RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
SDCBP2-201ENST00000339987 TTC21BQ7Z4L5 1316 aa24.51■■□□□ 1.51
SDCBP2-201ENST00000339987 TTC21AQ8NDW8 1320 aa24.51■■□□□ 1.51
SDCBP2-201ENST00000339987 CGNL1Q0VF96 1302 aa24.5■■□□□ 1.51
SDCBP2-201ENST00000339987 SBNO1A3KN83 1393 aa24.5■■□□□ 1.51
SDCBP2-201ENST00000339987 NPC1L1Q9UHC9 1359 aa24.5■■□□□ 1.51
SDCBP2-201ENST00000339987 PIP4K2BP78356 416 aa24.5■■□□□ 1.51
SDCBP2-201ENST00000339987 SOS2Q07890 1332 aaPredicted RBP24.49■■□□□ 1.51
SDCBP2-201ENST00000339987 AMER1Q5JTC6 1135 aaPredicted RBP24.49■■□□□ 1.51
SDCBP2-201ENST00000339987 DDX17Q92841 729 aaKnown RBP24.49■■□□□ 1.51
SDCBP2-201ENST00000339987 XPCQ01831 940 aaPredicted RBP24.47■■□□□ 1.51
SDCBP2-201ENST00000339987 NSD2O96028 1365 aa24.47■■□□□ 1.51
SDCBP2-201ENST00000339987 KIF20BQ96Q89 1820 aa24.47■■□□□ 1.51
SDCBP2-201ENST00000339987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.46■■□□□ 1.51
SDCBP2-201ENST00000339987 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
SDCBP2-201ENST00000339987 ALS2Q96Q42 1657 aa24.44■■□□□ 1.5
SDCBP2-201ENST00000339987 PIK3C2AO00443 1686 aa24.44■■□□□ 1.5
SDCBP2-201ENST00000339987 FYB1O15117 783 aa24.44■■□□□ 1.5
SDCBP2-201ENST00000339987 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
SDCBP2-201ENST00000339987 PAK3O75914 559 aaPredicted RBP24.43■■□□□ 1.5
SDCBP2-201ENST00000339987 DIEXFQ68CQ4 756 aaKnown RBP24.43■■□□□ 1.5
SDCBP2-201ENST00000339987 NME9Q86XW9 330 aa24.43■■□□□ 1.5
SDCBP2-201ENST00000339987 USP31Q70CQ4 1352 aa24.43■■□□□ 1.5
SDCBP2-201ENST00000339987 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
SDCBP2-201ENST00000339987 SPATA31A3Q5VYP0 1347 aa24.42■■□□□ 1.5
SDCBP2-201ENST00000339987 USP54Q70EL1 1684 aa24.42■■□□□ 1.5
SDCBP2-201ENST00000339987 ANKRD26Q9UPS8 1709 aa24.42■■□□□ 1.5
SDCBP2-201ENST00000339987 COL16A1Q07092 1604 aaPredicted RBP24.4■■□□□ 1.5
SDCBP2-201ENST00000339987 OVOS2A0A0J9YW53 1432 aa24.39■■□□□ 1.5
SDCBP2-201ENST00000339987 OVOS2Q6IE36 1432 aa24.39■■□□□ 1.5
SDCBP2-201ENST00000339987 ARHGEF10O15013 1369 aa24.39■■□□□ 1.5
SDCBP2-201ENST00000339987 ABTB2Q8N961 1025 aa24.39■■□□□ 1.5
SDCBP2-201ENST00000339987 SOCS7O14512 581 aa24.38■■□□□ 1.49
SDCBP2-201ENST00000339987 CC2D1BQ5T0F9 858 aaKnown RBP24.38■■□□□ 1.49
SDCBP2-201ENST00000339987 GGNBP2Q9H3C7 697 aa24.38■■□□□ 1.49
SDCBP2-201ENST00000339987 LRRC59Q96AG4 307 aaKnown RBP24.37■■□□□ 1.49
SDCBP2-201ENST00000339987 MARF1Q9Y4F3 1742 aaKnown RBP24.36■■□□□ 1.49
SDCBP2-201ENST00000339987 COG3Q96JB2 828 aa24.35■■□□□ 1.49
SDCBP2-201ENST00000339987 ZRANB1Q9UGI0 708 aa24.35■■□□□ 1.49
SDCBP2-201ENST00000339987 PARD3Q8TEW0 1356 aa24.35■■□□□ 1.49
SDCBP2-201ENST00000339987 NLRP6P59044 892 aa24.35■■□□□ 1.49
SDCBP2-201ENST00000339987 NLRP13Q86W25 1043 aa24.35■■□□□ 1.49
SDCBP2-201ENST00000339987 MED1Q15648 1581 aaPredicted RBP24.34■■□□□ 1.49
SDCBP2-201ENST00000339987 USP19O94966 1318 aa24.33■■□□□ 1.49
SDCBP2-201ENST00000339987 ANP32CO43423 234 aa24.33■■□□□ 1.49
SDCBP2-201ENST00000339987 RALBP1Q15311 655 aa24.33■■□□□ 1.49
SDCBP2-201ENST00000339987 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
SDCBP2-201ENST00000339987 MORC1Q86VD1 984 aa24.33■■□□□ 1.49
SDCBP2-201ENST00000339987 PRKRIP1Q9H875 184 aaPredicted RBP24.32■■□□□ 1.48
SDCBP2-201ENST00000339987 SLIT3O75094 1523 aa24.31■■□□□ 1.48
SDCBP2-201ENST00000339987 NUTM2GQ5VZR2 741 aa24.31■■□□□ 1.48
SDCBP2-201ENST00000339987 COL22A1Q8NFW1 1626 aaPredicted RBP24.3■■□□□ 1.48
SDCBP2-201ENST00000339987 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
SDCBP2-201ENST00000339987 CNGB1Q14028 1251 aaPredicted RBP24.29■■□□□ 1.48
SDCBP2-201ENST00000339987 CRYBG1Q9Y4K1 1723 aa24.29■■□□□ 1.48
SDCBP2-201ENST00000339987 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
SDCBP2-201ENST00000339987 AATKQ6ZMQ8 1374 aa24.27■■□□□ 1.48
SDCBP2-201ENST00000339987 HSPA1LP34931 641 aa24.27■■□□□ 1.48
SDCBP2-201ENST00000339987 SHPRHQ149N8 1683 aa24.26■■□□□ 1.47
SDCBP2-201ENST00000339987 KCNH5Q8NCM2 988 aa24.26■■□□□ 1.47
SDCBP2-201ENST00000339987 NFAT5O94916 1531 aa24.24■■□□□ 1.47
SDCBP2-201ENST00000339987 ABCA3Q99758 1704 aa24.24■■□□□ 1.47
SDCBP2-201ENST00000339987 JCADQ9P266 1359 aa24.24■■□□□ 1.47
SDCBP2-201ENST00000339987 MYBBP1AQ9BQG0 1328 aaKnown RBP24.23■■□□□ 1.47
SDCBP2-201ENST00000339987 GCP02774 474 aa24.22■■□□□ 1.47
SDCBP2-201ENST00000339987 PPP2R1AP30153 589 aa24.21■■□□□ 1.47
SDCBP2-201ENST00000339987 TNNT2P45379 298 aaPredicted RBP24.21■■□□□ 1.47
SDCBP2-201ENST00000339987 CABLES1Q8TDN4 633 aa24.19■■□□□ 1.46
SDCBP2-201ENST00000339987 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
SDCBP2-201ENST00000339987 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
SDCBP2-201ENST00000339987 CPDO75976 1380 aa24.17■■□□□ 1.46
SDCBP2-201ENST00000339987 SOX12O15370 315 aa24.17■■□□□ 1.46
SDCBP2-201ENST00000339987 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
SDCBP2-201ENST00000339987 FBLN1P23142 703 aa24.17■■□□□ 1.46
SDCBP2-201ENST00000339987 POLKQ9UBT6 870 aa24.17■■□□□ 1.46
SDCBP2-201ENST00000339987 MIER1Q8N108 512 aa24.16■■□□□ 1.46
SDCBP2-201ENST00000339987 KIF24Q5T7B8 1368 aa24.15■■□□□ 1.46
SDCBP2-201ENST00000339987 MAP3K19Q56UN5 1328 aa24.15■■□□□ 1.46
SDCBP2-201ENST00000339987 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
SDCBP2-201ENST00000339987 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
SDCBP2-201ENST00000339987 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
SDCBP2-201ENST00000339987 SPATA31A6Q5VVP1 1343 aa24.14■■□□□ 1.46
SDCBP2-201ENST00000339987 LTN1O94822 1766 aa24.14■■□□□ 1.45
SDCBP2-201ENST00000339987 MTHFSP49914 203 aa24.13■■□□□ 1.45
SDCBP2-201ENST00000339987 EMILIN1Q9Y6C2 1016 aa24.13■■□□□ 1.45
SDCBP2-201ENST00000339987 RTL1A6NKG5 1358 aa24.13■■□□□ 1.45
SDCBP2-201ENST00000339987 ABCC6O95255 1503 aa24.12■■□□□ 1.45
SDCBP2-201ENST00000339987 CDK12Q9NYV4 1490 aaPredicted RBP24.12■■□□□ 1.45
SDCBP2-201ENST00000339987 PEAK1Q9H792 1746 aa24.12■■□□□ 1.45
SDCBP2-201ENST00000339987 KIAA0232Q92628 1395 aa24.11■■□□□ 1.45
SDCBP2-201ENST00000339987 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
SDCBP2-201ENST00000339987 INSRP06213 1382 aa24.1■■□□□ 1.45
SDCBP2-201ENST00000339987 FLT4P35916 1363 aa24.1■■□□□ 1.45
SDCBP2-201ENST00000339987 CCER2I3L3R5 266 aa24.1■■□□□ 1.45
SDCBP2-201ENST00000339987 AMPHP49418 695 aa24.08■■□□□ 1.44
SDCBP2-201ENST00000339987 IP6K1Q92551 441 aa24.08■■□□□ 1.44
SDCBP2-201ENST00000339987 COL18A1P39060 1754 aa24.08■■□□□ 1.44
SDCBP2-201ENST00000339987 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
SDCBP2-201ENST00000339987 HOXC9P31274 260 aa24.07■■□□□ 1.44
SDCBP2-201ENST00000339987 CFAP53Q96M91 514 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms