RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 GORABQ5T7V8 394 aa15.11■□□□□ 0.01
SSX2IP-201ENST00000342203 PPP4R3BQ5MIZ7 849 aa15.1■□□□□ 0.01
SSX2IP-201ENST00000342203 CREBRFQ8IUR6 639 aa15.1■□□□□ 0.01
SSX2IP-201ENST00000342203 CGNQ9P2M7 1197 aaKnown RBP15.1■□□□□ 0.01
SSX2IP-201ENST00000342203 EIF2S2P20042 333 aaKnown RBP15.1■□□□□ 0.01
SSX2IP-201ENST00000342203 OFD1O75665 1012 aa15.1■□□□□ 0.01
SSX2IP-201ENST00000342203 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
SSX2IP-201ENST00000342203 TRERF1Q96PN7 1200 aa15.09■□□□□ 0.01
SSX2IP-201ENST00000342203 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
SSX2IP-201ENST00000342203 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
SSX2IP-201ENST00000342203 CCDC112Q8NEF3 446 aa15.09■□□□□ 0.01
SSX2IP-201ENST00000342203 LARP6Q9BRS8 491 aaKnown RBP15.09■□□□□ 0.01
SSX2IP-201ENST00000342203 FMNL2Q96PY5 1086 aa15.08■□□□□ 0.01
SSX2IP-201ENST00000342203 DYNC1I1O14576 645 aa15.08■□□□□ 0
SSX2IP-201ENST00000342203 CEBPZQ03701 1054 aaKnown RBP15.08■□□□□ 0
SSX2IP-201ENST00000342203 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
SSX2IP-201ENST00000342203 COG3Q96JB2 828 aa15.07■□□□□ 0
SSX2IP-201ENST00000342203 PTPRGP23470 1445 aa15.07■□□□□ 0
SSX2IP-201ENST00000342203 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
SSX2IP-201ENST00000342203 MCM2P49736 904 aa15.07■□□□□ 0
SSX2IP-201ENST00000342203 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
SSX2IP-201ENST00000342203 TTC12Q9H892 705 aaPredicted RBP15.07■□□□□ 0
SSX2IP-201ENST00000342203 ZKSCAN5Q9Y2L8 839 aa15.06■□□□□ 0
SSX2IP-201ENST00000342203 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
SSX2IP-201ENST00000342203 BMP2KLQ5H9B9 411 aa15.06■□□□□ 0
SSX2IP-201ENST00000342203 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
SSX2IP-201ENST00000342203 CCDC66A2RUB6 948 aa15.06■□□□□ 0
SSX2IP-201ENST00000342203 FERMT3Q86UX7 667 aa15.06■□□□□ 0
SSX2IP-201ENST00000342203 AMPHP49418 695 aa15.05■□□□□ 0
SSX2IP-201ENST00000342203 GAS2L3Q86XJ1 694 aa15.05■□□□□ 0
SSX2IP-201ENST00000342203 MNS1Q8NEH6 495 aa15.05■□□□□ 0
SSX2IP-201ENST00000342203 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.05■□□□□ 0
SSX2IP-201ENST00000342203 TROQ12816 1431 aaPredicted RBP15.05■□□□□ 0
SSX2IP-201ENST00000342203 RAB3GAP1Q15042 981 aa15.05■□□□□ 0
SSX2IP-201ENST00000342203 NSD3Q9BZ95 1437 aa15.05■□□□□ 0
SSX2IP-201ENST00000342203 SURF6O75683 361 aaKnown RBP15.05■□□□□ -0
SSX2IP-201ENST00000342203 TEX35Q5T0J7 233 aa15.05■□□□□ -0
SSX2IP-201ENST00000342203 FILIP1Q7Z7B0 1213 aa15.05■□□□□ -0
SSX2IP-201ENST00000342203 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
SSX2IP-201ENST00000342203 TESK2Q96S53 571 aa15.05■□□□□ -0
SSX2IP-201ENST00000342203 CCDC192P0DO97 292 aa15.05■□□□□ -0
SSX2IP-201ENST00000342203 GPRASP1Q5JY77 1395 aa15.05■□□□□ -0
SSX2IP-201ENST00000342203 HCLS1P14317 486 aaPredicted RBP15.04■□□□□ -0
SSX2IP-201ENST00000342203 CAMK4Q16566 473 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 GOLGA6L1Q8N7Z2 621 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
SSX2IP-201ENST00000342203 IL1RAPL2Q9NP60 686 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 ADCY5O95622 1261 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 SLC4A2P04920 1241 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 ZNF428Q96B54 188 aa15.04■□□□□ -0
SSX2IP-201ENST00000342203 C16orf45Q96MC5 204 aaPredicted RBP15.04■□□□□ -0
SSX2IP-201ENST00000342203 TPM3P06753 285 aa15.03■□□□□ -0
SSX2IP-201ENST00000342203 NESP48681 1621 aa15.03■□□□□ -0
SSX2IP-201ENST00000342203 TSC1Q92574 1164 aa15.03■□□□□ -0
SSX2IP-201ENST00000342203 LETM1O95202 739 aaPredicted RBP15.03■□□□□ -0
SSX2IP-201ENST00000342203 ZGPATQ8N5A5 531 aaKnown RBP15.02■□□□□ -0
SSX2IP-201ENST00000342203 STAC3Q96MF2 364 aa15.02■□□□□ -0
SSX2IP-201ENST00000342203 RBSNQ9H1K0 784 aa15.02■□□□□ -0
SSX2IP-201ENST00000342203 IFIT2P09913 472 aaKnown RBP15.02■□□□□ -0
SSX2IP-201ENST00000342203 DCTN1Q14203 1278 aa15.02■□□□□ -0
SSX2IP-201ENST00000342203 TSHZ3Q63HK5 1081 aa15.02■□□□□ -0
SSX2IP-201ENST00000342203 SDF4Q9BRK5 362 aa15.02■□□□□ -0
SSX2IP-201ENST00000342203 SMC5Q8IY18 1101 aa15.02□□□□□ -0.01
SSX2IP-201ENST00000342203 CCDC73Q6ZRK6 1079 aa15.02□□□□□ -0.01
SSX2IP-201ENST00000342203 STK3Q13188 491 aa15.01□□□□□ -0.01
SSX2IP-201ENST00000342203 LRSAM1Q6UWE0 723 aa15.01□□□□□ -0.01
SSX2IP-201ENST00000342203 TNMDQ9H2S6 317 aa15.01□□□□□ -0.01
SSX2IP-201ENST00000342203 SKIDA1Q1XH10 827 aa15□□□□□ -0.01
SSX2IP-201ENST00000342203 NUCB1Q02818 461 aa15□□□□□ -0.01
SSX2IP-201ENST00000342203 SNX21Q969T3 373 aa15□□□□□ -0.01
SSX2IP-201ENST00000342203 GPS2Q13227 327 aa15□□□□□ -0.01
SSX2IP-201ENST00000342203 C9orf78Q9NZ63 289 aaPredicted RBP15□□□□□ -0.01
SSX2IP-201ENST00000342203 HDAC1Q13547 482 aaPredicted RBP15□□□□□ -0.01
SSX2IP-201ENST00000342203 NOLC1Q14978 699 aaKnown RBP eCLIP15□□□□□ -0.01
SSX2IP-201ENST00000342203 UBTFL1P0CB47 393 aaPredicted RBP14.99□□□□□ -0.01
SSX2IP-201ENST00000342203 ARGLU1Q9NWB6 273 aaPredicted RBP14.99□□□□□ -0.01
SSX2IP-201ENST00000342203 C16orf71Q8IYS4 520 aaPredicted RBP14.99□□□□□ -0.01
SSX2IP-201ENST00000342203 FAM177A1Q8N128 213 aaPredicted RBP14.99□□□□□ -0.01
SSX2IP-201ENST00000342203 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
SSX2IP-201ENST00000342203 MCM5P33992 734 aa14.99□□□□□ -0.01
SSX2IP-201ENST00000342203 ZNF330Q9Y3S2 320 aaPredicted RBP14.98□□□□□ -0.01
SSX2IP-201ENST00000342203 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
SSX2IP-201ENST00000342203 LARP1BQ659C4 914 aaKnown RBP14.98□□□□□ -0.01
SSX2IP-201ENST00000342203 CKAP2LQ8IYA6 745 aa14.98□□□□□ -0.01
SSX2IP-201ENST00000342203 C17orf53Q8N3J3 647 aaPredicted RBP14.98□□□□□ -0.01
SSX2IP-201ENST00000342203 SMC2O95347 1197 aa14.98□□□□□ -0.01
SSX2IP-201ENST00000342203 GIMAP6Q6P9H5 292 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 RALGAPBQ86X10 1494 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 CAMSAP2Q08AD1 1489 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 NGDNQ8NEJ9 315 aaKnown RBP14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 NUP62CLQ9H1M0 184 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 SCAPERQ9BY12 1400 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 GNAI2P04899 355 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 KRT85P78386 507 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 CCDC183Q5T5S1 534 aa14.97□□□□□ -0.01
SSX2IP-201ENST00000342203 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms