEUROD2Q15784 382 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms