RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 KIAA0556O60303 1618 aa18.06■□□□□ 0.48
RET-201ENST00000340058 TNNQ9UQP3 1299 aa18.06■□□□□ 0.48
RET-201ENST00000340058 ANKLE2Q86XL3 938 aa18.05■□□□□ 0.48
RET-201ENST00000340058 ARID3AQ99856 593 aa18.05■□□□□ 0.48
RET-201ENST00000340058 WASLO00401 505 aaPredicted RBP18.05■□□□□ 0.48
RET-201ENST00000340058 SCAF11Q99590 1463 aaKnown RBP18.05■□□□□ 0.48
RET-201ENST00000340058 KDM5BQ9UGL1 1544 aa18.05■□□□□ 0.48
RET-201ENST00000340058 DRC7Q8IY82 874 aa18.05■□□□□ 0.48
RET-201ENST00000340058 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
RET-201ENST00000340058 REC8O95072 547 aa18.04■□□□□ 0.48
RET-201ENST00000340058 G3BP1Q13283 466 aaKnown RBP eCLIP18.04■□□□□ 0.48
RET-201ENST00000340058 F6X3S4 739 aa18.04■□□□□ 0.48
RET-201ENST00000340058 DDX54Q8TDD1 881 aaKnown RBP18.04■□□□□ 0.48
RET-201ENST00000340058 NEUROD6Q96NK8 337 aa18.04■□□□□ 0.48
RET-201ENST00000340058 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
RET-201ENST00000340058 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
RET-201ENST00000340058 DENND4BO75064 1496 aaPredicted RBP18.03■□□□□ 0.48
RET-201ENST00000340058 PZPP20742 1482 aa18.03■□□□□ 0.48
RET-201ENST00000340058 FYB1O15117 783 aa18.03■□□□□ 0.48
RET-201ENST00000340058 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
RET-201ENST00000340058 IL1RAPL2Q9NP60 686 aa18.03■□□□□ 0.48
RET-201ENST00000340058 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
RET-201ENST00000340058 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
RET-201ENST00000340058 MYL6BP14649 208 aa18.02■□□□□ 0.48
RET-201ENST00000340058 FOSBP53539 338 aa18.02■□□□□ 0.47
RET-201ENST00000340058 SIL1Q9H173 461 aa18.02■□□□□ 0.47
RET-201ENST00000340058 TCOF1Q13428 1488 aaKnown RBP18.02■□□□□ 0.47
RET-201ENST00000340058 MSNP26038 577 aaKnown RBP18.01■□□□□ 0.47
RET-201ENST00000340058 EXOC6BQ9Y2D4 811 aa18.01■□□□□ 0.47
RET-201ENST00000340058 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
RET-201ENST00000340058 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
RET-201ENST00000340058 FAM135AQ9P2D6 1515 aa18■□□□□ 0.47
RET-201ENST00000340058 INTS3Q68E01 1043 aaKnown RBP18■□□□□ 0.47
RET-201ENST00000340058 CHMP5Q9NZZ3 219 aa18■□□□□ 0.47
RET-201ENST00000340058 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
RET-201ENST00000340058 IGHDP01880 384 aa18■□□□□ 0.47
RET-201ENST00000340058 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
RET-201ENST00000340058 TRIM27P14373 513 aa17.99■□□□□ 0.47
RET-201ENST00000340058 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
RET-201ENST00000340058 SMARCA5O60264 1052 aaPredicted RBP17.99■□□□□ 0.47
RET-201ENST00000340058 CDC45O75419 566 aa17.99■□□□□ 0.47
RET-201ENST00000340058 GNAI3P08754 354 aa17.97■□□□□ 0.47
RET-201ENST00000340058 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
RET-201ENST00000340058 CHD1LQ86WJ1 897 aa17.97■□□□□ 0.47
RET-201ENST00000340058 RALGAPBQ86X10 1494 aa17.97■□□□□ 0.47
RET-201ENST00000340058 GNAI2P04899 355 aa17.96■□□□□ 0.47
RET-201ENST00000340058 NEK4P51957 841 aa17.96■□□□□ 0.47
RET-201ENST00000340058 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
RET-201ENST00000340058 APPP05067 770 aa17.96■□□□□ 0.47
RET-201ENST00000340058 VPS37CA5D8V6 355 aaPredicted RBP17.96■□□□□ 0.46
RET-201ENST00000340058 MCTP1Q6DN14 999 aa17.96■□□□□ 0.46
RET-201ENST00000340058 ANXA1P04083 346 aa17.95■□□□□ 0.46
RET-201ENST00000340058 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
RET-201ENST00000340058 CCDC85AQ96PX6 553 aaPredicted RBP17.95■□□□□ 0.46
RET-201ENST00000340058 NUP160Q12769 1436 aa17.95■□□□□ 0.46
RET-201ENST00000340058 ACEP12821 1306 aa17.95■□□□□ 0.46
RET-201ENST00000340058 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
RET-201ENST00000340058 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
RET-201ENST00000340058 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
RET-201ENST00000340058 A2MP01023 1474 aa17.94■□□□□ 0.46
RET-201ENST00000340058 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
RET-201ENST00000340058 CFAP43Q8NDM7 1665 aa17.94■□□□□ 0.46
RET-201ENST00000340058 DDX11L8A8MPP1 907 aa17.93■□□□□ 0.46
RET-201ENST00000340058 KDM4AO75164 1064 aa17.93■□□□□ 0.46
RET-201ENST00000340058 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
RET-201ENST00000340058 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
RET-201ENST00000340058 SRGAP3O43295 1099 aa17.93■□□□□ 0.46
RET-201ENST00000340058 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
RET-201ENST00000340058 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
RET-201ENST00000340058 PCDHB15Q9Y5E8 787 aa17.92■□□□□ 0.46
RET-201ENST00000340058 SRCIN1Q9C0H9 1055 aa17.92■□□□□ 0.46
RET-201ENST00000340058 PHF8Q9UPP1 1060 aa17.92■□□□□ 0.46
RET-201ENST00000340058 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
RET-201ENST00000340058 AAMPQ13685 434 aa17.91■□□□□ 0.46
RET-201ENST00000340058 RUFY2Q8WXA3 655 aa17.91■□□□□ 0.46
RET-201ENST00000340058 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
RET-201ENST00000340058 DNAJC2Q99543 621 aaKnown RBP17.91■□□□□ 0.46
RET-201ENST00000340058 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
RET-201ENST00000340058 H3BQV1 296 aa17.91■□□□□ 0.46
RET-201ENST00000340058 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
RET-201ENST00000340058 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
RET-201ENST00000340058 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
RET-201ENST00000340058 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
RET-201ENST00000340058 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
RET-201ENST00000340058 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
RET-201ENST00000340058 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
RET-201ENST00000340058 WDR7Q9Y4E6 1490 aa17.9■□□□□ 0.46
RET-201ENST00000340058 RLBP1P12271 317 aa17.9■□□□□ 0.46
RET-201ENST00000340058 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
RET-201ENST00000340058 SF3A1Q15459 793 aaKnown RBP17.9■□□□□ 0.46
RET-201ENST00000340058 SYAP1Q96A49 352 aaPredicted RBP17.89■□□□□ 0.45
RET-201ENST00000340058 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
RET-201ENST00000340058 MBIPQ9NS73 344 aa17.89■□□□□ 0.45
RET-201ENST00000340058 GNAT3A8MTJ3 354 aa17.89■□□□□ 0.45
RET-201ENST00000340058 TSHZ3Q63HK5 1081 aa17.89■□□□□ 0.45
RET-201ENST00000340058 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
RET-201ENST00000340058 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
RET-201ENST00000340058 LRPPRCP42704 1394 aaKnown RBP17.88■□□□□ 0.45
RET-201ENST00000340058 WASHC4Q2M389 1173 aa17.88■□□□□ 0.45
RET-201ENST00000340058 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms