RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 VPS37CA5D8V6 355 aaPredicted RBP14.65□□□□□ -0.06
CDH5-201ENST00000341529 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.06
CDH5-201ENST00000341529 KIAA0556O60303 1618 aa14.65□□□□□ -0.06
CDH5-201ENST00000341529 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
CDH5-201ENST00000341529 USHBP1Q8N6Y0 703 aa14.65□□□□□ -0.06
CDH5-201ENST00000341529 TOMM22Q9NS69 142 aa14.65□□□□□ -0.06
CDH5-201ENST00000341529 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
CDH5-201ENST00000341529 CCDC61Q9Y6R9 512 aa14.64□□□□□ -0.07
CDH5-201ENST00000341529 GPRASP1Q5JY77 1395 aa14.64□□□□□ -0.07
CDH5-201ENST00000341529 PZPP20742 1482 aa14.64□□□□□ -0.07
CDH5-201ENST00000341529 PRAG1Q86YV5 1406 aa14.64□□□□□ -0.07
CDH5-201ENST00000341529 WDR62O43379 1518 aa14.63□□□□□ -0.07
CDH5-201ENST00000341529 CAVIN1Q6NZI2 390 aaKnown RBP14.63□□□□□ -0.07
CDH5-201ENST00000341529 NFE2L2Q16236 605 aa14.63□□□□□ -0.07
CDH5-201ENST00000341529 CCDC27Q2M243 656 aa14.63□□□□□ -0.07
CDH5-201ENST00000341529 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
CDH5-201ENST00000341529 NCKAP5LQ9HCH0 1330 aa14.63□□□□□ -0.07
CDH5-201ENST00000341529 FCHSD2O94868 740 aa14.63□□□□□ -0.07
CDH5-201ENST00000341529 SYTL4Q96C24 671 aaPredicted RBP14.63□□□□□ -0.07
CDH5-201ENST00000341529 CTTNBP2Q8WZ74 1663 aa14.62□□□□□ -0.07
CDH5-201ENST00000341529 LRPPRCP42704 1394 aaKnown RBP14.62□□□□□ -0.07
CDH5-201ENST00000341529 KIAA2012Q0VF49 1180 aa14.62□□□□□ -0.07
CDH5-201ENST00000341529 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
CDH5-201ENST00000341529 SEC24BO95487 1268 aa14.62□□□□□ -0.07
CDH5-201ENST00000341529 TSHZ3Q63HK5 1081 aa14.62□□□□□ -0.07
CDH5-201ENST00000341529 FBXW7Q969H0 707 aa14.62□□□□□ -0.07
CDH5-201ENST00000341529 C14orf93Q9H972 538 aaKnown RBP14.62□□□□□ -0.07
CDH5-201ENST00000341529 NKTRP30414 1462 aaKnown RBP14.61□□□□□ -0.07
CDH5-201ENST00000341529 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
CDH5-201ENST00000341529 SYAP1Q96A49 352 aaPredicted RBP14.61□□□□□ -0.07
CDH5-201ENST00000341529 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
CDH5-201ENST00000341529 SIL1Q9H173 461 aa14.61□□□□□ -0.07
CDH5-201ENST00000341529 ISY1Q9ULR0 285 aaKnown RBP14.61□□□□□ -0.07
CDH5-201ENST00000341529 KDM4AO75164 1064 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
CDH5-201ENST00000341529 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 TBC1D2Q9BYX2 928 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 SCAF11Q99590 1463 aaKnown RBP14.6□□□□□ -0.07
CDH5-201ENST00000341529 NEXNQ0ZGT2 675 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 RALGAPBQ86X10 1494 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 FYB1O15117 783 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 PLCH2O75038 1416 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 RIC3Q7Z5B4 369 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 NEUROD6Q96NK8 337 aa14.6□□□□□ -0.07
CDH5-201ENST00000341529 KRT24Q2M2I5 525 aa14.59□□□□□ -0.07
CDH5-201ENST00000341529 G3BP1Q13283 466 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDH5-201ENST00000341529 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
CDH5-201ENST00000341529 TCOF1Q13428 1488 aaKnown RBP14.59□□□□□ -0.07
CDH5-201ENST00000341529 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.07
CDH5-201ENST00000341529 ATAD2Q6PL18 1390 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 RPGRIP1LQ68CZ1 1315 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 MCM4P33991 863 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 GCC1Q96CN9 775 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 LARP6Q9BRS8 491 aaKnown RBP14.57□□□□□ -0.08
CDH5-201ENST00000341529 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 NUP160Q12769 1436 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 ZC3H6P61129 1189 aaKnown RBP14.57□□□□□ -0.08
CDH5-201ENST00000341529 AAMPQ13685 434 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 GNAI2P04899 355 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 PTMSP20962 102 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 CCDC30Q5VVM6 783 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 AEBP1Q8IUX7 1158 aa14.57□□□□□ -0.08
CDH5-201ENST00000341529 H3BQV1 296 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 ANXA1P04083 346 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 IFFO2Q5TF58 517 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
CDH5-201ENST00000341529 CHAF1AQ13111 956 aaPredicted RBP14.56□□□□□ -0.08
CDH5-201ENST00000341529 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 TEX14Q8IWB6 1497 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 MYL6BP14649 208 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 ZNF530Q6P9A1 599 aaPredicted RBP14.56□□□□□ -0.08
CDH5-201ENST00000341529 NUTM1Q86Y26 1132 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 CFAP43Q8NDM7 1665 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 SKOR2Q2VWA4 1001 aaPredicted RBP14.56□□□□□ -0.08
CDH5-201ENST00000341529 THEMISQ8N1K5 641 aaPredicted RBP14.56□□□□□ -0.08
CDH5-201ENST00000341529 GAS2L2Q8NHY3 880 aa14.56□□□□□ -0.08
CDH5-201ENST00000341529 KDM6BO15054 1643 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 EVA1CP58658 441 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 C8orf34Q49A92 452 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 FAM184AQ8NB25 1140 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
CDH5-201ENST00000341529 HSP90AB2PQ58FF8 381 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 TSPYL6Q8N831 410 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 FOXO3O43524 673 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 GNAI3P08754 354 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
CDH5-201ENST00000341529 HDAC5Q9UQL6 1122 aa14.55□□□□□ -0.08
CDH5-201ENST00000341529 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
CDH5-201ENST00000341529 FIBPO43427 364 aa14.54□□□□□ -0.08
CDH5-201ENST00000341529 ATF3P18847 181 aa14.54□□□□□ -0.08
CDH5-201ENST00000341529 NUCB2P80303 420 aa14.54□□□□□ -0.08
CDH5-201ENST00000341529 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
CDH5-201ENST00000341529 PHACTR3Q96KR7 559 aa14.54□□□□□ -0.08
CDH5-201ENST00000341529 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
CDH5-201ENST00000341529 MBIPQ9NS73 344 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms