RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
COL22A1-202ENST00000341807 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
COL22A1-202ENST00000341807 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
COL22A1-202ENST00000341807 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
COL22A1-202ENST00000341807 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
COL22A1-202ENST00000341807 ZNF518AQ6AHZ1 1483 aa16.49■□□□□ 0.23
COL22A1-202ENST00000341807 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
COL22A1-202ENST00000341807 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
COL22A1-202ENST00000341807 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
COL22A1-202ENST00000341807 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
COL22A1-202ENST00000341807 ZBTB40Q9NUA8 1239 aa16.47■□□□□ 0.23
COL22A1-202ENST00000341807 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
COL22A1-202ENST00000341807 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
COL22A1-202ENST00000341807 TRIM44Q96DX7 344 aaPredicted RBP16.47■□□□□ 0.23
COL22A1-202ENST00000341807 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
COL22A1-202ENST00000341807 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
COL22A1-202ENST00000341807 CEP152O94986 1710 aa16.46■□□□□ 0.23
COL22A1-202ENST00000341807 MYOM1P52179 1685 aa16.46■□□□□ 0.23
COL22A1-202ENST00000341807 XRCC6P12956 609 aaKnown RBP eCLIP16.46■□□□□ 0.22
COL22A1-202ENST00000341807 SMC5Q8IY18 1101 aa16.46■□□□□ 0.22
COL22A1-202ENST00000341807 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.22
COL22A1-202ENST00000341807 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
COL22A1-202ENST00000341807 ESF1Q9H501 851 aaKnown RBP16.45■□□□□ 0.22
COL22A1-202ENST00000341807 FCHSD2O94868 740 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 TWISTNBQ3B726 338 aaPredicted RBP16.44■□□□□ 0.22
COL22A1-202ENST00000341807 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 NME9Q86XW9 330 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 SLC52A1Q9NWF4 448 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 NSD2O96028 1365 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
COL22A1-202ENST00000341807 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
COL22A1-202ENST00000341807 NUCB1Q02818 461 aa16.43■□□□□ 0.22
COL22A1-202ENST00000341807 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
COL22A1-202ENST00000341807 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
COL22A1-202ENST00000341807 KIF1BO60333 1816 aa16.43■□□□□ 0.22
COL22A1-202ENST00000341807 CALD1Q05682 793 aaKnown RBP16.43■□□□□ 0.22
COL22A1-202ENST00000341807 EFCAB6Q5THR3 1501 aa16.43■□□□□ 0.22
COL22A1-202ENST00000341807 GNAI1P63096 354 aa16.42■□□□□ 0.22
COL22A1-202ENST00000341807 RRAGDQ9NQL2 400 aaPredicted RBP16.42■□□□□ 0.22
COL22A1-202ENST00000341807 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
COL22A1-202ENST00000341807 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
COL22A1-202ENST00000341807 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
COL22A1-202ENST00000341807 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
COL22A1-202ENST00000341807 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
COL22A1-202ENST00000341807 FOXD4L5Q5VV16 416 aaPredicted RBP16.41■□□□□ 0.22
COL22A1-202ENST00000341807 FOXD4L4Q8WXT5 416 aaPredicted RBP16.41■□□□□ 0.22
COL22A1-202ENST00000341807 NCKAP5LQ9HCH0 1330 aa16.41■□□□□ 0.22
COL22A1-202ENST00000341807 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
COL22A1-202ENST00000341807 TNPO1Q92973 898 aaKnown RBP16.41■□□□□ 0.22
COL22A1-202ENST00000341807 COG3Q96JB2 828 aa16.41■□□□□ 0.22
COL22A1-202ENST00000341807 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
COL22A1-202ENST00000341807 ABCC11Q96J66 1382 aa16.4■□□□□ 0.22
COL22A1-202ENST00000341807 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.22
COL22A1-202ENST00000341807 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.22
COL22A1-202ENST00000341807 ALDH1L2Q3SY69 923 aa16.39■□□□□ 0.21
COL22A1-202ENST00000341807 ANP32BQ92688 251 aaKnown RBP16.39■□□□□ 0.21
COL22A1-202ENST00000341807 VAMP4O75379 141 aa16.39■□□□□ 0.21
COL22A1-202ENST00000341807 C8orf58Q8NAV2 365 aa16.39■□□□□ 0.21
COL22A1-202ENST00000341807 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
COL22A1-202ENST00000341807 IL16Q14005 1332 aa16.38■□□□□ 0.21
COL22A1-202ENST00000341807 KRT24Q2M2I5 525 aa16.38■□□□□ 0.21
COL22A1-202ENST00000341807 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
COL22A1-202ENST00000341807 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
COL22A1-202ENST00000341807 DDX49Q9Y6V7 483 aaKnown RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 MRE11P49959 708 aa16.37■□□□□ 0.21
COL22A1-202ENST00000341807 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 GRPEL1Q9HAV7 217 aa16.37■□□□□ 0.21
COL22A1-202ENST00000341807 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
COL22A1-202ENST00000341807 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 C16orf71Q8IYS4 520 aaPredicted RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
COL22A1-202ENST00000341807 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
COL22A1-202ENST00000341807 CDC45O75419 566 aa16.36■□□□□ 0.21
COL22A1-202ENST00000341807 SSFA2P28290 1259 aa16.36■□□□□ 0.21
COL22A1-202ENST00000341807 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
COL22A1-202ENST00000341807 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
COL22A1-202ENST00000341807 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
COL22A1-202ENST00000341807 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
COL22A1-202ENST00000341807 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
COL22A1-202ENST00000341807 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
COL22A1-202ENST00000341807 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
COL22A1-202ENST00000341807 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
COL22A1-202ENST00000341807 CD2BP2O95400 341 aaKnown RBP16.35■□□□□ 0.21
COL22A1-202ENST00000341807 NLRP1Q9C000 1473 aa16.34■□□□□ 0.21
COL22A1-202ENST00000341807 MCM10Q7L590 875 aa16.34■□□□□ 0.21
COL22A1-202ENST00000341807 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
COL22A1-202ENST00000341807 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
COL22A1-202ENST00000341807 ADGRB3O60242 1522 aa16.33■□□□□ 0.21
COL22A1-202ENST00000341807 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
COL22A1-202ENST00000341807 TULP4Q9NRJ4 1543 aa16.33■□□□□ 0.2
COL22A1-202ENST00000341807 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
COL22A1-202ENST00000341807 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
COL22A1-202ENST00000341807 ARAP3Q8WWN8 1544 aa16.33■□□□□ 0.2
COL22A1-202ENST00000341807 VWDEQ8N2E2 1590 aa16.32■□□□□ 0.2
COL22A1-202ENST00000341807 FOXD4L6Q3SYB3 417 aaPredicted RBP16.32■□□□□ 0.2
COL22A1-202ENST00000341807 FOXD4L3Q6VB84 417 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms