RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 TULP4Q9NRJ4 1543 aa26.14■■□□□ 1.78
CLPB-202ENST00000340729 NCOA3Q9Y6Q9 1424 aa26.14■■□□□ 1.78
CLPB-202ENST00000340729 ARHGEF28Q8N1W1 1705 aaKnown RBP26.14■■□□□ 1.78
CLPB-202ENST00000340729 IL16Q14005 1332 aa26.14■■□□□ 1.78
CLPB-202ENST00000340729 RRAGDQ9NQL2 400 aaPredicted RBP26.14■■□□□ 1.77
CLPB-202ENST00000340729 UBE2Q2Q8WVN8 375 aa26.13■■□□□ 1.77
CLPB-202ENST00000340729 ABCC11Q96J66 1382 aa26.13■■□□□ 1.77
CLPB-202ENST00000340729 XRCC6P12956 609 aaKnown RBP eCLIP26.13■■□□□ 1.77
CLPB-202ENST00000340729 EVC2Q86UK5 1308 aa26.12■■□□□ 1.77
CLPB-202ENST00000340729 MYO5BQ9ULV0 1848 aa26.12■■□□□ 1.77
CLPB-202ENST00000340729 U2AF1L5P0DN76 240 aaPredicted RBP26.12■■□□□ 1.77
CLPB-202ENST00000340729 U2AF1Q01081 240 aaKnown RBP eCLIP26.12■■□□□ 1.77
CLPB-202ENST00000340729 PREX1Q8TCU6 1659 aa26.12■■□□□ 1.77
CLPB-202ENST00000340729 TRIM27P14373 513 aa26.11■■□□□ 1.77
CLPB-202ENST00000340729 ISY1Q9ULR0 285 aaKnown RBP26.11■■□□□ 1.77
CLPB-202ENST00000340729 ARHGAP31Q2M1Z3 1444 aa26.1■■□□□ 1.77
CLPB-202ENST00000340729 COL3A1P02461 1466 aaPredicted RBP26.1■■□□□ 1.77
CLPB-202ENST00000340729 PLEKHF1Q96S99 279 aa26.1■■□□□ 1.77
CLPB-202ENST00000340729 SMC4Q9NTJ3 1288 aa26.1■■□□□ 1.77
CLPB-202ENST00000340729 EIF5BO60841 1220 aaKnown RBP26.09■■□□□ 1.77
CLPB-202ENST00000340729 ATF7IPQ6VMQ6 1270 aa26.09■■□□□ 1.77
CLPB-202ENST00000340729 DDX11L8A8MPP1 907 aa26.08■■□□□ 1.77
CLPB-202ENST00000340729 MFAP1P55081 439 aaKnown RBP26.08■■□□□ 1.77
CLPB-202ENST00000340729 ZNF692Q9BU19 519 aaPredicted RBP26.08■■□□□ 1.77
CLPB-202ENST00000340729 RBM25P49756 843 aaKnown RBP26.07■■□□□ 1.76
CLPB-202ENST00000340729 SNX21Q969T3 373 aa26.07■■□□□ 1.76
CLPB-202ENST00000340729 NEXMIFQ5QGS0 1516 aa26.07■■□□□ 1.76
CLPB-202ENST00000340729 TRAK2O60296 914 aa26.07■■□□□ 1.76
CLPB-202ENST00000340729 DDIT3P35638 169 aa26.07■■□□□ 1.76
CLPB-202ENST00000340729 HSCBQ8IWL3 235 aa26.07■■□□□ 1.76
CLPB-202ENST00000340729 ANKRD26Q9UPS8 1709 aa26.06■■□□□ 1.76
CLPB-202ENST00000340729 EXOSC9Q06265 439 aaKnown RBP26.06■■□□□ 1.76
CLPB-202ENST00000340729 MED14O60244 1454 aa26.06■■□□□ 1.76
CLPB-202ENST00000340729 TMPOP42166 694 aaKnown RBP26.05■■□□□ 1.76
CLPB-202ENST00000340729 MRE11P49959 708 aa26.05■■□□□ 1.76
CLPB-202ENST00000340729 SSH1Q8WYL5 1049 aa26.05■■□□□ 1.76
CLPB-202ENST00000340729 TRIM35Q9UPQ4 493 aa26.05■■□□□ 1.76
CLPB-202ENST00000340729 REREQ9P2R6 1566 aa26.04■■□□□ 1.76
CLPB-202ENST00000340729 TSR2Q969E8 191 aaKnown RBP26.04■■□□□ 1.76
CLPB-202ENST00000340729 ZBTB40Q9NUA8 1239 aa26.04■■□□□ 1.76
CLPB-202ENST00000340729 KIF16BQ96L93 1317 aa26.03■■□□□ 1.76
CLPB-202ENST00000340729 TMEM132EQ6IEE7 984 aa26.03■■□□□ 1.76
CLPB-202ENST00000340729 ITPRIPQ8IWB1 547 aa26.03■■□□□ 1.76
CLPB-202ENST00000340729 CLCN1P35523 988 aa26.02■■□□□ 1.76
CLPB-202ENST00000340729 CIZ1Q9ULV3 898 aaPredicted RBP26.02■■□□□ 1.76
CLPB-202ENST00000340729 IPO8O15397 1037 aaKnown RBP26■■□□□ 1.75
CLPB-202ENST00000340729 NUCB1Q02818 461 aa26■■□□□ 1.75
CLPB-202ENST00000340729 SPRYD3Q8NCJ5 442 aa26■■□□□ 1.75
CLPB-202ENST00000340729 ALDH1L2Q3SY69 923 aa25.99■■□□□ 1.75
CLPB-202ENST00000340729 NOB1Q9ULX3 412 aaKnown RBP25.99■■□□□ 1.75
CLPB-202ENST00000340729 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
CLPB-202ENST00000340729 TMEM131LA2VDJ0 1609 aa25.98■■□□□ 1.75
CLPB-202ENST00000340729 A0A1W2PP64 1363 aa25.98■■□□□ 1.75
CLPB-202ENST00000340729 BRPF1P55201 1214 aaPredicted RBP25.97■■□□□ 1.75
CLPB-202ENST00000340729 TMEM57Q8N5G2 664 aa25.97■■□□□ 1.75
CLPB-202ENST00000340729 AGLP35573 1532 aa25.97■■□□□ 1.75
CLPB-202ENST00000340729 VGFO15240 615 aaPredicted RBP25.96■■□□□ 1.75
CLPB-202ENST00000340729 NUTM2DQ5VT03 806 aaPredicted RBP25.96■■□□□ 1.75
CLPB-202ENST00000340729 ZNF428Q96B54 188 aa25.96■■□□□ 1.75
CLPB-202ENST00000340729 PNNQ9H307 717 aaKnown RBP25.96■■□□□ 1.75
CLPB-202ENST00000340729 CDC42BPGQ6DT37 1551 aa25.96■■□□□ 1.75
CLPB-202ENST00000340729 PTMSP20962 102 aa25.95■■□□□ 1.75
CLPB-202ENST00000340729 IDI1Q13907 227 aa25.95■■□□□ 1.75
CLPB-202ENST00000340729 PANK2Q9BZ23 570 aa25.95■■□□□ 1.75
CLPB-202ENST00000340729 ZFYVE9O95405 1425 aa25.95■■□□□ 1.74
CLPB-202ENST00000340729 GZF1Q9H116 711 aaPredicted RBP25.95■■□□□ 1.74
CLPB-202ENST00000340729 ARHGEF40Q8TER5 1519 aa25.94■■□□□ 1.74
CLPB-202ENST00000340729 PNPLA6Q8IY17 1366 aa25.94■■□□□ 1.74
CLPB-202ENST00000340729 PPIP5K1Q6PFW1 1433 aa25.94■■□□□ 1.74
CLPB-202ENST00000340729 BMP2KLQ5H9B9 411 aa25.94■■□□□ 1.74
CLPB-202ENST00000340729 GRPEL1Q9HAV7 217 aa25.93■■□□□ 1.74
CLPB-202ENST00000340729 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
CLPB-202ENST00000340729 U2SURPO15042 1029 aaKnown RBP25.92■■□□□ 1.74
CLPB-202ENST00000340729 CHD1LQ86WJ1 897 aa25.91■■□□□ 1.74
CLPB-202ENST00000340729 CABP2Q9NPB3 220 aa25.91■■□□□ 1.74
CLPB-202ENST00000340729 CHMP4BQ9H444 224 aaKnown RBP25.91■■□□□ 1.74
CLPB-202ENST00000340729 SKOR2Q2VWA4 1001 aaPredicted RBP25.9■■□□□ 1.74
CLPB-202ENST00000340729 GBP4Q96PP9 640 aa25.9■■□□□ 1.74
CLPB-202ENST00000340729 RIPK4P57078 832 aa25.89■■□□□ 1.74
CLPB-202ENST00000340729 RAB3GAP1Q15042 981 aa25.89■■□□□ 1.74
CLPB-202ENST00000340729 PIK3R4Q99570 1358 aa25.89■■□□□ 1.74
CLPB-202ENST00000340729 FBXO31Q5XUX0 539 aaPredicted RBP25.89■■□□□ 1.73
CLPB-202ENST00000340729 SLC52A1Q9NWF4 448 aa25.88■■□□□ 1.73
CLPB-202ENST00000340729 TNPO1Q92973 898 aaKnown RBP25.87■■□□□ 1.73
CLPB-202ENST00000340729 GCC1Q96CN9 775 aa25.87■■□□□ 1.73
CLPB-202ENST00000340729 CD163L1Q9NR16 1453 aa25.87■■□□□ 1.73
CLPB-202ENST00000340729 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
CLPB-202ENST00000340729 FYB1O15117 783 aa25.86■■□□□ 1.73
CLPB-202ENST00000340729 DIAPH1O60610 1272 aaKnown RBP25.85■■□□□ 1.73
CLPB-202ENST00000340729 ARHGAP45Q92619 1136 aa25.85■■□□□ 1.73
CLPB-202ENST00000340729 ARXQ96QS3 562 aa25.85■■□□□ 1.73
CLPB-202ENST00000340729 LNPKQ9C0E8 428 aa25.85■■□□□ 1.73
CLPB-202ENST00000340729 GGNBP2Q9H3C7 697 aa25.85■■□□□ 1.73
CLPB-202ENST00000340729 PTCH1Q13635 1447 aa25.85■■□□□ 1.73
CLPB-202ENST00000340729 KIF2CQ99661 725 aa25.84■■□□□ 1.73
CLPB-202ENST00000340729 PTPRMP28827 1452 aa25.84■■□□□ 1.73
CLPB-202ENST00000340729 FCHSD2O94868 740 aa25.84■■□□□ 1.73
CLPB-202ENST00000340729 HSP90AB1P08238 724 aaKnown RBP25.84■■□□□ 1.73
CLPB-202ENST00000340729 KIF20BQ96Q89 1820 aa25.83■■□□□ 1.72
CLPB-202ENST00000340729 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms