RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 ARID3AQ99856 593 aa10.16□□□□□ -0.78
NBR1-201ENST00000341165 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
NBR1-201ENST00000341165 RARSP54136 660 aaKnown RBP10.15□□□□□ -0.78
NBR1-201ENST00000341165 LAS1LQ9Y4W2 734 aaKnown RBP10.15□□□□□ -0.78
NBR1-201ENST00000341165 IL16Q14005 1332 aa10.15□□□□□ -0.78
NBR1-201ENST00000341165 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.78
NBR1-201ENST00000341165 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
NBR1-201ENST00000341165 RIMS2Q9UQ26 1411 aa10.15□□□□□ -0.79
NBR1-201ENST00000341165 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.79
NBR1-201ENST00000341165 TULP4Q9NRJ4 1543 aa10.14□□□□□ -0.79
NBR1-201ENST00000341165 SPINK5Q9NQ38 1064 aaPredicted RBP10.14□□□□□ -0.79
NBR1-201ENST00000341165 AGLP35573 1532 aa10.14□□□□□ -0.79
NBR1-201ENST00000341165 LMOD3Q0VAK6 560 aa10.14□□□□□ -0.79
NBR1-201ENST00000341165 USP35Q9P2H5 1018 aa10.14□□□□□ -0.79
NBR1-201ENST00000341165 BECN1Q14457 450 aa10.14□□□□□ -0.79
NBR1-201ENST00000341165 FCHSD2O94868 740 aa10.13□□□□□ -0.79
NBR1-201ENST00000341165 RIPK4P57078 832 aa10.13□□□□□ -0.79
NBR1-201ENST00000341165 PANK1Q8TE04 598 aa10.13□□□□□ -0.79
NBR1-201ENST00000341165 PREX1Q8TCU6 1659 aa10.13□□□□□ -0.79
NBR1-201ENST00000341165 MED14O60244 1454 aa10.13□□□□□ -0.79
NBR1-201ENST00000341165 FYB1O15117 783 aa10.13□□□□□ -0.79
NBR1-201ENST00000341165 TMPOP42166 694 aaKnown RBP10.13□□□□□ -0.79
NBR1-201ENST00000341165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.13□□□□□ -0.79
NBR1-201ENST00000341165 DZIP1LQ8IYY4 767 aaKnown RBP10.13□□□□□ -0.79
NBR1-201ENST00000341165 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
NBR1-201ENST00000341165 COG3Q96JB2 828 aa10.12□□□□□ -0.79
NBR1-201ENST00000341165 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
NBR1-201ENST00000341165 DDX19BQ9UMR2 479 aa10.12□□□□□ -0.79
NBR1-201ENST00000341165 KIF16BQ96L93 1317 aa10.12□□□□□ -0.79
NBR1-201ENST00000341165 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
NBR1-201ENST00000341165 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
NBR1-201ENST00000341165 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
NBR1-201ENST00000341165 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
NBR1-201ENST00000341165 TMEM131LA2VDJ0 1609 aa10.11□□□□□ -0.79
NBR1-201ENST00000341165 PHF23Q9BUL5 403 aaPredicted RBP10.11□□□□□ -0.79
NBR1-201ENST00000341165 SIGLEC1Q9BZZ2 1709 aa10.11□□□□□ -0.79
NBR1-201ENST00000341165 ALKQ9UM73 1620 aa10.1□□□□□ -0.79
NBR1-201ENST00000341165 WASLO00401 505 aaPredicted RBP10.1□□□□□ -0.79
NBR1-201ENST00000341165 SIRT1Q96EB6 747 aa10.1□□□□□ -0.79
NBR1-201ENST00000341165 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
NBR1-201ENST00000341165 PTPRMP28827 1452 aa10.1□□□□□ -0.79
NBR1-201ENST00000341165 EID1Q9Y6B2 187 aa10.1□□□□□ -0.79
NBR1-201ENST00000341165 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
NBR1-201ENST00000341165 MVPQ14764 893 aaKnown RBP10.1□□□□□ -0.79
NBR1-201ENST00000341165 ATP7BP35670 1465 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 ITPRIPQ8IWB1 547 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 BCL2L13Q9BXK5 485 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 EXOSC9Q06265 439 aaKnown RBP10.09□□□□□ -0.79
NBR1-201ENST00000341165 DMRT2Q9Y5R5 561 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 IQSEC2Q5JU85 1478 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 TRIM44Q96DX7 344 aaPredicted RBP10.09□□□□□ -0.79
NBR1-201ENST00000341165 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
NBR1-201ENST00000341165 CCDC61Q9Y6R9 512 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
NBR1-201ENST00000341165 GNAI1P63096 354 aa10.08□□□□□ -0.8
NBR1-201ENST00000341165 WAPLQ7Z5K2 1190 aa10.08□□□□□ -0.8
NBR1-201ENST00000341165 A2ML1A8K2U0 1454 aa10.08□□□□□ -0.8
NBR1-201ENST00000341165 TNRQ92752 1358 aa10.08□□□□□ -0.8
NBR1-201ENST00000341165 ALDH1L2Q3SY69 923 aa10.08□□□□□ -0.8
NBR1-201ENST00000341165 ZMYM3Q14202 1370 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 NUDT16Q96DE0 195 aaKnown RBP10.07□□□□□ -0.8
NBR1-201ENST00000341165 EDC4Q6P2E9 1401 aaKnown RBP10.07□□□□□ -0.8
NBR1-201ENST00000341165 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 TXNDC2Q86VQ3 553 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 RIMBP3CA6NJZ7 1639 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 RIMBP3BA6NNM3 1639 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 RIMBP3Q9UFD9 1639 aa10.07□□□□□ -0.8
NBR1-201ENST00000341165 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 TSR2Q969E8 191 aaKnown RBP10.06□□□□□ -0.8
NBR1-201ENST00000341165 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 SPATA31D1Q6ZQQ2 1576 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 PPIP5K1Q6PFW1 1433 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 IL27Q8NEV9 243 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 ARHGEF40Q8TER5 1519 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 IGHDP01880 384 aa10.06□□□□□ -0.8
NBR1-201ENST00000341165 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
NBR1-201ENST00000341165 C8orf34Q49A92 452 aa10.05□□□□□ -0.8
NBR1-201ENST00000341165 FAM135BQ49AJ0 1406 aa10.05□□□□□ -0.8
NBR1-201ENST00000341165 CLTCQ00610 1675 aaKnown RBP10.04□□□□□ -0.8
NBR1-201ENST00000341165 TSPOAP1O95153 1857 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 POLKQ9UBT6 870 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 PNPLA6Q8IY17 1366 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 SSH1Q8WYL5 1049 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
NBR1-201ENST00000341165 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
NBR1-201ENST00000341165 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
NBR1-201ENST00000341165 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
NBR1-201ENST00000341165 SKAP1Q86WV1 359 aa10.03□□□□□ -0.8
NBR1-201ENST00000341165 HMOX1P09601 288 aa10.03□□□□□ -0.8
NBR1-201ENST00000341165 API5Q9BZZ5 524 aaKnown RBP10.02□□□□□ -0.8
NBR1-201ENST00000341165 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
NBR1-201ENST00000341165 ADGRB2O60241 1585 aa10.02□□□□□ -0.81
NBR1-201ENST00000341165 TRIM27P14373 513 aa10.02□□□□□ -0.81
NBR1-201ENST00000341165 HDAC1Q13547 482 aaPredicted RBP10.02□□□□□ -0.81
NBR1-201ENST00000341165 TMEM2Q9UHN6 1383 aa10.01□□□□□ -0.81
NBR1-201ENST00000341165 NME9Q86XW9 330 aa10.01□□□□□ -0.81
NBR1-201ENST00000341165 RLBP1P12271 317 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms