RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
C2orf88-201ENST00000340623 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
C2orf88-201ENST00000340623 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
C2orf88-201ENST00000340623 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
C2orf88-201ENST00000340623 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
C2orf88-201ENST00000340623 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
C2orf88-201ENST00000340623 ELL2O00472 640 aaPredicted RBP15.16■□□□□ 0.02
C2orf88-201ENST00000340623 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
C2orf88-201ENST00000340623 FTSJ3Q8IY81 847 aaKnown RBP15.16■□□□□ 0.02
C2orf88-201ENST00000340623 RCAN3Q9UKA8 241 aa15.15■□□□□ 0.02
C2orf88-201ENST00000340623 MADDQ8WXG6 1647 aa15.15■□□□□ 0.02
C2orf88-201ENST00000340623 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
C2orf88-201ENST00000340623 UBAP1LF5GYI3 381 aa15.15■□□□□ 0.02
C2orf88-201ENST00000340623 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
C2orf88-201ENST00000340623 ZNF335Q9H4Z2 1342 aaPredicted RBP15.15■□□□□ 0.02
C2orf88-201ENST00000340623 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
C2orf88-201ENST00000340623 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
C2orf88-201ENST00000340623 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 ASXL1Q8IXJ9 1541 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 KDM4FA0A1W2PPD8 638 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 MSH5O43196 834 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 SPATA31D1Q6ZQQ2 1576 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
C2orf88-201ENST00000340623 MEX3CQ5U5Q3 659 aaKnown RBP15.14■□□□□ 0.01
C2orf88-201ENST00000340623 NEXMIFQ5QGS0 1516 aa15.13■□□□□ 0.01
C2orf88-201ENST00000340623 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
C2orf88-201ENST00000340623 NSD2O96028 1365 aa15.12■□□□□ 0.01
C2orf88-201ENST00000340623 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
C2orf88-201ENST00000340623 LMTK3Q96Q04 1460 aa15.12■□□□□ 0.01
C2orf88-201ENST00000340623 CDCA7LQ96GN5 454 aa15.11■□□□□ 0.01
C2orf88-201ENST00000340623 BCL2L13Q9BXK5 485 aa15.11■□□□□ 0.01
C2orf88-201ENST00000340623 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
C2orf88-201ENST00000340623 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 TEFQ10587 303 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 CHRNA2Q15822 529 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 PRR36Q9H6K5 1346 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 TOM1O60784 492 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 TOM1L2Q6ZVM7 507 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 USHBP1Q8N6Y0 703 aa15.1■□□□□ 0.01
C2orf88-201ENST00000340623 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
C2orf88-201ENST00000340623 SETD1BQ9UPS6 1966 aaKnown RBP15.09■□□□□ 0.01
C2orf88-201ENST00000340623 E9PSI1 815 aa15.09■□□□□ 0.01
C2orf88-201ENST00000340623 PLEKHG3A1L390 1219 aa15.08■□□□□ 0.01
C2orf88-201ENST00000340623 NBR1Q14596 966 aa15.08■□□□□ 0.01
C2orf88-201ENST00000340623 SLAIN2Q9P270 581 aa15.08■□□□□ 0.01
C2orf88-201ENST00000340623 PIK3R4Q99570 1358 aa15.08■□□□□ 0
C2orf88-201ENST00000340623 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
C2orf88-201ENST00000340623 POLKQ9UBT6 870 aa15.08■□□□□ 0
C2orf88-201ENST00000340623 SMG6Q86US8 1419 aaKnown RBP15.08■□□□□ 0
C2orf88-201ENST00000340623 FAM135BQ49AJ0 1406 aa15.07■□□□□ 0
C2orf88-201ENST00000340623 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
C2orf88-201ENST00000340623 ZNF330Q9Y3S2 320 aaPredicted RBP15.07■□□□□ 0
C2orf88-201ENST00000340623 MROH2AA6NES4 1674 aa15.07■□□□□ 0
C2orf88-201ENST00000340623 ADAMTS13Q76LX8 1427 aa15.06■□□□□ 0
C2orf88-201ENST00000340623 CEP170BQ9Y4F5 1589 aaPredicted RBP15.06■□□□□ 0
C2orf88-201ENST00000340623 CLUAP1Q96AJ1 413 aa15.06■□□□□ 0
C2orf88-201ENST00000340623 TMEM131LA2VDJ0 1609 aa15.06■□□□□ 0
C2orf88-201ENST00000340623 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
C2orf88-201ENST00000340623 FCHSD2O94868 740 aa15.05■□□□□ -0
C2orf88-201ENST00000340623 ANP32AP39687 249 aaKnown RBP15.05■□□□□ -0
C2orf88-201ENST00000340623 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
C2orf88-201ENST00000340623 NGEFQ8N5V2 710 aa15.05■□□□□ -0
C2orf88-201ENST00000340623 SYTL4Q96C24 671 aaPredicted RBP15.05■□□□□ -0
C2orf88-201ENST00000340623 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ -0
C2orf88-201ENST00000340623 EDC4Q6P2E9 1401 aaKnown RBP15.04■□□□□ -0
C2orf88-201ENST00000340623 PLIN1O60240 522 aa15.04■□□□□ -0
C2orf88-201ENST00000340623 GCP02774 474 aa15.04■□□□□ -0
C2orf88-201ENST00000340623 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
C2orf88-201ENST00000340623 TATP17735 454 aaPredicted RBP15.03■□□□□ -0
C2orf88-201ENST00000340623 BCORL1Q5H9F3 1711 aa15.03■□□□□ -0
C2orf88-201ENST00000340623 PLEKHO1Q53GL0 409 aaPredicted RBP15.03■□□□□ -0
C2orf88-201ENST00000340623 ZNF530Q6P9A1 599 aaPredicted RBP15.03■□□□□ -0
C2orf88-201ENST00000340623 NECTIN2Q92692 538 aa15.03■□□□□ -0
C2orf88-201ENST00000340623 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
C2orf88-201ENST00000340623 STK31Q9BXU1 1019 aa15.02■□□□□ -0
C2orf88-201ENST00000340623 MAP3K19Q56UN5 1328 aa15.02■□□□□ -0
C2orf88-201ENST00000340623 TMPOP42166 694 aaKnown RBP15.01□□□□□ -0.01
C2orf88-201ENST00000340623 TSPYL4Q9UJ04 414 aa15.01□□□□□ -0.01
C2orf88-201ENST00000340623 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
C2orf88-201ENST00000340623 TSR2Q969E8 191 aaKnown RBP15.01□□□□□ -0.01
C2orf88-201ENST00000340623 SIGLEC1Q9BZZ2 1709 aa15.01□□□□□ -0.01
C2orf88-201ENST00000340623 DEKP35659 375 aaKnown RBP15□□□□□ -0.01
C2orf88-201ENST00000340623 DCTN1Q14203 1278 aa15□□□□□ -0.01
C2orf88-201ENST00000340623 GNAI1P63096 354 aa15□□□□□ -0.01
C2orf88-201ENST00000340623 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
C2orf88-201ENST00000340623 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
C2orf88-201ENST00000340623 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
C2orf88-201ENST00000340623 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
C2orf88-201ENST00000340623 ANKRD24Q8TF21 1146 aa15□□□□□ -0.01
C2orf88-201ENST00000340623 NRXN1Q9ULB1 1477 aa14.99□□□□□ -0.01
C2orf88-201ENST00000340623 MS4A1P11836 297 aa14.99□□□□□ -0.01
C2orf88-201ENST00000340623 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
C2orf88-201ENST00000340623 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
C2orf88-201ENST00000340623 NFE2L2Q16236 605 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms