RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 USP6P35125 1406 aa18.36■□□□□ 0.53
TUBD1-202ENST00000340993 CD163L1Q9NR16 1453 aa18.36■□□□□ 0.53
TUBD1-202ENST00000340993 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
TUBD1-202ENST00000340993 MED1Q15648 1581 aaPredicted RBP18.36■□□□□ 0.53
TUBD1-202ENST00000340993 ALS2Q96Q42 1657 aa18.36■□□□□ 0.53
TUBD1-202ENST00000340993 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
TUBD1-202ENST00000340993 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
TUBD1-202ENST00000340993 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
TUBD1-202ENST00000340993 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
TUBD1-202ENST00000340993 SOX12O15370 315 aa18.35■□□□□ 0.53
TUBD1-202ENST00000340993 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
TUBD1-202ENST00000340993 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
TUBD1-202ENST00000340993 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.53
TUBD1-202ENST00000340993 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
TUBD1-202ENST00000340993 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
TUBD1-202ENST00000340993 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
TUBD1-202ENST00000340993 PIK3C2AO00443 1686 aa18.32■□□□□ 0.52
TUBD1-202ENST00000340993 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
TUBD1-202ENST00000340993 NRKQ7Z2Y5 1582 aa18.32■□□□□ 0.52
TUBD1-202ENST00000340993 C8orf37Q96NL8 207 aa18.32■□□□□ 0.52
TUBD1-202ENST00000340993 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
TUBD1-202ENST00000340993 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
TUBD1-202ENST00000340993 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
TUBD1-202ENST00000340993 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
TUBD1-202ENST00000340993 COL22A1Q8NFW1 1626 aaPredicted RBP18.31■□□□□ 0.52
TUBD1-202ENST00000340993 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
TUBD1-202ENST00000340993 CNGB1Q14028 1251 aaPredicted RBP18.3■□□□□ 0.52
TUBD1-202ENST00000340993 NME9Q86XW9 330 aa18.3■□□□□ 0.52
TUBD1-202ENST00000340993 NLRP6P59044 892 aa18.3■□□□□ 0.52
TUBD1-202ENST00000340993 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
TUBD1-202ENST00000340993 PUS7Q96PZ0 661 aaKnown RBP18.29■□□□□ 0.52
TUBD1-202ENST00000340993 ANKRD36BQ8N2N9 1353 aa18.28■□□□□ 0.52
TUBD1-202ENST00000340993 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
TUBD1-202ENST00000340993 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.52
TUBD1-202ENST00000340993 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.52
TUBD1-202ENST00000340993 ZC3H6P61129 1189 aaKnown RBP18.27■□□□□ 0.51
TUBD1-202ENST00000340993 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.51
TUBD1-202ENST00000340993 PANK3Q9H999 370 aa18.26■□□□□ 0.51
TUBD1-202ENST00000340993 SSH2Q76I76 1423 aa18.26■□□□□ 0.51
TUBD1-202ENST00000340993 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
TUBD1-202ENST00000340993 CCDC7Q96M83 1385 aa18.26■□□□□ 0.51
TUBD1-202ENST00000340993 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
TUBD1-202ENST00000340993 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
TUBD1-202ENST00000340993 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
TUBD1-202ENST00000340993 CHRNA2Q15822 529 aa18.24■□□□□ 0.51
TUBD1-202ENST00000340993 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
TUBD1-202ENST00000340993 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
TUBD1-202ENST00000340993 KIF20BQ96Q89 1820 aa18.24■□□□□ 0.51
TUBD1-202ENST00000340993 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
TUBD1-202ENST00000340993 AFF2P51816 1311 aa18.21■□□□□ 0.51
TUBD1-202ENST00000340993 TTC21AQ8NDW8 1320 aa18.21■□□□□ 0.51
TUBD1-202ENST00000340993 FBLN1P23142 703 aa18.21■□□□□ 0.51
TUBD1-202ENST00000340993 KIAA0232Q92628 1395 aa18.2■□□□□ 0.5
TUBD1-202ENST00000340993 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
TUBD1-202ENST00000340993 GCP02774 474 aa18.19■□□□□ 0.5
TUBD1-202ENST00000340993 PLCH1Q4KWH8 1693 aa18.19■□□□□ 0.5
TUBD1-202ENST00000340993 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
TUBD1-202ENST00000340993 TNNT2P45379 298 aaPredicted RBP18.18■□□□□ 0.5
TUBD1-202ENST00000340993 RGS17Q9UGC6 210 aaPredicted RBP18.18■□□□□ 0.5
TUBD1-202ENST00000340993 USP19O94966 1318 aa18.18■□□□□ 0.5
TUBD1-202ENST00000340993 BRD4O60885 1362 aaPredicted RBP18.18■□□□□ 0.5
TUBD1-202ENST00000340993 FYB1O15117 783 aa18.17■□□□□ 0.5
TUBD1-202ENST00000340993 COG3Q96JB2 828 aa18.17■□□□□ 0.5
TUBD1-202ENST00000340993 LTN1O94822 1766 aa18.15■□□□□ 0.5
TUBD1-202ENST00000340993 USP21Q9UK80 565 aa18.15■□□□□ 0.5
TUBD1-202ENST00000340993 SLIT3O75094 1523 aa18.15■□□□□ 0.5
TUBD1-202ENST00000340993 RGPD5Q99666 1765 aa18.15■□□□□ 0.5
TUBD1-202ENST00000340993 STRN4Q9NRL3 753 aa18.14■□□□□ 0.5
TUBD1-202ENST00000340993 BTG4Q9NY30 223 aa18.14■□□□□ 0.5
TUBD1-202ENST00000340993 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.5
TUBD1-202ENST00000340993 OVOS2A0A0J9YW53 1432 aa18.14■□□□□ 0.5
TUBD1-202ENST00000340993 OVOS2Q6IE36 1432 aa18.14■□□□□ 0.5
TUBD1-202ENST00000340993 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
TUBD1-202ENST00000340993 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
TUBD1-202ENST00000340993 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
TUBD1-202ENST00000340993 COL14A1Q05707 1796 aaKnown RBP18.13■□□□□ 0.49
TUBD1-202ENST00000340993 RRS1Q15050 365 aaKnown RBP18.12■□□□□ 0.49
TUBD1-202ENST00000340993 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
TUBD1-202ENST00000340993 NFAT5O94916 1531 aa18.12■□□□□ 0.49
TUBD1-202ENST00000340993 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
TUBD1-202ENST00000340993 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
TUBD1-202ENST00000340993 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
TUBD1-202ENST00000340993 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
TUBD1-202ENST00000340993 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
TUBD1-202ENST00000340993 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
TUBD1-202ENST00000340993 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
TUBD1-202ENST00000340993 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
TUBD1-202ENST00000340993 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
TUBD1-202ENST00000340993 USP35Q9P2H5 1018 aa18.09■□□□□ 0.49
TUBD1-202ENST00000340993 SLIT2O94813 1529 aa18.08■□□□□ 0.49
TUBD1-202ENST00000340993 FNBP4Q8N3X1 1017 aaPredicted RBP18.08■□□□□ 0.48
TUBD1-202ENST00000340993 AXIN2Q9Y2T1 843 aa18.08■□□□□ 0.48
TUBD1-202ENST00000340993 NRAPQ86VF7 1730 aa18.08■□□□□ 0.48
TUBD1-202ENST00000340993 MAP2P11137 1827 aaKnown RBP18.08■□□□□ 0.48
TUBD1-202ENST00000340993 EVA1CP58658 441 aa18.07■□□□□ 0.48
TUBD1-202ENST00000340993 UNC5CLQ8IV45 518 aa18.07■□□□□ 0.48
TUBD1-202ENST00000340993 LTV1Q96GA3 475 aaPredicted RBP18.07■□□□□ 0.48
TUBD1-202ENST00000340993 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
TUBD1-202ENST00000340993 CAMTA1Q9Y6Y1 1673 aa18.07■□□□□ 0.48
TUBD1-202ENST00000340993 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms