RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
SIRPB3P-201ENST00000340424 HAP1P54257 671 aaPredicted RBP19.01■□□□□ 0.63
SIRPB3P-201ENST00000340424 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
SIRPB3P-201ENST00000340424 LMOD2Q6P5Q4 547 aa19.01■□□□□ 0.63
SIRPB3P-201ENST00000340424 TNKS1BP1Q9C0C2 1729 aaKnown RBP19■□□□□ 0.63
SIRPB3P-201ENST00000340424 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
SIRPB3P-201ENST00000340424 ATRNO75882 1429 aa19■□□□□ 0.63
SIRPB3P-201ENST00000340424 EVC2Q86UK5 1308 aa19■□□□□ 0.63
SIRPB3P-201ENST00000340424 SLIT2O94813 1529 aa18.99■□□□□ 0.63
SIRPB3P-201ENST00000340424 BCL9LQ86UU0 1499 aa18.98■□□□□ 0.63
SIRPB3P-201ENST00000340424 SBNO2Q9Y2G9 1366 aa18.98■□□□□ 0.63
SIRPB3P-201ENST00000340424 ACEP12821 1306 aa18.98■□□□□ 0.63
SIRPB3P-201ENST00000340424 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
SIRPB3P-201ENST00000340424 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
SIRPB3P-201ENST00000340424 PPIP5K1Q6PFW1 1433 aa18.97■□□□□ 0.63
SIRPB3P-201ENST00000340424 PAK3O75914 559 aaPredicted RBP18.96■□□□□ 0.63
SIRPB3P-201ENST00000340424 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
SIRPB3P-201ENST00000340424 NWD2Q9ULI1 1742 aa18.96■□□□□ 0.63
SIRPB3P-201ENST00000340424 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
SIRPB3P-201ENST00000340424 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
SIRPB3P-201ENST00000340424 RGS12O14924 1447 aa18.94■□□□□ 0.62
SIRPB3P-201ENST00000340424 CABLES1Q8TDN4 633 aa18.94■□□□□ 0.62
SIRPB3P-201ENST00000340424 CRYBG1Q9Y4K1 1723 aa18.94■□□□□ 0.62
SIRPB3P-201ENST00000340424 PLCH1Q4KWH8 1693 aa18.92■□□□□ 0.62
SIRPB3P-201ENST00000340424 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
SIRPB3P-201ENST00000340424 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
SIRPB3P-201ENST00000340424 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
SIRPB3P-201ENST00000340424 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
SIRPB3P-201ENST00000340424 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
SIRPB3P-201ENST00000340424 SLC24A1O60721 1099 aa18.89■□□□□ 0.61
SIRPB3P-201ENST00000340424 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
SIRPB3P-201ENST00000340424 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
SIRPB3P-201ENST00000340424 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.61
SIRPB3P-201ENST00000340424 VPS72Q15906 364 aa18.88■□□□□ 0.61
SIRPB3P-201ENST00000340424 USP6P35125 1406 aa18.88■□□□□ 0.61
SIRPB3P-201ENST00000340424 FAM83GA6ND36 823 aa18.87■□□□□ 0.61
SIRPB3P-201ENST00000340424 PLEKHG5O94827 1062 aa18.87■□□□□ 0.61
SIRPB3P-201ENST00000340424 ABTB2Q8N961 1025 aa18.87■□□□□ 0.61
SIRPB3P-201ENST00000340424 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
SIRPB3P-201ENST00000340424 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
SIRPB3P-201ENST00000340424 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
SIRPB3P-201ENST00000340424 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
SIRPB3P-201ENST00000340424 PRDM11Q9NQV5 511 aa18.85■□□□□ 0.61
SIRPB3P-201ENST00000340424 NRAPQ86VF7 1730 aa18.85■□□□□ 0.61
SIRPB3P-201ENST00000340424 GLI3P10071 1580 aa18.85■□□□□ 0.61
SIRPB3P-201ENST00000340424 USP19O94966 1318 aa18.84■□□□□ 0.61
SIRPB3P-201ENST00000340424 SSH2Q76I76 1423 aa18.83■□□□□ 0.61
SIRPB3P-201ENST00000340424 ZBTB22O15209 634 aa18.83■□□□□ 0.6
SIRPB3P-201ENST00000340424 UPF1Q92900 1129 aaKnown RBP eCLIP18.83■□□□□ 0.6
SIRPB3P-201ENST00000340424 BTG4Q9NY30 223 aa18.83■□□□□ 0.6
SIRPB3P-201ENST00000340424 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.6
SIRPB3P-201ENST00000340424 AKAP12Q02952 1782 aa18.83■□□□□ 0.6
SIRPB3P-201ENST00000340424 CPDO75976 1380 aa18.82■□□□□ 0.6
SIRPB3P-201ENST00000340424 CPSF1Q10570 1443 aaKnown RBP18.82■□□□□ 0.6
SIRPB3P-201ENST00000340424 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
SIRPB3P-201ENST00000340424 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
SIRPB3P-201ENST00000340424 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
SIRPB3P-201ENST00000340424 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
SIRPB3P-201ENST00000340424 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
SIRPB3P-201ENST00000340424 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
SIRPB3P-201ENST00000340424 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
SIRPB3P-201ENST00000340424 EP400Q96L91 3159 aa18.79■□□□□ 0.6
SIRPB3P-201ENST00000340424 MON2Q7Z3U7 1717 aa18.78■□□□□ 0.6
SIRPB3P-201ENST00000340424 GCP02774 474 aa18.78■□□□□ 0.6
SIRPB3P-201ENST00000340424 PIK3C2AO00443 1686 aa18.78■□□□□ 0.6
SIRPB3P-201ENST00000340424 SLIT3O75094 1523 aa18.78■□□□□ 0.6
SIRPB3P-201ENST00000340424 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
SIRPB3P-201ENST00000340424 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
SIRPB3P-201ENST00000340424 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
SIRPB3P-201ENST00000340424 NLRP6P59044 892 aa18.77■□□□□ 0.6
SIRPB3P-201ENST00000340424 TESK2Q96S53 571 aa18.77■□□□□ 0.6
SIRPB3P-201ENST00000340424 USP47Q96K76 1375 aa18.77■□□□□ 0.6
SIRPB3P-201ENST00000340424 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
SIRPB3P-201ENST00000340424 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
SIRPB3P-201ENST00000340424 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
SIRPB3P-201ENST00000340424 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
SIRPB3P-201ENST00000340424 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
SIRPB3P-201ENST00000340424 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
SIRPB3P-201ENST00000340424 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
SIRPB3P-201ENST00000340424 KCNH5Q8NCM2 988 aa18.74■□□□□ 0.59
SIRPB3P-201ENST00000340424 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
SIRPB3P-201ENST00000340424 CD163L1Q9NR16 1453 aa18.73■□□□□ 0.59
SIRPB3P-201ENST00000340424 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
SIRPB3P-201ENST00000340424 CCDC125Q86Z20 511 aa18.73■□□□□ 0.59
SIRPB3P-201ENST00000340424 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
SIRPB3P-201ENST00000340424 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
SIRPB3P-201ENST00000340424 USP54Q70EL1 1684 aa18.72■□□□□ 0.59
SIRPB3P-201ENST00000340424 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
SIRPB3P-201ENST00000340424 TMF1P82094 1093 aa18.71■□□□□ 0.59
SIRPB3P-201ENST00000340424 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
SIRPB3P-201ENST00000340424 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
SIRPB3P-201ENST00000340424 USP31Q70CQ4 1352 aa18.7■□□□□ 0.58
SIRPB3P-201ENST00000340424 CAMTA1Q9Y6Y1 1673 aa18.7■□□□□ 0.58
SIRPB3P-201ENST00000340424 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
SIRPB3P-201ENST00000340424 EVA1CP58658 441 aa18.7■□□□□ 0.58
SIRPB3P-201ENST00000340424 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
SIRPB3P-201ENST00000340424 SLC12A5Q9H2X9 1139 aa18.7■□□□□ 0.58
SIRPB3P-201ENST00000340424 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
SIRPB3P-201ENST00000340424 STRN4Q9NRL3 753 aa18.69■□□□□ 0.58
SIRPB3P-201ENST00000340424 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms