RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 USP6P35125 1406 aa21.38■■□□□ 1.01
UBE3B-201ENST00000340074 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
UBE3B-201ENST00000340074 CABLES1Q8TDN4 633 aa21.38■■□□□ 1.01
UBE3B-201ENST00000340074 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
UBE3B-201ENST00000340074 RGS17Q9UGC6 210 aaPredicted RBP21.37■■□□□ 1.01
UBE3B-201ENST00000340074 NRKQ7Z2Y5 1582 aa21.36■■□□□ 1.01
UBE3B-201ENST00000340074 CPSF1Q10570 1443 aaKnown RBP21.36■■□□□ 1.01
UBE3B-201ENST00000340074 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
UBE3B-201ENST00000340074 C8orf37Q96NL8 207 aa21.35■■□□□ 1.01
UBE3B-201ENST00000340074 ZNF692Q9BU19 519 aaPredicted RBP21.35■■□□□ 1.01
UBE3B-201ENST00000340074 SLC12A5Q9H2X9 1139 aa21.35■■□□□ 1.01
UBE3B-201ENST00000340074 CD163L1Q9NR16 1453 aa21.35■■□□□ 1.01
UBE3B-201ENST00000340074 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
UBE3B-201ENST00000340074 PIK3C2AO00443 1686 aa21.33■■□□□ 1.01
UBE3B-201ENST00000340074 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1.01
UBE3B-201ENST00000340074 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
UBE3B-201ENST00000340074 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
UBE3B-201ENST00000340074 SSH2Q76I76 1423 aa21.33■■□□□ 1
UBE3B-201ENST00000340074 KTN1Q86UP2 1357 aaKnown RBP21.32■■□□□ 1
UBE3B-201ENST00000340074 ABTB2Q8N961 1025 aa21.32■■□□□ 1
UBE3B-201ENST00000340074 MYOM1P52179 1685 aa21.32■■□□□ 1
UBE3B-201ENST00000340074 AFF2P51816 1311 aa21.31■■□□□ 1
UBE3B-201ENST00000340074 CDCA8Q53HL2 280 aa21.3■■□□□ 1
UBE3B-201ENST00000340074 NGLY1Q96IV0 654 aa21.3■■□□□ 1
UBE3B-201ENST00000340074 NINLQ9Y2I6 1382 aa21.3■■□□□ 1
UBE3B-201ENST00000340074 A0A1W2PP64 1363 aa21.29■■□□□ 1
UBE3B-201ENST00000340074 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
UBE3B-201ENST00000340074 TERF2IPQ9NYB0 399 aa21.29■■□□□ 1
UBE3B-201ENST00000340074 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
UBE3B-201ENST00000340074 TTC21BQ7Z4L5 1316 aa21.28■■□□□ 1
UBE3B-201ENST00000340074 ZNF772Q68DY9 489 aaPredicted RBP21.27■■□□□ 1
UBE3B-201ENST00000340074 POTEAQ6S8J7 498 aa21.27■■□□□ 1
UBE3B-201ENST00000340074 ILDR2Q71H61 639 aa21.27■■□□□ 1
UBE3B-201ENST00000340074 NLRP13Q86W25 1043 aa21.25■□□□□ 0.99
UBE3B-201ENST00000340074 TTC21AQ8NDW8 1320 aa21.25■□□□□ 0.99
UBE3B-201ENST00000340074 NWD2Q9ULI1 1742 aa21.25■□□□□ 0.99
UBE3B-201ENST00000340074 NLRP6P59044 892 aa21.24■□□□□ 0.99
UBE3B-201ENST00000340074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.24■□□□□ 0.99
UBE3B-201ENST00000340074 FNBP4Q8N3X1 1017 aaPredicted RBP21.24■□□□□ 0.99
UBE3B-201ENST00000340074 ANKRD36BQ8N2N9 1353 aa21.24■□□□□ 0.99
UBE3B-201ENST00000340074 EDC4Q6P2E9 1401 aaKnown RBP21.24■□□□□ 0.99
UBE3B-201ENST00000340074 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
UBE3B-201ENST00000340074 COL14A1Q05707 1796 aaKnown RBP21.23■□□□□ 0.99
UBE3B-201ENST00000340074 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
UBE3B-201ENST00000340074 USP21Q9UK80 565 aa21.23■□□□□ 0.99
UBE3B-201ENST00000340074 USP19O94966 1318 aa21.23■□□□□ 0.99
UBE3B-201ENST00000340074 USP54Q70EL1 1684 aa21.22■□□□□ 0.99
UBE3B-201ENST00000340074 SLIT2O94813 1529 aa21.21■□□□□ 0.99
UBE3B-201ENST00000340074 BCL9LQ86UU0 1499 aa21.21■□□□□ 0.99
UBE3B-201ENST00000340074 SLIT3O75094 1523 aa21.21■□□□□ 0.99
UBE3B-201ENST00000340074 FAM83GA6ND36 823 aa21.21■□□□□ 0.99
UBE3B-201ENST00000340074 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
UBE3B-201ENST00000340074 NRAPQ86VF7 1730 aa21.2■□□□□ 0.98
UBE3B-201ENST00000340074 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
UBE3B-201ENST00000340074 ZC3H6P61129 1189 aaKnown RBP21.19■□□□□ 0.98
UBE3B-201ENST00000340074 NME9Q86XW9 330 aa21.19■□□□□ 0.98
UBE3B-201ENST00000340074 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
UBE3B-201ENST00000340074 GCP02774 474 aa21.18■□□□□ 0.98
UBE3B-201ENST00000340074 QTRT2Q9H974 415 aaKnown RBP21.18■□□□□ 0.98
UBE3B-201ENST00000340074 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
UBE3B-201ENST00000340074 PRDM11Q9NQV5 511 aa21.17■□□□□ 0.98
UBE3B-201ENST00000340074 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
UBE3B-201ENST00000340074 CHRNA2Q15822 529 aa21.15■□□□□ 0.98
UBE3B-201ENST00000340074 UNC5CLQ8IV45 518 aa21.15■□□□□ 0.98
UBE3B-201ENST00000340074 ATRNO75882 1429 aa21.15■□□□□ 0.98
UBE3B-201ENST00000340074 LTN1O94822 1766 aa21.14■□□□□ 0.98
UBE3B-201ENST00000340074 BTG4Q9NY30 223 aa21.14■□□□□ 0.98
UBE3B-201ENST00000340074 TRPC5Q9UL62 973 aaPredicted RBP21.14■□□□□ 0.98
UBE3B-201ENST00000340074 CPDO75976 1380 aa21.14■□□□□ 0.97
UBE3B-201ENST00000340074 RGPD5Q99666 1765 aa21.14■□□□□ 0.97
UBE3B-201ENST00000340074 RXRBP28702 533 aa21.13■□□□□ 0.97
UBE3B-201ENST00000340074 LMO7Q8WWI1 1683 aa21.13■□□□□ 0.97
UBE3B-201ENST00000340074 NFAT5O94916 1531 aa21.13■□□□□ 0.97
UBE3B-201ENST00000340074 SOX12O15370 315 aa21.12■□□□□ 0.97
UBE3B-201ENST00000340074 CARD14Q9BXL6 1004 aa21.12■□□□□ 0.97
UBE3B-201ENST00000340074 KIF7Q2M1P5 1343 aa21.12■□□□□ 0.97
UBE3B-201ENST00000340074 COL18A1P39060 1754 aa21.12■□□□□ 0.97
UBE3B-201ENST00000340074 RBM6P78332 1123 aaKnown RBP21.12■□□□□ 0.97
UBE3B-201ENST00000340074 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
UBE3B-201ENST00000340074 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
UBE3B-201ENST00000340074 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
UBE3B-201ENST00000340074 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
UBE3B-201ENST00000340074 ZBTB7CA1YPR0 619 aa21.1■□□□□ 0.97
UBE3B-201ENST00000340074 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
UBE3B-201ENST00000340074 GLI3P10071 1580 aa21.09■□□□□ 0.97
UBE3B-201ENST00000340074 FYB1O15117 783 aa21.08■□□□□ 0.97
UBE3B-201ENST00000340074 GJD4Q96KN9 370 aaPredicted RBP21.08■□□□□ 0.97
UBE3B-201ENST00000340074 VPS72Q15906 364 aa21.07■□□□□ 0.96
UBE3B-201ENST00000340074 COG3Q96JB2 828 aa21.07■□□□□ 0.96
UBE3B-201ENST00000340074 PANK3Q9H999 370 aa21.07■□□□□ 0.96
UBE3B-201ENST00000340074 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
UBE3B-201ENST00000340074 ARHGEF25Q86VW2 580 aa21.06■□□□□ 0.96
UBE3B-201ENST00000340074 GGNBP2Q9H3C7 697 aa21.06■□□□□ 0.96
UBE3B-201ENST00000340074 CCDC9Q9Y3X0 531 aaKnown RBP21.06■□□□□ 0.96
UBE3B-201ENST00000340074 AATKQ6ZMQ8 1374 aa21.06■□□□□ 0.96
UBE3B-201ENST00000340074 ANKRD26Q9UPS8 1709 aa21.05■□□□□ 0.96
UBE3B-201ENST00000340074 RGS12O14924 1447 aa21.05■□□□□ 0.96
UBE3B-201ENST00000340074 STRN4Q9NRL3 753 aa21.04■□□□□ 0.96
UBE3B-201ENST00000340074 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
UBE3B-201ENST00000340074 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms