RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.53
TRERF1-201ENST00000340840 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
TRERF1-201ENST00000340840 ADGRL1O94910 1474 aa11.71□□□□□ -0.53
TRERF1-201ENST00000340840 MADDQ8WXG6 1647 aa11.71□□□□□ -0.53
TRERF1-201ENST00000340840 A0A0G2JS52 829 aa11.71□□□□□ -0.54
TRERF1-201ENST00000340840 CHD1LQ86WJ1 897 aa11.71□□□□□ -0.54
TRERF1-201ENST00000340840 GCC1Q96CN9 775 aa11.71□□□□□ -0.54
TRERF1-201ENST00000340840 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.54
TRERF1-201ENST00000340840 FANCAO15360 1455 aa11.71□□□□□ -0.54
TRERF1-201ENST00000340840 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRERF1-201ENST00000340840 ZNF428Q96B54 188 aa11.7□□□□□ -0.54
TRERF1-201ENST00000340840 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-201ENST00000340840 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
TRERF1-201ENST00000340840 API5Q9BZZ5 524 aaKnown RBP11.69□□□□□ -0.54
TRERF1-201ENST00000340840 IL16Q14005 1332 aa11.69□□□□□ -0.54
TRERF1-201ENST00000340840 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-201ENST00000340840 HSPA2P54652 639 aa11.69□□□□□ -0.54
TRERF1-201ENST00000340840 GNAI1P63096 354 aa11.69□□□□□ -0.54
TRERF1-201ENST00000340840 ANKRD36BQ8N2N9 1353 aa11.69□□□□□ -0.54
TRERF1-201ENST00000340840 ALDH1L2Q3SY69 923 aa11.68□□□□□ -0.54
TRERF1-201ENST00000340840 CDC45O75419 566 aa11.68□□□□□ -0.54
TRERF1-201ENST00000340840 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRERF1-201ENST00000340840 SMC5Q8IY18 1101 aa11.68□□□□□ -0.54
TRERF1-201ENST00000340840 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
TRERF1-201ENST00000340840 ABCC1P33527 1531 aa11.68□□□□□ -0.54
TRERF1-201ENST00000340840 RNF17Q9BXT8 1623 aaKnown RBP11.68□□□□□ -0.54
TRERF1-201ENST00000340840 MYOM2P54296 1465 aa11.67□□□□□ -0.54
TRERF1-201ENST00000340840 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
TRERF1-201ENST00000340840 ESPNB1AK53 854 aa11.67□□□□□ -0.54
TRERF1-201ENST00000340840 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
TRERF1-201ENST00000340840 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
TRERF1-201ENST00000340840 ST18O60284 1047 aa11.67□□□□□ -0.54
TRERF1-201ENST00000340840 NUCB2P80303 420 aa11.66□□□□□ -0.54
TRERF1-201ENST00000340840 FCHSD2O94868 740 aa11.66□□□□□ -0.54
TRERF1-201ENST00000340840 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
TRERF1-201ENST00000340840 SNX21Q969T3 373 aa11.66□□□□□ -0.54
TRERF1-201ENST00000340840 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
TRERF1-201ENST00000340840 NUCB1Q02818 461 aa11.65□□□□□ -0.54
TRERF1-201ENST00000340840 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
TRERF1-201ENST00000340840 APBB1O00213 710 aa11.65□□□□□ -0.54
TRERF1-201ENST00000340840 CLCN1P35523 988 aa11.65□□□□□ -0.54
TRERF1-201ENST00000340840 TNPO1Q92973 898 aaKnown RBP11.65□□□□□ -0.54
TRERF1-201ENST00000340840 PANK2Q9BZ23 570 aa11.65□□□□□ -0.54
TRERF1-201ENST00000340840 RRAGDQ9NQL2 400 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-201ENST00000340840 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
TRERF1-201ENST00000340840 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 CLTCL1P53675 1640 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 NASPP49321 788 aaPredicted RBP11.64□□□□□ -0.55
TRERF1-201ENST00000340840 ZBTB40Q9NUA8 1239 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 HMOX1P09601 288 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
TRERF1-201ENST00000340840 HMMRO75330 724 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 MCCP23508 829 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 RABEP1Q15276 862 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 UBE2Q2Q8WVN8 375 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
TRERF1-201ENST00000340840 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
TRERF1-201ENST00000340840 TET3O43151 1660 aa11.63□□□□□ -0.55
TRERF1-201ENST00000340840 SHROOM2Q13796 1616 aa11.63□□□□□ -0.55
TRERF1-201ENST00000340840 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
TRERF1-201ENST00000340840 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
TRERF1-201ENST00000340840 SPHKAPQ2M3C7 1700 aa11.62□□□□□ -0.55
TRERF1-201ENST00000340840 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
TRERF1-201ENST00000340840 SLC52A1Q9NWF4 448 aa11.62□□□□□ -0.55
TRERF1-201ENST00000340840 REC8O95072 547 aa11.62□□□□□ -0.55
TRERF1-201ENST00000340840 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-201ENST00000340840 RIMBP3CA6NJZ7 1639 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 RIMBP3BA6NNM3 1639 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 RIMBP3Q9UFD9 1639 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 TXNDC2Q86VQ3 553 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 THEMISQ8N1K5 641 aaPredicted RBP11.61□□□□□ -0.55
TRERF1-201ENST00000340840 MAP3K4Q9Y6R4 1608 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 ZFYVE16Q7Z3T8 1539 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 NUTM2FA1L443 756 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 MCTP1Q6DN14 999 aa11.61□□□□□ -0.55
TRERF1-201ENST00000340840 FSD2A1L4K1 749 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 UGGT1Q9NYU2 1555 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 FYB1O15117 783 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 COG3Q96JB2 828 aa11.6□□□□□ -0.55
TRERF1-201ENST00000340840 TPM2P07951 284 aa11.59□□□□□ -0.55
TRERF1-201ENST00000340840 ANKLE2Q86XL3 938 aa11.59□□□□□ -0.55
TRERF1-201ENST00000340840 ARHGAP45Q92619 1136 aa11.59□□□□□ -0.55
TRERF1-201ENST00000340840 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
TRERF1-201ENST00000340840 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
TRERF1-201ENST00000340840 RAB3GAP1Q15042 981 aa11.59□□□□□ -0.55
TRERF1-201ENST00000340840 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-201ENST00000340840 SYAP1Q96A49 352 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-201ENST00000340840 RRP9O43818 475 aaKnown RBP11.58□□□□□ -0.56
TRERF1-201ENST00000340840 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
TRERF1-201ENST00000340840 CEP152O94986 1710 aa11.58□□□□□ -0.56
TRERF1-201ENST00000340840 A0A1W2PP64 1363 aa11.58□□□□□ -0.56
TRERF1-201ENST00000340840 SSFA2P28290 1259 aa11.58□□□□□ -0.56
TRERF1-201ENST00000340840 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
TRERF1-201ENST00000340840 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
TRERF1-201ENST00000340840 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms